mRNA_Ecto-sp13_S_contig601.16621.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A3R7D617_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D617_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.990e-9 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD+NRIF EQIEV +LP +LKE+TK ++R TS D+ FSL +F+ + E G G ++
Sbjct: 1 MDVNRIFSAEQIEVPPDLPLVLKEWTKDVIR---TSPDDLAVFSLQWFKDRANEQGGGSLT 58
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: T0RNZ0_SAPDV (EF-hand domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RNZ0_SAPDV) HSP 1 Score: 56.6 bits (135), Expect = 1.410e-8 Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD+NRIF EQI V LP ILKE+TK ++RA S DII FSL +FQ+K E +G +S
Sbjct: 1 MDVNRIFSAEQIAVPVELPLILKEWTKDVIRA---SPADIIAFSLHWFQEKAAEALNGKLS 58
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A024UV65_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UV65_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.950e-8 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD+NRIF EQIEV +LP +LKE+TK ++R TS D+ FSL +F+ + E G G ++
Sbjct: 1 MDVNRIFSAEQIEVPPDLPLVLKEWTKDVIR---TSPDDLAVFSLQWFKDRANELGGGSLT 58
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A1V9ZUH6_9STRA (Radial spoke protein 11 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUH6_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 5.590e-8 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD NRIF EQI V +LP ILKE+TK ++RA + D+I FSL +FQ+K E +G +S
Sbjct: 1 MDANRIFSAEQIAVPLDLPLILKEWTKDVIRA---APADVIAFSLTWFQEKAAEALNGKLS 58
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A2D4C1R7_PYTIN (Radial spoke protein 11 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R7_PYTIN) HSP 1 Score: 54.7 bits (130), Expect = 7.590e-8 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKK 153
MD+NRIF EQI V +LP +LK++TKA++R N +D+++FSL +FQ+K
Sbjct: 1 MDVNRIFSAEQIAVPPDLPHVLKDWTKAVIRGN---PEDVLQFSLQWFQEK 48
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A067D327_SAPPC (EF-hand domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D327_SAPPC) HSP 1 Score: 54.7 bits (130), Expect = 7.890e-8 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD+NRIF EQI V LP ILKE+TK ++RA S DII +SL +FQ+K + +G +S
Sbjct: 1 MDVNRIFSAEQIAVPIELPLILKEWTKDIIRA---SPADIIAYSLTWFQEKAADALNGKLS 58
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A482S723_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S723_9ARCH) HSP 1 Score: 52.8 bits (125), Expect = 1.330e-7 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEE 162
M++ RIF +QI++H L IL+EYTKA +RAN D+ FS YF+KK +E
Sbjct: 1 MEVERIFSADQIKIHPELAKILREYTKAAIRAN---PSDLYDFSWTYFKKKVDE 51
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A1V9ZV61_9STRA (Radial spoke protein 11 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV61_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 6.180e-7 Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPIS 183
MD+NRIF EQI V +LP ILKE+TK ++RA + D++ +SL +FQ+K E +G +S
Sbjct: 469 MDVNRIFSAEQIVVPLDLPLILKEWTKDVIRA---APADVVAYSLQWFQEKAAEALNGKLS 526
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A0P1AD84_PLAHL (Radial spoke protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AD84_PLAHL) HSP 1 Score: 52.4 bits (124), Expect = 6.560e-7 Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPISEQQ 192
M++NRIF EQI V +LP +LK++TKA++RAN D++ FS ++FQ+K + E Q
Sbjct: 1 MEVNRIFTAEQIAVPPDLPHVLKDWTKAVIRAN---PSDLLTFSQLWFQEKMTQLSEREAIESQ 61
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Match: A0A8K1CE23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE23_PYTOL) HSP 1 Score: 52.0 bits (123), Expect = 8.440e-7 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKKCEENGSGPISEQQ 192
MD+NRIF EQI V +LP ++KE+TK+++R N +D++ FSL +FQ K +E Q
Sbjct: 1 MDVNRIFSAEQIAVPPDLPHVIKEWTKSVIREN---PEDVLYFSLKWFQDKTNLASQKKATENQ 61 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig601.16621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig601.16621.1 >prot_Ecto-sp13_S_contig601.16621.1 ID=prot_Ecto-sp13_S_contig601.16621.1|Name=mRNA_Ecto-sp13_S_contig601.16621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp MDLNRIFMPEQIEVHKNLPGILKEYTKALLRANLTSEKDIIKFSLMYFQKback to top mRNA from alignment at Ecto-sp13_S_contig601:16135..16737+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig601.16621.1 ID=mRNA_Ecto-sp13_S_contig601.16621.1|Name=mRNA_Ecto-sp13_S_contig601.16621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:16135..16737+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig601:16135..16737+ >mRNA_Ecto-sp13_S_contig601.16621.1 ID=mRNA_Ecto-sp13_S_contig601.16621.1|Name=mRNA_Ecto-sp13_S_contig601.16621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig601:16135..16737+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |