prot_Ecto-sp13_S_contig601.16622.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig601.16622.1
Unique Nameprot_Ecto-sp13_S_contig601.16622.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length287
Homology
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 1.220e-180
Identity = 269/286 (94.06%), Postives = 272/286 (95.10%), Query Frame = 0
Query:    1 MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKDY 286
            MRLL CFLLARLV   LAAGFGL PGMGSGRSITAG+R TRH S CDGKHVLT RMSSV TPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENM GTWTLVYSSSQAFRSSPFFATFQALIGK GVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH RWISGVVETRSKIVNDDIGD+LEVIVD TRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFL+YVKDY
Sbjct:    1 MRLLLCFLLARLV--SLAAGFGLRPGMGSGRSITAGNRHTRHFSCCDGKHVLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH-RWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.190e-44
Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 0
Query:   92 QQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTE------LLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISP-RLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKD 285
            Q++D++LL+ RL+EL   E  EP+  ++M G+WTLVYSS + FR  P FA  QAL G      R++    A P A++G  +Q +     E      L+ R+E+  W    ++ G +ET ++IVNDDIGD LEVIV+ + V++S L +  P +     VPV +LSER FDR+PR+ L+T++LD D RV+RLPD   LIYVKD
Sbjct:    2 QRDDVELLVTRLQELVPAE--EPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPW---NYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 3.980e-27
Identity = 89/251 (35.46%), Postives = 138/251 (54.98%), Query Frame = 0
Query:   43 ISSCDG------KHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQ-ALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRL-PDRNFLIYVK 284
            +S C G      + V+   +SSV+  +D      +K  LL+  A  +RGQ+ATE+Q+ ++++++ +LE  +A    +    E + G W LVY+S +AFRSSPFF  FQ  L+G + +A  IF FTDA P A +GQA Q  + +  E +S V++ V+P ++   G V T S +        L + V+ TRV+ S L  +   L+ V VPV  + E +  R    ++ D  FLD +LRV+R  PD    +Y K
Sbjct:   11 VSQCAGLQGRVQRRVVRANVSSVAVDSD------LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGAK---GCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 5.100e-20
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 0
Query:  122 GTWTLVYSSSQAFRSSPFFATFQALI-------GKQG--------VAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDR-------LEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLF-DRIPRITLDTVFLDQDLRVSR 273
            G W L+Y++++AFR+SPFFA+F  ++       G  G        +A+ IF+FTDA P A IG A QI+      L+S V++SV+P  R   G V TRS++               LE+ V+ TRV  S     SP L++V VPV+QL ERL      R+T +  FLDQ+LRV+R
Sbjct:  163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPGLR---GTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 7.020e-20
Identity = 69/168 (41.07%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  122 GTWTLVYSSSQAFRSSPFFATFQA--LIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRW--ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDS-ILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSR-LPDRNFLIY 282
            GTW LVYSS +AFRSSPFF  FQ   L G   +A  IF++TD+ P A IG ARQ ++     L+S V+++V P       SG V T   I       RL V V  TRVS S + G++   L+++ VPV  + E L      R  + T +LD  LRV R LP++   +Y
Sbjct:   29 GTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A2V3IV97_9FLOR (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV97_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 1.820e-18
Identity = 69/221 (31.22%), Postives = 118/221 (53.39%), Query Frame = 0
Query:   69 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIG-DRLEVIVDYTRVSDSILGKISPRLE----EVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 284
            T +   LLQ AA+T+RGQ AT+AQ + +D ++  LEE+      +P + + + G W LVY++++ F+++PF                      A P  ++GQ RQ ++ D  +L + VE+  +P + W    V+T  +I    +G +RLEV V+ T ++    GKI+ R++       VPV+Q+  R+ +  P   +DT +LD+ LR+SR  +    IY +
Sbjct:   82 TALVAKLLQYAAITDRGQSATDAQVSAVDDIVMSLEEVNPNP--QPVEIDLIDGEWNLVYTAAKLFQTNPFL------------------MAAATPLLQVGQVRQRISVDEGKLSTEVEVIAFPVTSW---TVKTTGRIT--PVGAERLEVTVETTNITG---GKIADRIDLGGISFDVPVEQIYSRIRNASPETYVDTYYLDETLRISRSKEGKLYIYTR 274          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 2.440e-18
Identity = 77/241 (31.95%), Postives = 136/241 (56.43%), Query Frame = 0
Query:   60 STPADVDEITL---IKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA---GTWTLVYSSSQAFRSSPFFATFQALIGKQGV-AERIFSFTD-AFPNAKIGQARQIVNEDCTELLSRVEMSVW-----PHSRWISGVVETRSKIVNDDIGDR-LEVIVDYTRVSDSILGKISPRLEEV--RVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 284
            S P   +++T    +K+ ++ + A T RGQ+A+E   ++ D++++ + +L++   + P    N+A   GTW LVYS  + FRSSPFF   + L G     A + FS    A   ++IG+ +QI+    + L+S V++ V      P +  I+G V + +++  +  GD+ L+V V  T+VS+S + K    LE++   VPV  + ERL   +P + L+T +LD  +R+SR  D +F +Y++
Sbjct:   66 SPPESEEDVTYREKLKSEIIALGATTNRGQIASE---DEKDIVIDLVYQLES---MNPSPKTNIAASYGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQILGP--STLVSEVDLKVGTIPSLPFA--ITGTVVSDAEVTAN--GDQSLQVTVGKTKVSNSNILKFL-NLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC)

HSP 1 Score: 93.2 bits (230), Expect = 3.680e-18
Identity = 84/243 (34.57%), Postives = 125/243 (51.44%), Query Frame = 0
Query:   48 GKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDE--NMAGTWTLVYSSSQAFRSSPFFATFQALIGKQG--VAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW---ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEE--VRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRLPDRNF 279
            GKHV      S S   D      +K  L+ +A+ T RGQ AT  +QN   L+++ + +L+A   L P  D   N  G W L YSS+Q+FRSSPFF   +A +G     VAE  FS  D    A ++G+ RQI++   TEL+S  ++SV         + G V T + + +    +  E+ V  TRV  S +  I   L++  V VPV ++ E +    +P   L T ++D+ +R+SR  D NF
Sbjct:   58 GKHVEVDENESDSIIRDE-----LKRELILLASTTNRGQCATLEEQN---LVIDLVTQLEA---LNPTADPALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVRVKGCVVTSADL-SVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM)

HSP 1 Score: 91.7 bits (226), Expect = 1.400e-17
Identity = 70/218 (32.11%), Postives = 113/218 (51.83%), Query Frame = 0
Query:   69 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSD-SILGKISPRLEEVRVPVDQLSERLFD-RIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 284
            T +K  LL++AA T+RGQLAT AQ+  ++ L+  LE     +   P     + GTW LVY+S   F+++P                       A P   +GQ +Q++  D  EL++ VE++ +P    I+G V T ++ V    G+RLE++V+ T V   S+ GK+        +PV+QL  +L +  +P   LDT +LD+ +R+SR    +  +Y K
Sbjct:  160 TEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTD--SPVDTALIDGTWLLVYASKPLFKTTPLL------------------LAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFP---MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.470e-17
Identity = 81/273 (29.67%), Postives = 137/273 (50.18%), Query Frame = 0
Query:   26 GMGSGRSITAGSRQ-TRHISSCDGKHVLTIRMSSVSTPADVDEITLI-----KNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA--GTWTLVYSSSQAFRSSPFFATFQALIG--KQGVAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW-ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRV--PVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 284
            G+ S R++  GS+  T +  S    +     +S+     D+DE   I     K  LL +++++ RG+ A+   QN +  L+ +LE L       P +D  M   G W L  SS+Q FRSSPFF T +A +G   + +AE  F   D    A +IG+ RQ +  D       +E+ V+P   + + G V TR+        +  E+ V  T V  S +  ++  L+ +++  PV+Q+ ER+   +P + L T ++D+ +R++R  D NF +Y +
Sbjct:   33 GLSSERNVPVGSKLFTYYDESSPSDYDEDDLVSAKGVEVDMDEGDDIIRDELKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALN------PTEDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD7_ECTSI1.220e-18094.06PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A835ZIJ0_9STRA9.190e-4444.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0WSZ6_9CHLO3.980e-2735.46Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A0D2KT63_9CHLO5.100e-2040.00Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A7R9UZ95_9CHLO7.020e-2041.07Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A2V3IV97_9FLOR1.820e-1831.22Chromoplast-specific carotenoid-associated protein... [more]
A0A6V1MSR7_HETAK2.440e-1831.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0SUV6_THAOC3.680e-1834.57PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A1X6P059_PORUM1.400e-1732.11PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A7S2Y236_9STRA3.470e-1729.67Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.635
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 71..273
e-value: 8.6E-9
score: 35.6
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 67..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig601contigEcto-sp13_S_contig601:18747..22785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig601.16622.1mRNA_Ecto-sp13_S_contig601.16622.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig601 18747..22785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig601.16622.1 ID=prot_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKH
VLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLL
ERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQ
GVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGV
VETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSER
LFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP