prot_Ecto-sp13_S_contig6016.16633.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6016.16633.1
Unique Nameprot_Ecto-sp13_S_contig6016.16633.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 2.990e-143
Identity = 222/224 (99.11%), Postives = 224/224 (100.00%), Query Frame = 0
Query:    9 VQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 232
            +QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRA+VKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD
Sbjct:  794 LQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAVVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 1017          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.770e-87
Identity = 137/222 (61.71%), Postives = 175/222 (78.83%), Query Frame = 0
Query:    9 VQGGLKNDMLSILSGEADEG-KELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECY 229
            +QG LK ++ +ILSG  ++G KE  ELP++++AD  GS +AL ++L E++SEDEYFK  CK+L +GVGE+TKSD+AIAGVSNA+VV FNV A+ +A  +AR   I+IGYY+VVY+V+D +Q +LD + SPTPDG Y GRA VKVIF+IGKVGNIAGS V DG + +G NV + R+GR+VHEG LK LKN+K D + MV GTECGIQV  FEDFQEGD IECY
Sbjct:  356 MQGDLKGNVEAILSGMLEDGAKEKMELPIVLRADGPGSAEALASSLRELVSEDEYFKVTCKVLTAGVGEVTKSDIAIAGVSNAYVVCFNVAANHQAVEDARRGDIEIGYYNVVYDVLDQVQERLDRIRSPTPDGVYIGRAQVKVIFSIGKVGNIAGSEVLDGEVRRGSNVRIMRMGRVVHEGALKVLKNVKADVEAMVAGTECGIQVSDFEDFQEGDFIECY 577          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2SSV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSV4_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.780e-70
Identity = 117/223 (52.47%), Postives = 168/223 (75.34%), Query Frame = 0
Query:   10 QGGLKNDMLSIL-SGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            Q  LK  +  +L SG A   KE+ E+PV+IKADVQGS +AL T+L E+++EDE  + K K+L S VGE+TKSDVAIAGVS A+++ FNV A+ +A  +AR  G++IGYYS+VY++++++++++ E++SPTPDGE  G+A VK++F+IGKVG IAG  V DG I K GNV V R  RIV+EG+L TLK++K D  K+  G++CG+  E +E  +EGD++ECYK+
Sbjct:  129 QADLKQSLTDMLASGGAL--KEIREVPVLIKADVQGSVEALTTSLRELVAEDEITQVKVKVLQSSVGEVTKSDVAIAGVSKAWILAFNVAANFQAQEDAREKGLEIGYYSIVYDILEEMESRMQEVLSPTPDGELVGKAEVKMVFDIGKVGKIAGCGVVDGDILKAGNVRVLRGPRIVYEGQLTTLKHVKEDVTKISAGSDCGMAFEEWEGMEEGDVVECYKI 349          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK)

HSP 1 Score: 236 bits (602), Expect = 6.920e-70
Identity = 122/224 (54.46%), Postives = 167/224 (74.55%), Query Frame = 0
Query:    9 VQGGLKNDMLSIL-SGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            ++G L++++ +I  +GEA +G E   + V+IKADVQGS +AL  +L ++ + DE  +   K+L +  GE+TKSDVA+A VS+A VV FNV A+ +A  EAR  GIDI Y S+VY+V+DD++A++ E++SPTPDGEY G+A VK +F+IGKVG IAGS V DG +  G NV V R  R++HEG + TLKNLK DAD+MV GTECGI +E FEDF+EGD+IECY +
Sbjct:  499 LEGDLRSNLRAIFETGEALDGVERKTVNVVIKADVQGSAEALADSLRQLKARDEIGEVTVKVLAAAAGEVTKSDVALASVSDALVVAFNVAANFQAQEEARERGIDITYASIVYDVLDDLEARIQEVLSPTPDGEYAGKARVKQVFDIGKVGRIAGSEVLDGRVINGANVRVLRGPRVIHEGVMGTLKNLKADADEMVAGTECGIGLEAFEDFEEGDVIECYVV 722          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.590e-63
Identity = 107/207 (51.69%), Postives = 153/207 (73.91%), Query Frame = 0
Query:   23 GEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECY 229
            G   +G E   + V+IKADVQGS +AL TAL  +   D++ +   K+L +  GEI + D+A+A VSNA V+GFNV A+ +A  +AR N I++ Y +VVY ++D+++ ++ E++SPTP+GEY G+A +  +FNIGKVGNIAGS+V DG + KG NV V R GR++HE  +KTLKN+KVD ++MV GTECGIQ++GFE+F+ GD+IE Y
Sbjct:  510 GAGLDGIERKTVNVVIKADVQGSAEALATALKALKKADDFGEVTVKVLSATPGEINQGDIALASVSNALVIGFNVAANYQAQEDARKNEIEVMYATVVYEILDEMEERMQEVLSPTPEGEYIGKAEILQVFNIGKVGNIAGSNVLDGRVKKGSNVRVMRAGRVIHETTMKTLKNVKVDVEEMVAGTECGIQLQGFEEFEVGDIIESY 716          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA)

HSP 1 Score: 212 bits (539), Expect = 6.340e-61
Identity = 105/222 (47.30%), Postives = 156/222 (70.27%), Query Frame = 0
Query:   11 GGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 232
            G ++  +LSI     D  K+  E+ V+IKADVQGS +A+ TA+S +  ED+  +   K+L SGVG++T++DVA+AGVS A ++ FNV AD  A  EAR  G++I Y++V+Y+++D ++AK+ E++SPTP+GEY G A VK++F IGKVG +AG  V DG I +GG V V R   IV++G L+TL+N+K D  +M  G ECG+  + +EDF+  D++ECY +D
Sbjct:  473 GSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVD 692          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2B294_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B294_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.010e-60
Identity = 111/225 (49.33%), Postives = 160/225 (71.11%), Query Frame = 0
Query:   10 QGGLKNDMLSILSGEAD-EGKELFE--LPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            +G LKN ++  L+   D +G++L E  + V IKADV GS +AL TAL ++  ++E  + K K+L SGVG++T+SD+AIA VSNA+ + FNV    +A  +AR   ++IGYYSVVY+V+D+++ ++ E++SPTP+G+YTG+A VK IF+IGKVG IAG +V DG + K  N  V R  RIVHEG+LKTLK++K D   M  G+ECG+  + +E+  EGD+IE Y M
Sbjct:  556 EGDLKNSVMERLTQMGDLQGEQLEEKEVHVCIKADVMGSAEALVTALKQLEMKNEIARVKVKVLLSGVGDVTQSDLAIADVSNAWTIAFNVATIYQAQEDARNKNLEIGYYSVVYDVLDEMEVRMKEVLSPTPEGDYTGKAEVKAIFDIGKVGKIAGCAVLDGEVLKSANFRVLRGPRIVHEGRLKTLKHVKEDVQSMSAGSECGVNFQDWEEMMEGDIIESYVM 780          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: K0TL50_THAOC (IF-2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TL50_THAOC)

HSP 1 Score: 189 bits (479), Expect = 8.100e-57
Identity = 98/216 (45.37%), Postives = 146/216 (67.59%), Query Frame = 0
Query:   17 MLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            M S+    A   KEL E+ V++KADVQGS +AL  +L ++  E+E  + K K+L S  G++TKSD+A+A V+    V+ FN GA+  A  +AR   + I YYSVVY+ ++ +++++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS  +DG+I KG NV V R  +I+ E K++TL+N K + D +  G ECGI +  FE+F+ GD+IE + +
Sbjct:    1 MQSVAGIFAGGQKELREICVVVKADVQGSAEALAQSLRDLKLENEEVEVKIKVLISENGDVTKSDIAVASVTPGTTVIAFNTGANAAALEDARVLDVPIEYYSVVYDAIESVESRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCQDGIIKKGSNVRVMRGDKILQESKVRTLRNFKAEVDSIQTGDECGIGLLDFEEFEVGDVIESFVV 216          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: A0A7S2PSJ2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSJ2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.860e-56
Identity = 101/223 (45.29%), Postives = 148/223 (66.37%), Query Frame = 0
Query:   10 QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            Q GL   +  + SG   E +E+    V++KADVQG+ +AL  +L+E+  E+E  +   K+L S  G+ITKSD+A+A V+ +  V+ FN GA+  A  +ARA G+ I YYSVVY+ ++ ++ ++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS   DG+I KG NV V R  +I+ E K+KTL+N K + D +  G ECGI +  +EDF+  D+IE Y +
Sbjct:  131 QSGLMESLAGLFSGGQKERREIC---VVVKADVQGAAEALARSLTELRLENEEAEVGIKVLISEAGDITKSDIAVASVTPDTTVIAFNTGANAAAQDDARALGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVMRGDKILIESKVKTLRNFKAEVDAITTGDECGIGLLDYEDFEPDDIIESYVV 350          
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Match: B5YNY2_THAPS (Bacterial protein translation initiation factor 2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNY2_THAPS)

HSP 1 Score: 194 bits (494), Expect = 4.080e-55
Identity = 103/223 (46.19%), Postives = 149/223 (66.82%), Query Frame = 0
Query:   10 QGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVS-NAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKM 231
            Q GL   +  I SG     KEL E+ V++KADVQGS +AL  +LSE+  E+E  + K K+L S  G++TKSD+A+A V+    V+ FN GA+  A  +AR  G+ I YYSVVY+ ++ ++ ++ E++SPTP+GEY G AIV+ +FNIG  GNIAGS   DG+I KG NV V R  +I+ E K++TL+N K + D +  G ECGI +  +E+F+ GD+IE + +
Sbjct:  370 QSGLMQSVAGIFSGGQ---KELREICVVVKADVQGSAEALARSLSELKLENEEVEVKIKVLISEAGDVTKSDIAVASVTPGTTVIAFNAGANVAAMDDARMLGVPIEYYSVVYDAIESVECRMQEVLSPTPEGEYVGSAIVQEVFNIGGTGNIAGSKCRDGIIKKGSNVRVLRGDKILTESKVRTLRNFKSEVDTITTGDECGIGLLDYEEFEVGDVIESFVL 589          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6016.16633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJE9_ECTSI2.990e-14399.11PTIF2, plastid translation intiation factor 2 n=2 ... [more]
A0A835ZAQ9_9STRA2.770e-8761.71P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2SSV4_9STRA1.780e-7052.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y8J2_HETAK6.920e-7054.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y1F3_9STRA1.590e-6351.69Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
W7T2T0_9STRA6.340e-6147.30Translation initiation factor if-2 n=3 Tax=Monodop... [more]
A0A7S2B294_9STRA2.010e-6049.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K0TL50_THAOC8.100e-5745.37IF-2 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2PSJ2_9STRA1.860e-5645.29Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B5YNY2_THAPS4.080e-5546.19Bacterial protein translation initiation factor 2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 140..232
e-value: 7.0E-26
score: 92.2
NoneNo IPR availablePANTHERPTHR43381:SF5TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIALcoord: 27..231
IPR023115Translation initiation factor IF- 2, domain 3PFAMPF11987IF-2coord: 32..128
e-value: 1.3E-25
score: 89.6
IPR036925Translation initiation factor IF-2, domain 3 superfamilyGENE3D3.40.50.10050coord: 28..138
e-value: 1.8E-27
score: 97.4
IPR036925Translation initiation factor IF-2, domain 3 superfamilySUPERFAMILY52156Initiation factor IF2/eIF5b, domain 3coord: 29..145
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 27..231
IPR000178Translation initiation factor aIF-2, bacterial-likePROSITEPS01176IF2coord: 189..211
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 142..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6016contigEcto-sp13_S_contig6016:705..3658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6016.16633.1mRNA_Ecto-sp13_S_contig6016.16633.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6016 705..3658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6016.16633.1 ID=prot_Ecto-sp13_S_contig6016.16633.1|Name=mRNA_Ecto-sp13_S_contig6016.16633.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MPFLTYCCVQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQ
TALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGAD
QEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAIVK
VIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVD
ADKMVMGTECGIQVEGFEDFQEGDLIECYKMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023115TIF_IF2_dom3
IPR036925TIF_IF2_dom3_sf
IPR015760TIF_IF2
IPR000178TF_IF2_bacterial-like
IPR009000Transl_B-barrel_sf