mRNA_Ecto-sp13_S_contig6024.16641.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6024.16641.1
Unique NamemRNA_Ecto-sp13_S_contig6024.16641.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: D7FVV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV0_ECTSI)

HSP 1 Score: 1487 bits (3850), Expect = 0.000e+0
Identity = 907/1149 (78.94%), Postives = 931/1149 (81.03%), Query Frame = 1
Query:    1 NPQRRQSREGYAIFLHFFSHFSAAFSALNAR*EASYQMTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD---NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITRRSSXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATIRTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFHELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAALLSQGQPSSEAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQLDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNGAQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGASMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAATKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSRGRGTSESYLSNRGIGEGGEKSGARSKGERXXXXXXRASAAASSDLSEDEGSMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDGGEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQGTAKTQGTKSQRHASRGVKSRGSSGASSADDGREGSAETKAAPPTAAVSPIRRLFGGFGGLKKKA 3438
            NPQRRQSR   ++ LH FS FSAA SALN R EASYQM STASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD   NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPS+ RLDIWRLLLKHTA                                           VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKAT NIPE F+HFLVPLCAVIT RSS  XXXXXXXXXXXXXXXXXXSLREQEID+MIERLVEMFEGALEAGLEGLVD KELPGGTGVSGSGAGGV+T R KKSARSPKTATRAAETKE+SGDGRG ADN+VLPDWVDKSYGVLV GF  LLDHV RVHLGLAVAA PSE NKGD+GKTGDGR NT D SSSAVGET A                                     RRAALLSQGQPSSEAPSL                          LPEVTE QARVALWALLEPLVT+GLVGHLGADACLFAWDQAVIAGF VMLPRVAAMV+AAAADKLGACLTFAVMSEAL SH HLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEI GPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHR QTKERIQLDLSRTAVRGSSRG SN SNASLGFDDDDDAGRSN TKD+PR SKARGNGAQGRDKGK  RGDEKQ SGAKKN SS+AP HRNGS  PSA AENAG+AGAS S+FTRTRTRGRNASNALART S AV AEA TASKK GVKNTK+KLSAATKRQASVRST KDD+EDT                                GR TSESY SNRG GEGGEKS ARSKGERXXXXXX      SSDLSEDEGSMT+DGQSGNKGG SPT+ST V+KV  SDRGKDKKKQDGKG QLASADDGGEKVIRRSE+AKA+ KTSSSRRTLSRSHERSSQRDGD RRETKQGTAK QGTKSQRHASRGVK+RGSSGA SADD  + SAETKAAPPTAAVSPIRRLFGGFGGLKKKA
Sbjct:    2 NPQRRQSR-ARSVVLHLFSQFSAAPSALNVREEASYQMASTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSTANREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSRARLDIWRLLLKHTA-------------------------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATTNIPEPFVHFLVPLCAVITGRSSYSXXXXXXXXXXXXXXXXXXSLREQEIDIMIERLVEMFEGALEAGLEGLVDQKELPGGTGVSGSGAGGVSTTRAKKSARSPKTATRAAETKENSGDGRGGADNIVLPDWVDKSYGVLVPGFRGLLDHVTRVHLGLAVAAVPSEGNKGDNGKTGDGRINTADGSSSAVGETGASNAATDGQQQQPQENQQRGQDSATQPTSPRRTSSATSRRAALLSQGQPSSEAPSLXXXXXXXXXXXXXXXXXXXXXXXXXXLPEVTESQARVALWALLEPLVTVGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLGACLTFAVMSEALFSHAHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEITGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSSNDSNASLGFDDDDDAGRSNGTKDEPRASKARGNGAQGRDKGKAPRGDEKQSSGAKKNTSSNAPPHRNGSSGPSATAENAGKAGASKSDFTRTRTRGRNASNALARTSSTAVEAEAATASKKPGVKNTKQKLSAATKRQASVRSTRKDDNEDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDTSESYSSNRGNGEGGEKSAARSKGERXXXXXXXXXXXESSDLSEDEGSMTVDGQSGNKGGSSPTMSTPVAKVHASDRGKDKKKQDGKGTQLASADDGGEKVIRRSERAKADNKTSSSRRTLSRSHERSSQRDGDRRRETKQGTAKAQGTKSQRHASRGVKTRGSSGAPSADDDSDRSAETKAAPPTAAVSPIRRLFGGFGGLKKKA 1106          
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: A0A6H5KX11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX11_9PHAE)

HSP 1 Score: 1355 bits (3507), Expect = 0.000e+0
Identity = 870/1080 (80.56%), Postives = 897/1080 (83.06%), Query Frame = 1
Query:   16 QSREGYAIFLHFFSHFSAAFSALNAR*EASYQMTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD---NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITRRSSXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATIRTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFHELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAALLSQGQPSSEAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQLDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNGAQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGASMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAATKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSRGRGTSESYLSNRGIGEGGEKSGARSKGERXXXXXXRASAAASSDLSEDEGSMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDGGEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQG 3246
            +SR  YAIFL  FS FSAA SALN R EASYQM  TAS MGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD   NREGTEEAQYLD ILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSK RLDIWRLLLKHTA                                           VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVIT +S XXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKEL G T                             ETKE+SGDGRG ADN+VLPDWV+KSYGVLV GF  LLDHVARVHLGL VAAAPSE NKGD+GKTGDGR NT DSSSSAVGE+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AALL QGQPSSEAPSLGKG+DGVDMPSSSRT           LPEVTE QARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGF VMLPRVAAMV+AAAADKL ACLTFAVMSEAL+SH HLVST QLQELMEAHCMP IRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHR QTKERIQLDLSRTAVRGSSRG SN SNASLGFDDD    RSN TKDKPR SKARGNGAQGR+KG   R DE Q SGAKKN SS+AP HRNGS  P+AIAEN G+AGAS SEFTR       ASNALART SAAV AEATTASKKL VKNTK++LSAATK QA VRSTGKDD+ED ESQTEGSS+QISSNDGG +EQRHDQK+RRRSRGRGTSESY  N       EKS  RSKGER      RASAA SS+LSEDE SMT+DGQSGNKGGRSPT+STSV KV VSDRGKDKKKQDGKGKQLA ADDGGEKVI+ SE+AKA+ KTSSSRRT+SRSHERSSQRDG TRRET QG
Sbjct:   78 RSRARYAIFLPLFSQFSAALSALNVREEASYQMIPTASGMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSAANREGTEEAQYLDHILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKARLDIWRLLLKHTA-------------------------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITTKSXXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELSGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKENSGDGRGGADNIVLPDWVNKSYGVLVPGFRGLLDHVARVHLGLTVAAAPSEGNKGDNGKTGDGRVNTADSSSSAVGESGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPQGQPSSEAPSLGKGADGVDMPSSSRTXXXXXXXXXAPLPEVTESQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLEACLTFAVMSEALLSHAHLVSTPQLQELMEAHCMPLIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSSNDSNASLGFDDDXXX-RSNDTKDKPRASKARGNGAQGREKGTRQRRDESQSSGAKKNMSSNAPPHRNGSPGPNAIAENDGKAGASRSEFTRXXXXXXXASNALARTSSAAVEAEATTASKKLDVKNTKKELSAATKWQARVRSTGKDDNEDYESQTEGSSQQISSNDGGHSEQRHDQKSRRRSRGRGTSESYSLNXXXXXXSEKSAVRSKGERRNSRSRRASAAESSNLSEDERSMTVDGQSGNKGGRSPTMSTSVVKVRVSDRGKDKKKQDGKGKQLAPADDGGEKVIQLSERAKADNKTSSSRRTVSRSHERSSQRDGYTRRETNQG 1113          
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: UPI001EE520DF (uncharacterized protein LOC124253527 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE520DF)

HSP 1 Score: 86.7 bits (213), Expect = 1.610e-13
Identity = 68/243 (27.98%), Postives = 114/243 (46.91%), Query Frame = 1
Query:  151 PAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDNREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLE-SGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKAT 876
            P W+++ +E+I +S  W     +L + +   L    + +F+DLS  E+   +E A + I  E   V+ A   + S   D  + ++   +++ D    T+     D ++DSA EGA+SLLR  P E    L +  NQ +P   R   WRL L +   R+EY  ++ ++  + IS  D+ I+ +C+        +  S     +  GSV +             MK VLSYHHA + T +  + T
Sbjct:    7 PKWLLDCKEDITKSKEWNAFLHELHDAIQQQLTESHVQYFTDLSEAEKELFMERATKAI--EGGSVFAALSRKVSSMTDQHLNEDVAKQLMDDFPLSTKS----DLVIDSAEEGALSLLRRWP-EMKAKLHVCFNQPLPEAIRQLAWRLYLNNPKLRKEYIDILNRDPRAAISPDDLEISQKCE-------QLLASESTFADIQGSVGA----------FYAMKAVLSYHHARQKTHKRLQDT 225          
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: A0A7S1C4T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4T7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.530e-5
Identity = 51/148 (34.46%), Postives = 65/148 (43.92%), Query Frame = 1
Query: 1708 PEVTEYQA------RVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVL-AAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATD--ILDSAYSKRTREAQ 2124
            P+ TE+         VAL AL  P     LVG L  DA LFAWDQ V+ GFDV +PRV A VL     + L A     VM        H V   +L+  M A  MP +R+ + V        + P      D  + D    + T+E Q
Sbjct:   63 PQPTEWDVVPNPDTEVALAALFAPHFNRALVGTLPMDALLFAWDQCVMVGFDVAVPRVLACVLHLLRREVLDATSVEGVMRVFKERAPH-VPADELRGAMHALFMPGLRRRLGVDVAAYVADVAPPFPAPLDKFLADPPPEQTTQETQ 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVV0_ECTSI0.000e+078.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX11_9PHAE0.000e+080.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001EE520DF1.610e-1327.98uncharacterized protein LOC124253527 n=2 Tax=Halio... [more]
A0A7S1C4T7_9STRA4.530e-534.46Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6024contigEcto-sp13_S_contig6024:1053..7333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score97.8
Seed ortholog evalue3.3e-17
Seed eggNOG ortholog157072.XP_008877317.1
Model size3441
Hectar predicted targeting categoryother localisation
Exons9
EggNOG OGs2CN9E@1,2QUN2@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_002240.1
Cds size3330
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6024.16641.1prot_Ecto-sp13_S_contig6024.16641.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6024 1164..7333 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463838.867321-UTR-Ecto-sp13_S_contig6024:1052..11631681463838.867321-UTR-Ecto-sp13_S_contig6024:1052..1163Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6024 1053..1163 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463838.8822587-CDS-Ecto-sp13_S_contig6024:1163..12561681463838.8822587-CDS-Ecto-sp13_S_contig6024:1163..1256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 1164..1256 +
1681463838.8958578-CDS-Ecto-sp13_S_contig6024:1601..17421681463838.8958578-CDS-Ecto-sp13_S_contig6024:1601..1742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 1602..1742 +
1681463838.9065487-CDS-Ecto-sp13_S_contig6024:2029..20941681463838.9065487-CDS-Ecto-sp13_S_contig6024:2029..2094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 2030..2094 +
1681463838.9176667-CDS-Ecto-sp13_S_contig6024:2585..27901681463838.9176667-CDS-Ecto-sp13_S_contig6024:2585..2790Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 2586..2790 +
1681463838.9290376-CDS-Ecto-sp13_S_contig6024:3180..32711681463838.9290376-CDS-Ecto-sp13_S_contig6024:3180..3271Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 3181..3271 +
1681463838.942176-CDS-Ecto-sp13_S_contig6024:3746..50021681463838.942176-CDS-Ecto-sp13_S_contig6024:3746..5002Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 3747..5002 +
1681463838.9535203-CDS-Ecto-sp13_S_contig6024:5304..54691681463838.9535203-CDS-Ecto-sp13_S_contig6024:5304..5469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 5305..5469 +
1681463838.9645278-CDS-Ecto-sp13_S_contig6024:5779..68951681463838.9645278-CDS-Ecto-sp13_S_contig6024:5779..6895Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 5780..6895 +
1681463838.9757388-CDS-Ecto-sp13_S_contig6024:7135..73331681463838.9757388-CDS-Ecto-sp13_S_contig6024:7135..7333Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6024 7136..7333 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6024.16641.1

>prot_Ecto-sp13_S_contig6024.16641.1 ID=prot_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1110bp
MTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGL
GHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEAR
ARVVQDNREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQA
VPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATP
HVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKR
GQKATANIPESFLHFLVPLCAVITRRSSYSSSSSSSSASATTTTAAASSL
REQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATI
RTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFH
ELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRA
SNAATDEQQHQPQENQQQGQDRATQPPSPRRTSAATSRRAALLSQGQPSS
EAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEP
LVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACL
TFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGP
TLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQ
LDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNG
AQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGA
SMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAA
TKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSR
GRGTSESYLSNRGIGEGGEKSGARSKGERRNSRSRRASAAASSDLSEDEG
SMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDG
GEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQGTAKTQ
GTKSQRHASRGVKSRGSSGASSADDGREGSAETKAAPPTAAVSPIRRLFG
GFGGLKKKA*
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mRNA from alignment at Ecto-sp13_S_contig6024:1053..7333+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6024.16641.1 ID=mRNA_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:1053..7333+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACCCCCAAAGACGACAGTCCCGCGAGGGGTATGCAATCTTCCTCCATTT TTTCTCGCATTTCTCGGCGGCGTTCAGCGCCCTGAACGCCCGCTAGGAGG CCTCGTACCAGATGACATCGACAGCCTCTAGCATGGGCGCTGTCGGTACG CCGGCTTGGGTCGTTAACGTCAGAGAGGAGATCGGTCGTTCGCCGGCGTG GGAGGTGCGCGGTGAAACCTGTCTCTTTTGGATACTGCTGTCGAAGGTCG GAACGAAAGATCCTGTACCCTGAGAAAGCGCAGCAGACTTGGATGCGGTA TGCACATGTCTTTCATCGGCACTCCAATACTCAAAGGCGGTGCTGTGCTG ACTTGTCCAACTGGACGCGACTGCCGGCGAATCTGCAACAAGAACGCAAG TTTTGGCGCTGAGATAAAACATGTTTAGGGTTTGTCGGAGGCGGCGGTAT GGTATCTACAGTACATGTAGACTACATTCTACTGCTGTCATCAGACACAC GCACCGCTCCTCTACCTGTTAGCGCGCACCGTTTTTCAATGTAAAACAGG TCCTTTCTGATCAGCTATTTGAGCGGGTGTCTACCGTGCTCAAGTCGCAT GGCTTGGGACATTTTTCGGACCTGTCTTCGCCGGAGCAGATCACACTTCT TGAAGAAGCGCACCGCGACATCATGTCCGAGAACAACAAAGTGAGCTGCC GGAAATAGTGTGGTTTACGCATTCCATCACGCGCATATCTGCGTCGCCCT AAACCAGGATGTGGTGCTTTTGAGGGTAACTTTTCAGCCGTATGATACCA GCCACCCCTATGGCCTTGTTCCTTTGAAGCCTAGTCTAAACGGTTAGGTT CGATTAAGAATTGACAAGGATCGGGACACTTTTTACCGTACATGCCATTG AGGTCAGCCCTACCTAATAGAGTCCAGAGGGGTGACTCCGGATCCTTGAT CTGGACAGCTCTGTTCGCTCTACGCAGGTGTATCAGGCATTCGAGTCGCA GTTCAGCAAGTCCATGGACGCAGAGATCGCTAAGGAAGCCAGGTACGACC AGAGACAGCCCGAGTGGAGTGCCGAGTTGGCTGTCGAATGCAGCTTTGTT CGGAGCGAAGTTCAAGCATTGTGTACCACATGGAGGCAAACGCTCCCTTG ATCAGAATGGTGTCAGATTTTCGCCTGAACCTTTTTAAACGACTGCCTTA GGGCATCCCGAAACATCCCGCGCCACCGCGTCACGAGCACCAACTTACCC CATAGTACTGCCAGTTCCGAGGAGGAGATCGTACTGAGAAAATACCGCCC AGCTTACATGCGTCTCCCTCAGAAATGCACTGACGCACAGACATGGTCGA ACACCTAGTTGGAAGCACACGCGTAGATGTCGGTGTGTATCGGCTTTCAA ATGTGTACACACCTAGTTCCCAAATGTGTACATAAAGTCTACATATAAGT GCCACACATTTTCTGCACACAGCGCTCGCTCTGCCAGCAACCACACAAAC ACCGTCAACTTCATACCCTACGCCGACTCGCAGAGCGAGAGTTGTCCAGG ACAATCGCGAAGGCACCGAGGAAGCCCAGTACCTCGATCGCATCCTAGAC TCGGCGGCTGAAGGGGCGGTGTCCCTGCTGAGAGAGCTCCCCCGGGAACA CCTAGGAAGCCTGCGCCTGATGCTCAACCAAGCGGTCCCGTCAAAGACGA GGCTGGACATCTGGCGTCTGCTCCTGAAGCACACGGCGGTGAGTTGTGCC AGCGCAAAGGATTTCGTTTACGAGGTTTCCTTCCCCACACCGGGGCGGAT GGTCTGGCAGTCGAGGGTTATTGGCACCTGGCCAGGTAGCGGTTGAAATA TGTCCTGTCTTGAATGCATTTCTGAAATCTCTTCTGTGGTCAAGCCAAGC GCGCTGTTTCCGGGGTATGCCGCAGTTCTGGTGTAGACGAACTCCCGGTA AGCCTCGTCCTCTAAAAACGCCCACTCGTTTGGTCATGGAATGGAGCTGA ATCGTCTCTCTAGGCCGAGTGGTGCCCGTGTGAAATCGGTGCGAGCTTTA CGTCGAGCCTTTTCCTCAACTGTAGGCTAGTAGCCCCGTGAAGCTCACAG CGATCAGGCCCGCATTTGACGAATGCAGGCGCGGGAAGAGTACGAGCTGC TGGTGAGGCAGAACCGAAACAGCACCATATCGGGGCAGGACATCTACATC ACTCACCGCTGCCAGGCAAGTGGTCGCACGAGATTCTTGACATCATCGAC GAGGCCATTGGTCGTCACGCCGTAGATATGAAGGGGCCTCCACACGATTG GCAGTGATATTTTCAAAGGAACACTCTCCAAGCTTATGATGTCATGTCGC AAAAACTCCACGGTATCATCCGGCTTCCCAGCTTGACTTCTACAAAACCA CGTATTAGCCCAACATAATGTCACAAGGCAAGAGACACGAGACAACACGA ACAAAGTGAGGACGTTTAAAATTGTGCGCTCTAAGCGGTGGTCCCCCATT GCTTGCCGAGTAAGGGGCGTGCCAAAGAAAACGATAAGGGACAGCGCCAA GCATGCCCATCACGCGCCCCGCGGCTGTGCTTCATACCGTACGTTTCCCA CGCCCCTCCGAAAGACGTTTCCACATGTCGGTCACCTCCACTGTACATCT CGCAACGTTACGACCTCAATCAGTTCTCATGAACATCTTGGAAGCACCGC ACGTGCGCCGAAACATTTCTCTGTCGCACAAGGTCCTCCTCGAGTCTGGG AGCGTCGCTTCGCGCCGCATCCTCCCTCTCTCAAGCCGCAATGTGGTGCT CATGAAGACGGTGCTCAGCTACCACCACGCGTGCAAGATGACCAAGCGGG GACAGAAGGCCACGGCCAACATCCCTGAGTCCTTCTTGCACTTCCTGGTA CCGTTGTGCGCCGTCATCACGAGACGATCGTCGTACTCCTCCTCCTCCAG CAGCTCCAGCGCATCAGCAACGACCACAACAGCAGCAGCGTCGAGCCTGA GAGAGCAAGAGATCGATGTAATGATCGAGAGGTTGGTTGAGATGTTCGAG GGCGCCTTGGAGGCGGGGCTGGAAGGCTTGGTTGACCCGAAAGAGTTACC GGGCGGCACCGGGGTGTCAGGCAGTGGCGCTGGAGGCGTCGCAACAATTC GAACCAAGAAATCAGCGAGGTCGCCCAAGACAGCGACCCGTGCTGCGGAA ACCAAGGAGGACAGCGGGGACGGGCGTGGCAGCGCGGACAACGTTGTCCT CCCCGACTGGGTCGACAAAAGCTACGGCGTGCTTGTGCTGGGGTTCCATG AACTGCTCGATCACGTGGCTCGCGTTCACCTGGGGCTGGCCGTAGCAGCA GCTCCATCGGAGGAAAACAAAGGTGACAGCGGTAAGACGGGGGACGGTCG AACAAACACCGACGATAGTAGTTCTTCCGCCGTCGGGGAAACCAGAGCCT CGAATGCTGCGACCGATGAGCAGCAGCATCAACCGCAGGAAAACCAGCAA CAAGGACAGGACAGGGCGACACAGCCACCATCGCCCCGGCGGACCAGCGC AGCAACAAGTCGACGCGCAGCGCTCCTGTCGCAAGGCCAACCGAGTTCCG AGGCGCCGTCACTGGGGAAAGGTTCAGATGGTGTCGATATGCCATCCTCC AGCCGGACCGACTCCACCACAGACAGCCGCACCTCCGTCCACCTGCCCGA AGTCACCGAGTACCAAGCGCGCGTTGCGTTGTGGGCCCTCTTGGAGCCCT TGGTGACCATGGGCCTCGTTGGACACCTCGGGGCAGATGCGTGTCTGTTC GCGTGGGACCAGGCGGTGATCGCCGGGTTTGACGTGATGCTGCCCCGGGT AGCCGCGATGGTGTTGGCCGCGGCTGCGGATAAGCTCGGAGCGTGCTTGA CGTTCGCGGTGATGTCAGAGGCCTTGATTTCGCATACGCACCTCGTTTCG GTGAGGTGACAGGAGGCGGGCGAGAGAGAGAGAGGGAGAGAGGGAGAGAG AGAGTGCTGGGGACGGGCAGATCAAGGGACAATCCTGGACAGGGAGAGAC AAAAGAGCCACGTGTTCTTAAAGCCCACGAAAGTATTCACCTAAGCCTTG GTTTCGACAAAAGTTGGCTGACGAGGGTCATCTATCGTGCTATGTGCGTA TTCGGTTGGCAAACGAACGTGGTGCACGGAAGATTGACGCCTACGTTGCT CAGTTTCCGGCGCCTTCTTTCGCCGTGTTGAAATCGATCCCCACACCGAC AGACCTCCCAGCTGCAGGAGCTCATGGAAGCACACTGCATGCCCTCAATT CGCAAGGAGATGCGGGTGTCTCACAAACTGTGTCCGGAGATAATCGGACC AACCCTCAAGACTGCCACCGACATACTTGACAGCGCGTACTCCAAGAGGA CGAGAGAGGCGCAGGAGGTGAGAGTCGATTTGTCCGGAGGGATCCGCCGA GAGTCTCACTTGCTTGTTGTTTGCCGTCGGCATGTAGGGCGACGACGTTG TGCCGAATGAGTGAAGCACGCATAATTTTCCCCCTGAGCACCTCTTACCC CCTTTTTTAGCACCTCCAATGAAGTAGCAGTTGAGCAAAACCTGTCATCC CTGCCACAGATGTCCAGTCTGCATTAGGGAGATTTTATCTTCTTGAGTTT GGGGACTGCAAGGCTGACTGAATTGGATTGAGGTACACTCCTCCGTATGT CTCGTGCGTTGCACGGGCATACACTAGGCTCGAAAGGCGCACGTGGAGCA CACCCTAGGCCCATCCAGGGGCGGCTCCGTGCACCGGGGTCAAACCAAGG AGCGTATCCAGCTCGATCTGTCCCGAACAGCCGTGAGAGGGTCTTCTCGT GGTGGCAGCAACGGCAGCAATGCCAGTCTTGGGTTCGACGACGACGACGA CGCCGGTCGTAGTAATGTCACGAAGGACAAGCCCAGGATCTCGAAAGCCC GGGGAAACGGAGCACAAGGACGGGACAAAGGAAAGGGGCACCGTGGCGAC GAAAAACAAGGCAGCGGTGCCAAGAAAAATGCGTCGAGTCATGCCCCCCT CCACCGAAACGGGTCATTCGATCCCTCTGCTATCGCCGAAAATGCTGGGC AGGCGGGGGCCTCAATGAGCGAATTCACCCGCACCCGCACCCGCGGTAGG AATGCCAGCAACGCGTTGGCGAGGACTGGTTCTGCTGCTGTTTTAGCCGA AGCCACAACCGCATCGAAGAAACTAGGCGTCAAGAACACCAAGCGAAAGC TCTCGGCCGCCACCAAACGGCAGGCGAGTGTTCGCAGTACGGGAAAGGAC GACAGCGAAGATACTGAGAGCCAAACCGAAGGTAGCAGCGAGCAGATTTC GAGCAACGACGGCGGCCCCAACGAACAGCGTCATGATCAGAAGACCCGAA GGAGATCGAGAGGAAGGGGCACATCGGAAAGCTACTTGTCAAACAGGGGA ATCGGCGAGGGTGGCGAGAAGTCAGGGGCACGCTCGAAAGGCGAGCGCCG AAACTCTCGGTCGAGACGAGCGTCTGCCGCTGCAAGTAGCGATCTTTCTG AGGACGAGGGGAGCATGACGATTGACGGCCAGTCCGGAAACAAAGGTGGA AGGTCTCCGACGATATCTACGTCAGTTTCAAAGGTTTGCGTCAGCGACCG TGGCAAAGACAAGAAGAAACAAGACGGAAAAGGAAAACAGTTGGCATCTG CCGATGATGGAGGGGAAAAAGTGATACGGCGGTCCGAAAAGGCAAAGGCG GAAAAGAAGACCAGCAGTAGCAGGAGGACATTATCGCGTTCCCACGAGAG AAGCAGCCAACGAGACGGAGACACGAGGAGGGAGACAAAACAGGTAAACA GCAATATGTGTAGTTCGTTGCGTCTTCTTGCTGGCACTGGTGTTTCCCGC GCTTCGTGGAAGTTGTCCCGCTGTACGCAAATATCTTTTCGCCTCAACTG CCCTTGCTTTCGGGAAATCGCACATACAGTTTCTTATGCTGGAATATTAC CGATCACGGCTTCGAAGAGCAAAGTTAGTTGTTATGAGAATTGACCTTCG ACCCTCTCTCCGCCAAAAACAACTTTACGAAAGGGCACGGCGAAGACCCA AGGGACCAAGTCGCAGAGGCACGCCAGCAGGGGTGTGAAATCCAGGGGTA GCTCCGGTGCGTCAAGTGCCGATGACGGCAGGGAAGGTTCTGCCGAGACG AAAGCAGCCCCGCCTACCGCCGCCGTGTCTCCGATCAGGAGATTGTTTGG CGGCTTCGGAGGACTCAAGAAGAAGGCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6024:1053..7333+

>mRNA_Ecto-sp13_S_contig6024.16641.1 ID=mRNA_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3330bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:1053..7333+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACATCGACAGCCTCTAGCATGGGCGCTGTCGGTACGCCGGCTTGGGT
CGTTAACGTCAGAGAGGAGATCGGTCGTTCGCCGGCGTGGGAGGTCCTTT
CTGATCAGCTATTTGAGCGGGTGTCTACCGTGCTCAAGTCGCATGGCTTG
GGACATTTTTCGGACCTGTCTTCGCCGGAGCAGATCACACTTCTTGAAGA
AGCGCACCGCGACATCATGTCCGAGAACAACAAAGTGTATCAGGCATTCG
AGTCGCAGTTCAGCAAGTCCATGGACGCAGAGATCGCTAAGGAAGCCAGA
GCGAGAGTTGTCCAGGACAATCGCGAAGGCACCGAGGAAGCCCAGTACCT
CGATCGCATCCTAGACTCGGCGGCTGAAGGGGCGGTGTCCCTGCTGAGAG
AGCTCCCCCGGGAACACCTAGGAAGCCTGCGCCTGATGCTCAACCAAGCG
GTCCCGTCAAAGACGAGGCTGGACATCTGGCGTCTGCTCCTGAAGCACAC
GGCGGCGCGGGAAGAGTACGAGCTGCTGGTGAGGCAGAACCGAAACAGCA
CCATATCGGGGCAGGACATCTACATCACTCACCGCTGCCAGGCAACACCG
CACGTGCGCCGAAACATTTCTCTGTCGCACAAGGTCCTCCTCGAGTCTGG
GAGCGTCGCTTCGCGCCGCATCCTCCCTCTCTCAAGCCGCAATGTGGTGC
TCATGAAGACGGTGCTCAGCTACCACCACGCGTGCAAGATGACCAAGCGG
GGACAGAAGGCCACGGCCAACATCCCTGAGTCCTTCTTGCACTTCCTGGT
ACCGTTGTGCGCCGTCATCACGAGACGATCGTCGTACTCCTCCTCCTCCA
GCAGCTCCAGCGCATCAGCAACGACCACAACAGCAGCAGCGTCGAGCCTG
AGAGAGCAAGAGATCGATGTAATGATCGAGAGGTTGGTTGAGATGTTCGA
GGGCGCCTTGGAGGCGGGGCTGGAAGGCTTGGTTGACCCGAAAGAGTTAC
CGGGCGGCACCGGGGTGTCAGGCAGTGGCGCTGGAGGCGTCGCAACAATT
CGAACCAAGAAATCAGCGAGGTCGCCCAAGACAGCGACCCGTGCTGCGGA
AACCAAGGAGGACAGCGGGGACGGGCGTGGCAGCGCGGACAACGTTGTCC
TCCCCGACTGGGTCGACAAAAGCTACGGCGTGCTTGTGCTGGGGTTCCAT
GAACTGCTCGATCACGTGGCTCGCGTTCACCTGGGGCTGGCCGTAGCAGC
AGCTCCATCGGAGGAAAACAAAGGTGACAGCGGTAAGACGGGGGACGGTC
GAACAAACACCGACGATAGTAGTTCTTCCGCCGTCGGGGAAACCAGAGCC
TCGAATGCTGCGACCGATGAGCAGCAGCATCAACCGCAGGAAAACCAGCA
ACAAGGACAGGACAGGGCGACACAGCCACCATCGCCCCGGCGGACCAGCG
CAGCAACAAGTCGACGCGCAGCGCTCCTGTCGCAAGGCCAACCGAGTTCC
GAGGCGCCGTCACTGGGGAAAGGTTCAGATGGTGTCGATATGCCATCCTC
CAGCCGGACCGACTCCACCACAGACAGCCGCACCTCCGTCCACCTGCCCG
AAGTCACCGAGTACCAAGCGCGCGTTGCGTTGTGGGCCCTCTTGGAGCCC
TTGGTGACCATGGGCCTCGTTGGACACCTCGGGGCAGATGCGTGTCTGTT
CGCGTGGGACCAGGCGGTGATCGCCGGGTTTGACGTGATGCTGCCCCGGG
TAGCCGCGATGGTGTTGGCCGCGGCTGCGGATAAGCTCGGAGCGTGCTTG
ACGTTCGCGGTGATGTCAGAGGCCTTGATTTCGCATACGCACCTCGTTTC
GACCTCCCAGCTGCAGGAGCTCATGGAAGCACACTGCATGCCCTCAATTC
GCAAGGAGATGCGGGTGTCTCACAAACTGTGTCCGGAGATAATCGGACCA
ACCCTCAAGACTGCCACCGACATACTTGACAGCGCGTACTCCAAGAGGAC
GAGAGAGGCGCAGGAGGCTCGAAAGGCGCACGTGGAGCACACCCTAGGCC
CATCCAGGGGCGGCTCCGTGCACCGGGGTCAAACCAAGGAGCGTATCCAG
CTCGATCTGTCCCGAACAGCCGTGAGAGGGTCTTCTCGTGGTGGCAGCAA
CGGCAGCAATGCCAGTCTTGGGTTCGACGACGACGACGACGCCGGTCGTA
GTAATGTCACGAAGGACAAGCCCAGGATCTCGAAAGCCCGGGGAAACGGA
GCACAAGGACGGGACAAAGGAAAGGGGCACCGTGGCGACGAAAAACAAGG
CAGCGGTGCCAAGAAAAATGCGTCGAGTCATGCCCCCCTCCACCGAAACG
GGTCATTCGATCCCTCTGCTATCGCCGAAAATGCTGGGCAGGCGGGGGCC
TCAATGAGCGAATTCACCCGCACCCGCACCCGCGGTAGGAATGCCAGCAA
CGCGTTGGCGAGGACTGGTTCTGCTGCTGTTTTAGCCGAAGCCACAACCG
CATCGAAGAAACTAGGCGTCAAGAACACCAAGCGAAAGCTCTCGGCCGCC
ACCAAACGGCAGGCGAGTGTTCGCAGTACGGGAAAGGACGACAGCGAAGA
TACTGAGAGCCAAACCGAAGGTAGCAGCGAGCAGATTTCGAGCAACGACG
GCGGCCCCAACGAACAGCGTCATGATCAGAAGACCCGAAGGAGATCGAGA
GGAAGGGGCACATCGGAAAGCTACTTGTCAAACAGGGGAATCGGCGAGGG
TGGCGAGAAGTCAGGGGCACGCTCGAAAGGCGAGCGCCGAAACTCTCGGT
CGAGACGAGCGTCTGCCGCTGCAAGTAGCGATCTTTCTGAGGACGAGGGG
AGCATGACGATTGACGGCCAGTCCGGAAACAAAGGTGGAAGGTCTCCGAC
GATATCTACGTCAGTTTCAAAGGTTTGCGTCAGCGACCGTGGCAAAGACA
AGAAGAAACAAGACGGAAAAGGAAAACAGTTGGCATCTGCCGATGATGGA
GGGGAAAAAGTGATACGGCGGTCCGAAAAGGCAAAGGCGGAAAAGAAGAC
CAGCAGTAGCAGGAGGACATTATCGCGTTCCCACGAGAGAAGCAGCCAAC
GAGACGGAGACACGAGGAGGGAGACAAAACAGGGCACGGCGAAGACCCAA
GGGACCAAGTCGCAGAGGCACGCCAGCAGGGGTGTGAAATCCAGGGGTAG
CTCCGGTGCGTCAAGTGCCGATGACGGCAGGGAAGGTTCTGCCGAGACGA
AAGCAGCCCCGCCTACCGCCGCCGTGTCTCCGATCAGGAGATTGTTTGGC
GGCTTCGGAGGACTCAAGAAGAAGGCGTGA
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