prot_Ecto-sp13_S_contig60147.16631.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60147.16631.1
Unique Nameprot_Ecto-sp13_S_contig60147.16631.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
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BLAST of mRNA_Ecto-sp13_S_contig60147.16631.1 vs. uniprot
Match: D8LSS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS6_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 8.470e-137
Identity = 260/275 (94.55%), Postives = 264/275 (96.00%), Query Frame = 0 
Query:    1 EVVELQRASLFFCELCRSCTPVRVRVDAQTPRAMWARTSRPSDGGGRDNRAGGDNSENDGSKIRAKGRKKWSSWRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSRLPRLSITSLVWAAPAKNLGDGSDLPLALRELTFDRGFNRRLVGLAWPPNXXXXXXXXXXXXELACKRRESRSRPGQPAGSTPPPPISAGGSCRGDGGHRRGKRRENDPEIVPLLPASLEELTLGKHFNKPLPPRGLXXXXXXXXXXXXXXRQHRSARHAVWPRTLKV 275
            EVVELQRASLFFCELCRSCTPVRVRVDAQTPRAMWARTSRP DGGGRDNR GGD+SENDGSK+RAKGRKKWS WRRQ  XXXXXXXXXXXXXXXXXXXXXXXXX  SRLPRLSITSLVWAAPAKNLGDGSDLPLALRELTFDRGFNRRLVGLAWPPNXXXXXXXXXXXXELAC+RRESRS PGQPAGSTPPPPI+AGGSCRGD GHRRGKRRENDPE VPLLPASLEELTLGKHFNKPLPPRGLXXXXXXXXXXXXXXRQHRS RHAVWPRTLKV
Sbjct:   52 EVVELQRASLFFCELCRSCTPVRVRVDAQTPRAMWARTSRPGDGGGRDNRGGGDSSENDGSKVRAKGRKKWSLWRRQKQXXXXXXXXXXXXXXXXXXXXXXXXXX-SRLPRLSITSLVWAAPAKNLGDGSDLPLALRELTFDRGFNRRLVGLAWPPNXXXXXXXXXXXXELACQRRESRSGPGQPAGSTPPPPIAAGGSCRGDRGHRRGKRRENDPETVPLLPASLEELTLGKHFNKPLPPRGLXXXXXXXXXXXXXXRQHRSVRHAVWPRTLKV 325
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60147.16631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSS6_ECTSI8.470e-13794.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 222..255
e-value: 3.0E-5
score: 24.1
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 125..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60147contigEcto-sp13_S_contig60147:7..831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60147.16631.1mRNA_Ecto-sp13_S_contig60147.16631.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60147 7..831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60147.16631.1 ID=prot_Ecto-sp13_S_contig60147.16631.1|Name=mRNA_Ecto-sp13_S_contig60147.16631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
EVVELQRASLFFCELCRSCTPVRVRVDAQTPRAMWARTSRPSDGGGRDNR
AGGDNSENDGSKIRAKGRKKWSSWRRQKRQKAGGAERNAGGSSNGGGGGG
GGGGAVSRLPRLSITSLVWAAPAKNLGDGSDLPLALRELTFDRGFNRRLV
GLAWPPNLRKLTFGSSFNRELACKRRESRSRPGQPAGSTPPPPISAGGSC
RGDGGHRRGKRRENDPEIVPLLPASLEELTLGKHFNKPLPPRGLLPSGLV
SLTLGRNFRQHRSARHAVWPRTLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP