mRNA_Ecto-sp13_S_contig601.16622.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig601.16622.1
Unique NamemRNA_Ecto-sp13_S_contig601.16622.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 1.220e-180
Identity = 269/286 (94.06%), Postives = 272/286 (95.10%), Query Frame = 1
Query:    1 MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKDY 858
            MRLL CFLLARLV   LAAGFGL PGMGSGRSITAG+R TRH S CDGKHVLT RMSSV TPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENM GTWTLVYSSSQAFRSSPFFATFQALIGK GVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH RWISGVVETRSKIVNDDIGD+LEVIVD TRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFL+YVKDY
Sbjct:    1 MRLLLCFLLARLV--SLAAGFGLRPGMGSGRSITAGNRHTRHFSCCDGKHVLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH-RWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.190e-44
Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 1
Query:  274 QQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTE------LLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISP-RLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKD 855
            Q++D++LL+ RL+EL   E  EP+  ++M G+WTLVYSS + FR  P FA  QAL G      R++    A P A++G  +Q +     E      L+ R+E+  W    ++ G +ET ++IVNDDIGD LEVIV+ + V++S L +  P +     VPV +LSER FDR+PR+ L+T++LD D RV+RLPD   LIYVKD
Sbjct:    2 QRDDVELLVTRLQELVPAE--EPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPW---NYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 3.980e-27
Identity = 89/251 (35.46%), Postives = 138/251 (54.98%), Query Frame = 1
Query:  127 ISSCDG------KHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQ-ALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRL-PDRNFLIYVK 852
            +S C G      + V+   +SSV+  +D      +K  LL+  A  +RGQ+ATE+Q+ ++++++ +LE  +A    +    E + G W LVY+S +AFRSSPFF  FQ  L+G + +A  IF FTDA P A +GQA Q  + +  E +S V++ V+P ++   G V T S +        L + V+ TRV+ S L  +   L+ V VPV  + E +  R    ++ D  FLD +LRV+R  PD    +Y K
Sbjct:   11 VSQCAGLQGRVQRRVVRANVSSVAVDSD------LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGAK---GCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 5.100e-20
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 1
Query:  364 GTWTLVYSSSQAFRSSPFFATFQALI-------GKQG--------VAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDR-------LEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLF-DRIPRITLDTVFLDQDLRVSR 819
            G W L+Y++++AFR+SPFFA+F  ++       G  G        +A+ IF+FTDA P A IG A QI+      L+S V++SV+P  R   G V TRS++               LE+ V+ TRV  S     SP L++V VPV+QL ERL      R+T +  FLDQ+LRV+R
Sbjct:  163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPGLR---GTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 7.020e-20
Identity = 69/168 (41.07%), Postives = 92/168 (54.76%), Query Frame = 1
Query:  364 GTWTLVYSSSQAFRSSPFFATFQA--LIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRW--ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDS-ILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSR-LPDRNFLIY 846
            GTW LVYSS +AFRSSPFF  FQ   L G   +A  IF++TD+ P A IG ARQ ++     L+S V+++V P       SG V T   I       RL V V  TRVS S + G++   L+++ VPV  + E L      R  + T +LD  LRV R LP++   +Y
Sbjct:   29 GTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A2V3IV97_9FLOR (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV97_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 1.820e-18
Identity = 69/221 (31.22%), Postives = 118/221 (53.39%), Query Frame = 1
Query:  205 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIG-DRLEVIVDYTRVSDSILGKISPRLE----EVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
            T +   LLQ AA+T+RGQ AT+AQ + +D ++  LEE+      +P + + + G W LVY++++ F+++PF                      A P  ++GQ RQ ++ D  +L + VE+  +P + W    V+T  +I    +G +RLEV V+ T ++    GKI+ R++       VPV+Q+  R+ +  P   +DT +LD+ LR+SR  +    IY +
Sbjct:   82 TALVAKLLQYAAITDRGQSATDAQVSAVDDIVMSLEEVNPNP--QPVEIDLIDGEWNLVYTAAKLFQTNPFL------------------MAAATPLLQVGQVRQRISVDEGKLSTEVEVIAFPVTSW---TVKTTGRIT--PVGAERLEVTVETTNITG---GKIADRIDLGGISFDVPVEQIYSRIRNASPETYVDTYYLDETLRISRSKEGKLYIYTR 274          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 2.440e-18
Identity = 77/241 (31.95%), Postives = 136/241 (56.43%), Query Frame = 1
Query:  178 STPADVDEITL---IKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA---GTWTLVYSSSQAFRSSPFFATFQALIGKQGV-AERIFSFTD-AFPNAKIGQARQIVNEDCTELLSRVEMSVW-----PHSRWISGVVETRSKIVNDDIGDR-LEVIVDYTRVSDSILGKISPRLEEV--RVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
            S P   +++T    +K+ ++ + A T RGQ+A+E   ++ D++++ + +L++   + P    N+A   GTW LVYS  + FRSSPFF   + L G     A + FS    A   ++IG+ +QI+    + L+S V++ V      P +  I+G V + +++  +  GD+ L+V V  T+VS+S + K    LE++   VPV  + ERL   +P + L+T +LD  +R+SR  D +F +Y++
Sbjct:   66 SPPESEEDVTYREKLKSEIIALGATTNRGQIASE---DEKDIVIDLVYQLES---MNPSPKTNIAASYGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQILGP--STLVSEVDLKVGTIPSLPFA--ITGTVVSDAEVTAN--GDQSLQVTVGKTKVSNSNILKFL-NLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC)

HSP 1 Score: 93.2 bits (230), Expect = 3.680e-18
Identity = 84/243 (34.57%), Postives = 125/243 (51.44%), Query Frame = 1
Query:  142 GKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDE--NMAGTWTLVYSSSQAFRSSPFFATFQALIGKQG--VAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW---ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEE--VRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRLPDRNF 837
            GKHV      S S   D      +K  L+ +A+ T RGQ AT  +QN   L+++ + +L+A   L P  D   N  G W L YSS+Q+FRSSPFF   +A +G     VAE  FS  D    A ++G+ RQI++   TEL+S  ++SV         + G V T + + +    +  E+ V  TRV  S +  I   L++  V VPV ++ E +    +P   L T ++D+ +R+SR  D NF
Sbjct:   58 GKHVEVDENESDSIIRDE-----LKRELILLASTTNRGQCATLEEQN---LVIDLVTQLEA---LNPTADPALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVRVKGCVVTSADL-SVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM)

HSP 1 Score: 91.7 bits (226), Expect = 1.400e-17
Identity = 70/218 (32.11%), Postives = 113/218 (51.83%), Query Frame = 1
Query:  205 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSD-SILGKISPRLEEVRVPVDQLSERLFD-RIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
            T +K  LL++AA T+RGQLAT AQ+  ++ L+  LE     +   P     + GTW LVY+S   F+++P                       A P   +GQ +Q++  D  EL++ VE++ +P    I+G V T ++ V    G+RLE++V+ T V   S+ GK+        +PV+QL  +L +  +P   LDT +LD+ +R+SR    +  +Y K
Sbjct:  160 TEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTD--SPVDTALIDGTWLLVYASKPLFKTTPLL------------------LAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFP---MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353          
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.470e-17
Identity = 81/273 (29.67%), Postives = 137/273 (50.18%), Query Frame = 1
Query:   76 GMGSGRSITAGSRQ-TRHISSCDGKHVLTIRMSSVSTPADVDEITLI-----KNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA--GTWTLVYSSSQAFRSSPFFATFQALIG--KQGVAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW-ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRV--PVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
            G+ S R++  GS+  T +  S    +     +S+     D+DE   I     K  LL +++++ RG+ A+   QN +  L+ +LE L       P +D  M   G W L  SS+Q FRSSPFF T +A +G   + +AE  F   D    A +IG+ RQ +  D       +E+ V+P   + + G V TR+        +  E+ V  T V  S +  ++  L+ +++  PV+Q+ ER+   +P + L T ++D+ +R++R  D NF +Y +
Sbjct:   33 GLSSERNVPVGSKLFTYYDESSPSDYDEDDLVSAKGVEVDMDEGDDIIRDELKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALN------PTEDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD7_ECTSI1.220e-18094.06PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A835ZIJ0_9STRA9.190e-4444.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0WSZ6_9CHLO3.980e-2735.46Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A0D2KT63_9CHLO5.100e-2040.00Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A7R9UZ95_9CHLO7.020e-2041.07Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A2V3IV97_9FLOR1.820e-1831.22Chromoplast-specific carotenoid-associated protein... [more]
A0A6V1MSR7_HETAK2.440e-1831.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0SUV6_THAOC3.680e-1834.57PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A1X6P059_PORUM1.400e-1732.11PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A7S2Y236_9STRA3.470e-1729.67Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig601contigEcto-sp13_S_contig601:18747..22785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score510.0
Seed ortholog evalue7.3e-142
Seed eggNOG ortholog2880.D7FQD7
Model size861
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.PAP_fibrillin
EggNOG OGs2CY64@1,2S2BE@2759
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-01_006500.1
Cds size861
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig601.16622.1prot_Ecto-sp13_S_contig601.16622.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig601 18747..22785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463837.7326462-CDS-Ecto-sp13_S_contig601:18746..188581681463837.7326462-CDS-Ecto-sp13_S_contig601:18746..18858Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 18747..18858 -
1681463837.7443466-CDS-Ecto-sp13_S_contig601:19448..196161681463837.7443466-CDS-Ecto-sp13_S_contig601:19448..19616Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 19449..19616 -
1681463837.754785-CDS-Ecto-sp13_S_contig601:20206..205561681463837.754785-CDS-Ecto-sp13_S_contig601:20206..20556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 20207..20556 -
1681463837.7656014-CDS-Ecto-sp13_S_contig601:20908..209891681463837.7656014-CDS-Ecto-sp13_S_contig601:20908..20989Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 20909..20989 -
1681463837.7757862-CDS-Ecto-sp13_S_contig601:22121..222241681463837.7757862-CDS-Ecto-sp13_S_contig601:22121..22224Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 22122..22224 -
1681463837.7901564-CDS-Ecto-sp13_S_contig601:22738..227851681463837.7901564-CDS-Ecto-sp13_S_contig601:22738..22785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig601 22739..22785 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig601.16622.1

>prot_Ecto-sp13_S_contig601.16622.1 ID=prot_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKH
VLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLL
ERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQ
GVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGV
VETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSER
LFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKDY*
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mRNA from alignment at Ecto-sp13_S_contig601:18747..22785-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig601.16622.1 ID=mRNA_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4039bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:18747..22785- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTTGCTCTCGTGTTTTCTCCTAGCACGGCTCGTCAGGCGAGAGTA GGGCGGCATCTGGAGGGCAGCGAAAAAAATTGACAGTCCCGCCACTATCG CCTTGTTGCTCTGTCTGCTCTGTCTTGCTCTCTACTCGCCTCGTAAACGC CATCAGCCGTACTTCGCCCAGCCCCACAACAGTAGTTACACTCACCACAC GGTTCCATCTGACGGGCGAGTTGCTCTCGCATGGCTCACTATGGGTGGCA AGTGAGGCGTCGGAATACGTGTTAATAACAAATCTCTACCCGCTCGCTCA TGTGAAAGATCGTTCCCGCTCCGCTGCTCCTGCTGTCCTGCTATGTCAGC ACACACACGAATGCATGCGATGATGTGCATGGTGTGCACAGCCTACAGAG TAGCCTTCATCCTCTGATAACTCGTATCCTTCCTCCCTCGCACATCCCCT GTATCTCTCAGATACTATGCGTATCATCGATCACAGGTCGCCCTGCTGTT ACACACATGCGTTGTTCCTCCGTTTGTTTGGTTGATTTTCTGCGTCACGT GATGGCACCAGCTTGGCGGCCGGCTTCGGCCTCGGACCTGGCATGGGGAG CGGGCGAAGCATCACGGCTGGAAGTCGACAAACGCGACATATCTCTTCTT GCGACGGGAAACATGTGCGCGTACATGGCTGTTGTGGATTGGGTAGAAGT GGGCCAAATGGTTGCCGTATGTGCTAGTATATAGTGCTGTAGGTGTCATG TGCATGGCCACTCCAGTTGGGTGTGCTGTGCATGTGATCTATCGGGTACA CGTCGACGAAGCAATTGGTGTGAAAAGATGGATTCATCCTCGACAGACTT TGGGAGATAGTGAGAATAATACCCTATCTCGAACCACCACGTCTCCAATA CAAAAAACTTATCCCACCAACAACACGCGTACATGTACATGAACGACATT GTATGTACCACCTCATCGAGTTACTCGCTCAATACAATCTGCTGTTCGAG GCACCCTTCTGCCGGGAAGCGGCCGCTCCAAAATGGATCCCCAGACTCTT TGGCTTGAGCCCATCAGGTCCTTCGTAACAAACGGACCTGCTGGGCTCAC GCCAAGAGTCCGGCATTCCGTTAGGGAGTGACTGAATGCCAGACGCCTCG AACAATACTTGTTTGCCGTCGCATAAATATGGCTTTGGTTCCCCACCATT TGGAAATAGGCATTGCGGGTGGTGGCCACCGCCTTTCCCCTTGTTTTTCG CGACAATTTCTGGGCCTCTTTTTCTCGGCAGAATTTTCCTCTTTGCGCGC TCTTGCTGTTCGCCGTGATTCCTTACCGCGCATACGAACACAACTCTCCG ATTGGATTTTTTTATTCTGTAACCGTCCGCGTCAGTTGAAGCGCGGGGTG TGTTTCAAGGTGCTGCGAAGAGATAGAGACAACCGCTCGTAGTGTGCGAC AACAACAACGACAACATGTCATGGGAATGTCAGAGTTTTCAGCTGTGTGG TACCCCGCGCTTAGGTCGCAGTTGATCTGATTAGTCTGAACGTTTGAACT GTCAAAACATTCAGCTACAAGTCTCTGGGACTCTGCTTCTCAGGCAATGA TCTGATGCTCACCCATCCTTCCTTTTGCCATGTTCGTCATGTATCAGTCG GCGCAACTCACGAACTTTAGCAGATCATAGCGAACTGAAAACCTGCGTAA AGGCGTGCTCTACTCCTCCAGATGCAACCCAACTGCCGGCTTATCGCTAG TGCGGCCTACTGATACCCGTCACTAACGATTTCTTCTCTCAAGCAGGTAC TGACCATACGCATGAGCTCGGTGAGCACGCCTGCTGATGTCGACGAGATT ACTCTCATCAAGAATTCTCTGCTCCAGGTTAGTTCTTAGTTTTGAGTGCC AGGTAGACACTTGATACCCACGAGAATGGTTGTTTGATGGCCAATTCGGT CGAACGAACGAAAGGAAGAGAAACAAAAGCCAGAAGCAGAACACGAAATA GATGTTGATTTGTACCGTTGCTGCTGTGGTCGGCCGTGAGTGGTGCCCGT GGCTATCGAATGGACGGAGAAGTCTGGGATCTGAGGCCGCTCTCGGAACC ATACTTTCCCCCCACCGCTCGTGGCCGAATCCAAAGCCACCAACCATAAA ACATGTAAAGTAGGCAGGAGTAAATCTCCTACACGATCTCTTTTCATAGA GTTGAGTGTCCAACGTTCCGACCCAAAAGGTGGCGGCGATGACTGAGCGA GGGCAGCTGGCGACGGAGGCCCAGCAGAACGACATGGACCTCTTGCTGGA GCGCCTGGAAGAGTTGAAGGCGGAGGAGCTGCTCGAGCCGTACAAGGACG AGAATATGGCGGGGACCTGGACGCTCGTCTACTCGTCCTCGCAGGCGTTC CGGTCCAGCCCGTTCTTCGCAACGTTCCAGGCGCTGATCGGCAAGCAGGG CGTTGCCGAGAGGATCTTCTCCTTCACAGACGCGTTCCCCAACGCCAAGA TTGGTCAGGCGAGGCAGATCGTGAACGAGGACTGCACCGAGCTCCTGTCG CGGGTGGAGATGTCGGTCTGGCCTCACAGGTGATTCAGATGCGACGGGAG AGAGGAACAGGCGGAGAAGCTGTGTCGATCCGCGGTTGAGCCCTGTGTGC GAGCAGTGCAGTTCGGGGTATCATCCGACGCAAGATTGATTGTGCGGGAA ATCATGAGGACAATGCCAGGCGCTTGCAGCGCTGGGAGCACAGCGGTGTT TACCATCCTCACGAGATGTCGCGGAGTGTGTTCGCGTCCACACGTCACAC GTGCTTGATTCGACACCTTCACCGTGACCTTTTTCGTTTGTTGTCAGTGG CCGAATTAGAACCGCCTGCTAGTCCACCCACAACATCTCTATCCGAGACG AGCATCTCCATTGCCCCCTCTTCTTCTTTCTCCAACGAAATAGCACTAGT TGCAACGATATTCTCCTCTCGTCCCCGCCAATGCCCGCGTCAACTTGACA AAATTTTCCTCAACACTTAAACACTGACGATAACAACAGCTCGCGTACTC ACAGGCCAAGTCAGCCAGCCACCGACCGAACGCGGGCGTTTCTCACCCCA ACAGCGATCATGCTCGCCTCTTTTTTGTTTTGTCTTTTCGGATCTTGGGG CGCAACACGTGGTGCCAAGTAGATGGATATCGGGCGTAGTGGAGACGCGG TCCAAGATCGTGAACGACGACATCGGCGACCGATTGGAGGTTATCGTCGA CTACACCAGGGTTAGCGATTCCATTCTGGGCAAGATCAGCCCTCGTCTCG AGGAGGTGCGAGTGCCGGTCGACCAGCTCTCGGAGAGGTCAGTGGGGGAT CGATCCACTGGGGGAGGCAGGGAAGTTGGGTTTCTCGTAGAGTGTTGGAA GTATTCAAGAGTTTCTTCGGTGATAATGAAACCGCCCGTGAGGTGGACGG TCAGAACATTCGGCGATGACATCTCCGATCACCGAAGATTCGGGGAAACA CGGACTCAGGGCATGGACTGATGGACGACTAGTCTAGGCCTATGACCTTT CGATATTTTGTCTTAGTATACACGGGGGTGGGAGTCAAGTCTTAAACGAG CATTCCCTCCACAAATGTTTTTATCCAGCTCGCTAGCGAATGTGTCCACA ACACTTGAAGCTCTCATTTCGGTCTCCGTTGTGCACTATGGATGGCATTT TCTCGCTATCCTGCTTCATATTTTTTCATTCGTCTATGCGTATGGCCTTA TTTTTCGTGGGGGAGCCATATGGGGTTTTACTTGAGGCCGAAAAGAGCTT TTACCCGCCGCCAAGGCACATTCGGACAGTCTCGTACGTACATGATAGTT CTCGACCAATCAGCTGGCGATTTTCCTCGCTTGAATGCCTCCCGACCCTG CCGTAACTGCCCACTCCGCCCGCGCAGACTTTTCGACCGCATACCGCGCA TCACGCTGGACACGGTTTTCCTTGATCAAGATCTAAGGGTGTCTCGCCTC CCGGATAGAAATTTCCTAATTTACGTGAAGGACTACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig601:18747..22785-

>mRNA_Ecto-sp13_S_contig601.16622.1 ID=mRNA_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:18747..22785- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTTGCTCTCGTGTTTTCTCCTAGCACGGCTCGTCAGGCGAGACTT
GGCGGCCGGCTTCGGCCTCGGACCTGGCATGGGGAGCGGGCGAAGCATCA
CGGCTGGAAGTCGACAAACGCGACATATCTCTTCTTGCGACGGGAAACAT
GTACTGACCATACGCATGAGCTCGGTGAGCACGCCTGCTGATGTCGACGA
GATTACTCTCATCAAGAATTCTCTGCTCCAGGTGGCGGCGATGACTGAGC
GAGGGCAGCTGGCGACGGAGGCCCAGCAGAACGACATGGACCTCTTGCTG
GAGCGCCTGGAAGAGTTGAAGGCGGAGGAGCTGCTCGAGCCGTACAAGGA
CGAGAATATGGCGGGGACCTGGACGCTCGTCTACTCGTCCTCGCAGGCGT
TCCGGTCCAGCCCGTTCTTCGCAACGTTCCAGGCGCTGATCGGCAAGCAG
GGCGTTGCCGAGAGGATCTTCTCCTTCACAGACGCGTTCCCCAACGCCAA
GATTGGTCAGGCGAGGCAGATCGTGAACGAGGACTGCACCGAGCTCCTGT
CGCGGGTGGAGATGTCGGTCTGGCCTCACAGTAGATGGATATCGGGCGTA
GTGGAGACGCGGTCCAAGATCGTGAACGACGACATCGGCGACCGATTGGA
GGTTATCGTCGACTACACCAGGGTTAGCGATTCCATTCTGGGCAAGATCA
GCCCTCGTCTCGAGGAGGTGCGAGTGCCGGTCGACCAGCTCTCGGAGAGA
CTTTTCGACCGCATACCGCGCATCACGCTGGACACGGTTTTCCTTGATCA
AGATCTAAGGGTGTCTCGCCTCCCGGATAGAAATTTCCTAATTTACGTGA
AGGACTACTGA
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