prot_Ecto-sp13_S_contig60082.16614.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60082.16614.1
Unique Nameprot_Ecto-sp13_S_contig60082.16614.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: D8LU94_ECTSI (Coronin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU94_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 6.050e-31
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK
Sbjct:  295 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 352          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A836CNW2_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW2_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.200e-28
Identity = 51/58 (87.93%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            VDENPWCFAISE+RSTTAAKGMAM+PKRGL+VM+CETARLLKLT++S+EPLSFVVPRK
Sbjct:  295 VDENPWCFAISEYRSTTAAKGMAMVPKRGLDVMRCETARLLKLTTSSVEPLSFVVPRK 352          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A835YLY0_9STRA (Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 8.640e-26
Identity = 48/58 (82.76%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            VDENP+CFAISE+RST AAKGMAM+PKRGLN+M+CETARLLKLT++S+EPLSF+VPRK
Sbjct:  295 VDENPFCFAISEYRSTVAAKGMAMVPKRGLNIMQCETARLLKLTTSSVEPLSFMVPRK 352          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A7S2CGU3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CGU3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.510e-22
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    3 ENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            ENP+ F +SE+ STT AKGMA IPKRG NVMKCETAR LKLTSN++EPLSF+VPRK
Sbjct:    1 ENPFLFKLSEYSSTTPAKGMAFIPKRGCNVMKCETARGLKLTSNAVEPLSFIVPRK 56          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A7S3XP63_HETAK (Coronin n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP63_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 3.020e-22
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            VDE P+C  I+EFR+TTAAKGM  +PKRGL+VM+CETARLLKLTS+S+EPLSF+VPRK
Sbjct:  316 VDEAPFCIPINEFRTTTAAKGMCAVPKRGLDVMRCETARLLKLTSSSVEPLSFIVPRK 373          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A7S2F3J1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3J1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.420e-20
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            V E P  F +SEFRST AAKG+  +PKRGL+V+KCETAR LKLT N IEPL F+VPRK
Sbjct:   34 VTETPCFFRLSEFRSTVAAKGVTFLPKRGLDVLKCETARALKLTGNCIEPLKFIVPRK 91          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: W7TD57_9STRA (Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD57_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.320e-19
Identity = 39/58 (67.24%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            V E P+ F ISE+RSTT +KG  ++PKRGLNV++CETAR+LKLT++S+EPLSF+VPRK
Sbjct:  295 VSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSSVEPLSFIVPRK 352          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A7R9YBR7_9STRA (Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.230e-19
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    2 DENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            DENP+ ++ISE+RST + KGM M+PKR  +VM+CETAR LKLTSNS+ PLSF+VPRK
Sbjct:  298 DENPFSYSISEYRSTQSQKGMCMLPKRACDVMRCETARFLKLTSNSVMPLSFIVPRK 354          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: A0A7S2XV61_9STRA (Coronin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV61_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.140e-18
Identity = 39/58 (67.24%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            V+E+P+ +AI+EFR+  AAKGM M+PK GLNV K ETARLLK+TS+++EPLSF+VPRK
Sbjct:  296 VEESPFVYAINEFRTNNAAKGMGMVPKMGLNVSKNETARLLKMTSSTVEPLSFIVPRK 353          
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Match: M4BYQ8_HYAAE (Coronin n=28 Tax=Peronosporaceae TaxID=4777 RepID=M4BYQ8_HYAAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.090e-18
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    5 PWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEPLSFVVPRK 58
            P+ F ISE+RSTT+AKGMAMIPKRG ++M+CET RLLKLTSN+IEPL   VPRK
Sbjct:  300 PFAFPISEYRSTTSAKGMAMIPKRGCDIMRCETTRLLKLTSNAIEPLHVFVPRK 353          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60082.16614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU94_ECTSI6.050e-31100.00Coronin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU94... [more]
A0A836CNW2_9STRA7.200e-2887.93Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A835YLY0_9STRA8.640e-2682.76Coronin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A7S2CGU3_9STRA2.510e-2276.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3XP63_HETAK3.020e-2275.86Coronin n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
A0A7S2F3J1_9STRA9.420e-2068.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TD57_9STRA3.320e-1967.24Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
A0A7R9YBR7_9STRA7.230e-1968.42Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
A0A7S2XV61_9STRA2.140e-1867.24Coronin n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
M4BYQ8_HYAAE3.090e-1874.07Coronin n=28 Tax=Peronosporaceae TaxID=4777 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01167DUF1900_2coord: 1..58
e-value: 2.0E-6
score: 21.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..55
e-value: 1.1E-12
score: 49.6
IPR015505CoroninPANTHERPTHR10856CORONINcoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60082contigEcto-sp13_S_contig60082:537..710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60082.16614.1mRNA_Ecto-sp13_S_contig60082.16614.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60082 537..710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60082.16614.1 ID=prot_Ecto-sp13_S_contig60082.16614.1|Name=mRNA_Ecto-sp13_S_contig60082.16614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
VDENPWCFAISEFRSTTAAKGMAMIPKRGLNVMKCETARLLKLTSNSIEP
LSFVVPRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR015505Coronin