mRNA_Ecto-sp13_S_contig601.16622.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI) HSP 1 Score: 507 bits (1306), Expect = 1.220e-180 Identity = 269/286 (94.06%), Postives = 272/286 (95.10%), Query Frame = 1
Query: 1 MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKDY 858
MRLL CFLLARLV LAAGFGL PGMGSGRSITAG+R TRH S CDGKHVLT RMSSV TPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENM GTWTLVYSSSQAFRSSPFFATFQALIGK GVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH RWISGVVETRSKIVNDDIGD+LEVIVD TRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFL+YVKDY
Sbjct: 1 MRLLLCFLLARLV--SLAAGFGLRPGMGSGRSITAGNRHTRHFSCCDGKHVLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPH-RWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA) HSP 1 Score: 157 bits (396), Expect = 9.190e-44 Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 274 QQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTE------LLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISP-RLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVKD 855
Q++D++LL+ RL+EL E EP+ ++M G+WTLVYSS + FR P FA QAL G R++ A P A++G +Q + E L+ R+E+ W ++ G +ET ++IVNDDIGD LEVIV+ + V++S L + P + VPV +LSER FDR+PR+ L+T++LD D RV+RLPD LIYVKD
Sbjct: 2 QRDDVELLVTRLQELVPAE--EPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPW---NYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO) HSP 1 Score: 115 bits (288), Expect = 3.980e-27 Identity = 89/251 (35.46%), Postives = 138/251 (54.98%), Query Frame = 1
Query: 127 ISSCDG------KHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQ-ALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRL-PDRNFLIYVK 852
+S C G + V+ +SSV+ +D +K LL+ A +RGQ+ATE+Q+ ++++++ +LE +A + E + G W LVY+S +AFRSSPFF FQ L+G + +A IF FTDA P A +GQA Q + + E +S V++ V+P ++ G V T S + L + V+ TRV+ S L + L+ V VPV + E + R ++ D FLD +LRV+R PD +Y K
Sbjct: 11 VSQCAGLQGRVQRRVVRANVSSVAVDSD------LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGAK---GCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 5.100e-20 Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 364 GTWTLVYSSSQAFRSSPFFATFQALI-------GKQG--------VAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDR-------LEVIVDYTRVSDSILGKISPRLEEVRVPVDQLSERLF-DRIPRITLDTVFLDQDLRVSR 819
G W L+Y++++AFR+SPFFA+F ++ G G +A+ IF+FTDA P A IG A QI+ L+S V++SV+P R G V TRS++ LE+ V+ TRV S SP L++V VPV+QL ERL R+T + FLDQ+LRV+R
Sbjct: 163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPGLR---GTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 7.020e-20 Identity = 69/168 (41.07%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 364 GTWTLVYSSSQAFRSSPFFATFQA--LIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRW--ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDS-ILGKISPRLEEVRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSR-LPDRNFLIY 846
GTW LVYSS +AFRSSPFF FQ L G +A IF++TD+ P A IG ARQ ++ L+S V+++V P SG V T I RL V V TRVS S + G++ L+++ VPV + E L R + T +LD LRV R LP++ +Y
Sbjct: 29 GTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A2V3IV97_9FLOR (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV97_9FLOR) HSP 1 Score: 92.8 bits (229), Expect = 1.820e-18 Identity = 69/221 (31.22%), Postives = 118/221 (53.39%), Query Frame = 1
Query: 205 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIG-DRLEVIVDYTRVSDSILGKISPRLE----EVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
T + LLQ AA+T+RGQ AT+AQ + +D ++ LEE+ +P + + + G W LVY++++ F+++PF A P ++GQ RQ ++ D +L + VE+ +P + W V+T +I +G +RLEV V+ T ++ GKI+ R++ VPV+Q+ R+ + P +DT +LD+ LR+SR + IY +
Sbjct: 82 TALVAKLLQYAAITDRGQSATDAQVSAVDDIVMSLEEVNPNP--QPVEIDLIDGEWNLVYTAAKLFQTNPFL------------------MAAATPLLQVGQVRQRISVDEGKLSTEVEVIAFPVTSW---TVKTTGRIT--PVGAERLEVTVETTNITG---GKIADRIDLGGISFDVPVEQIYSRIRNASPETYVDTYYLDETLRISRSKEGKLYIYTR 274
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 2.440e-18 Identity = 77/241 (31.95%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 178 STPADVDEITL---IKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA---GTWTLVYSSSQAFRSSPFFATFQALIGKQGV-AERIFSFTD-AFPNAKIGQARQIVNEDCTELLSRVEMSVW-----PHSRWISGVVETRSKIVNDDIGDR-LEVIVDYTRVSDSILGKISPRLEEV--RVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
S P +++T +K+ ++ + A T RGQ+A+E ++ D++++ + +L++ + P N+A GTW LVYS + FRSSPFF + L G A + FS A ++IG+ +QI+ + L+S V++ V P + I+G V + +++ + GD+ L+V V T+VS+S + K LE++ VPV + ERL +P + L+T +LD +R+SR D +F +Y++
Sbjct: 66 SPPESEEDVTYREKLKSEIIALGATTNRGQIASE---DEKDIVIDLVYQLES---MNPSPKTNIAASYGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQILGP--STLVSEVDLKVGTIPSLPFA--ITGTVVSDAEVTAN--GDQSLQVTVGKTKVSNSNILKFL-NLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC) HSP 1 Score: 93.2 bits (230), Expect = 3.680e-18 Identity = 84/243 (34.57%), Postives = 125/243 (51.44%), Query Frame = 1
Query: 142 GKHVLTIRMSSVSTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDE--NMAGTWTLVYSSSQAFRSSPFFATFQALIGKQG--VAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW---ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEE--VRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRLPDRNF 837
GKHV S S D +K L+ +A+ T RGQ AT +QN L+++ + +L+A L P D N G W L YSS+Q+FRSSPFF +A +G VAE FS D A ++G+ RQI++ TEL+S ++SV + G V T + + + + E+ V TRV S + I L++ V VPV ++ E + +P L T ++D+ +R+SR D NF
Sbjct: 58 GKHVEVDENESDSIIRDE-----LKRELILLASTTNRGQCATLEEQN---LVIDLVTQLEA---LNPTADPALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVRVKGCVVTSADL-SVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM) HSP 1 Score: 91.7 bits (226), Expect = 1.400e-17 Identity = 70/218 (32.11%), Postives = 113/218 (51.83%), Query Frame = 1
Query: 205 TLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMAGTWTLVYSSSQAFRSSPFFATFQALIGKQGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHSRWISGVVETRSKIVNDDIGDRLEVIVDYTRVSD-SILGKISPRLEEVRVPVDQLSERLFD-RIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
T +K LL++AA T+RGQLAT AQ+ ++ L+ LE + P + GTW LVY+S F+++P A P +GQ +Q++ D EL++ VE++ +P I+G V T ++ V G+RLE++V+ T V S+ GK+ +PV+QL +L + +P LDT +LD+ +R+SR + +Y K
Sbjct: 160 TEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTD--SPVDTALIDGTWLLVYASKPLFKTTPLL------------------LAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFP---MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.470e-17 Identity = 81/273 (29.67%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 76 GMGSGRSITAGSRQ-TRHISSCDGKHVLTIRMSSVSTPADVDEITLI-----KNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMA--GTWTLVYSSSQAFRSSPFFATFQALIG--KQGVAERIFSFTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHSRW-ISGVVETRSKIVNDDIGDRLEVIVDYTRVSDSILGKISPRLEEVRV--PVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLIYVK 852
G+ S R++ GS+ T + S + +S+ D+DE I K LL +++++ RG+ A+ QN + L+ +LE L P +D M G W L SS+Q FRSSPFF T +A +G + +AE F D A +IG+ RQ + D +E+ V+P + + G V TR+ + E+ V T V S + ++ L+ +++ PV+Q+ ER+ +P + L T ++D+ +R++R D NF +Y +
Sbjct: 33 GLSSERNVPVGSKLFTYYDESSPSDYDEDDLVSAKGVEVDMDEGDDIIRDELKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALN------PTEDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig601.16622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig601.16622.1 >prot_Ecto-sp13_S_contig601.16622.1 ID=prot_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp MRLLSCFLLARLVRRDLAAGFGLGPGMGSGRSITAGSRQTRHISSCDGKHback to top mRNA from alignment at Ecto-sp13_S_contig601:18747..22785- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig601.16622.1 ID=mRNA_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4039bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:18747..22785- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig601:18747..22785- >mRNA_Ecto-sp13_S_contig601.16622.1 ID=mRNA_Ecto-sp13_S_contig601.16622.1|Name=mRNA_Ecto-sp13_S_contig601.16622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:18747..22785- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |