mRNA_Ecto-sp13_S_contig6007.16611.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: D7FZ10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ10_ECTSI) HSP 1 Score: 197 bits (501), Expect = 2.770e-59 Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+VGATAYLESYVDDTDVID+SHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGL+NGPTVGYCYD
Sbjct: 285 KVGATAYLESYVDDTDVIDESHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLYNGPTVGYCYD 385
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: D7G4N2_ECTSI (Similar to sodium-dependent glucose transporter 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N2_ECTSI) HSP 1 Score: 162 bits (409), Expect = 4.010e-46 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+VGA YL+ YVD+T+VI +SHAELL+VVLW AI IGRLAG+QDQRHLTL RLYRHSTILFL G AA AILVFQ+SAFVLWTGIAAYGL +GPTVGYCYD
Sbjct: 231 EVGAAGYLKRYVDETEVIGESHAELLVVVLWMAIIIGRLAGIQDQRHLTLSRLYRHSTILFLGGTTAATAILVFQNSAFVLWTGIAAYGLCDGPTVGYCYD 331
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A835ZG03_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG03_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.970e-28 Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+VGATAYL YV+DT VI + A LLIVVLW AIT+GR G+ QR T LY +T+L + GAAAAA L+F SSA VLW +A +GLFNGP++GYCYD
Sbjct: 239 KVGATAYLTQYVEDTGVIAPACASLLIVVLWAAITLGRCVGIHLQRDATPRALYAQTTLLCVAGAAAAALPLLFPSSAAVLWIAVALWGLFNGPSIGYCYD 339
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A7S2UZ78_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ78_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.290e-28 Identity = 55/101 (54.46%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+V ATAY ++ DT ++ LLI+VLW AIT GR+AG+QDQR L PRLY H + L GA A +L F SS VLW G+ YG FNGPTVGYCYD
Sbjct: 276 KVTATAYFTEFIQDTRILPFEDCALLIMVLWVAITFGRIAGIQDQRFLNRPRLYNHLCLFCLAGAIAMLLLLAFPSSRLVLWVGVGLYGFFNGPTVGYCYD 376
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A836CPE2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE2_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.790e-27 Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+VGATAYL YV DT +I D+ A LLI VLW AIT+GR+ G+Q QR +TL +L++ LF+ GAAAAA LV SA LW +A YG NGP VGYCYD
Sbjct: 271 KVGATAYLTQYVADTGIIPDARAPLLIAVLWLAITVGRILGIQAQRTITLSKLHKQCAGLFIGGAAAAALPLVLLHSAAALWIAVALYGTLNGPCVGYCYD 371
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A7S3UYE2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYE2_HETAK) HSP 1 Score: 103 bits (256), Expect = 8.680e-25 Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+V +TAY +V++TD+I A LLI VLWTAIT+GR+AG+QD R L L +LY H I + G I +F S LW G+ YG FNGPTVGY YD
Sbjct: 76 KVTSTAYFTEFVEETDLIPYDDATLLICVLWTAITLGRVAGIQDMRFLDLSKLYNHLLIFLVGGIIGMGMIALFPSLPLALWVGVGLYGFFNGPTVGYIYD 176
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A7S3UWT4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWT4_HETAK) HSP 1 Score: 103 bits (256), Expect = 1.110e-23 Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+V +TAY +V++TD+I A LLI VLWTAIT+GR+AG+QD R L L +LY H I + G I +F S LW G+ YG FNGPTVGY YD
Sbjct: 289 KVTSTAYFTEFVEETDLIPYDDATLLICVLWTAITLGRVAGIQDMRFLDLSKLYNHLLIFLVGGIIGMGMIALFPSLPLALWVGVGLYGFFNGPTVGYIYD 389
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: D8LF80_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF80_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.780e-22 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
++ ATA+L + D+T D S LLIV LW AIT+GR+ GL+DQ LTL RLYRH+ +L L GA A +LV S +LW + A+GLFNGP +GY YD
Sbjct: 273 RIAATAFLRQFADNTS--DASRRTLLIVCLWLAITLGRVLGLRDQLTLTLARLYRHAAVLCLGGAGAMFVLLVSSRSTAMLWVTVLAFGLFNGPVLGYGYD 371
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Match: A0A7S3ZN68_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZN68_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.710e-19 Identity = 47/104 (45.19%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 1 QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLP---RLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLFNGPTVGYCYD 303
+V T+Y+ +YV T V+ S A L ++VLW AIT+GRL GLQDQ +L ++ H L G A VF + WTG+A YGL NGP VGYCYD
Sbjct: 256 KVDCTSYISTYVRQTGVVAASKASLSVLVLWIAITVGRLVGLQDQINLKKQPTRAIFAHLAAWLLTGTVGMFATAVFPGQPWAFWTGVALYGLGNGPCVGYCYD 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6007.16611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6007.16611.1 >prot_Ecto-sp13_S_contig6007.16611.1 ID=prot_Ecto-sp13_S_contig6007.16611.1|Name=mRNA_Ecto-sp13_S_contig6007.16611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp QVGATAYLESYVDDTDVIDDSHAELLIVVLWTAITIGRLAGLQDQRHLTLback to top mRNA from alignment at Ecto-sp13_S_contig6007:7775..8077- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6007.16611.1 ID=mRNA_Ecto-sp13_S_contig6007.16611.1|Name=mRNA_Ecto-sp13_S_contig6007.16611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=303bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6007:7775..8077- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6007:7775..8077- >mRNA_Ecto-sp13_S_contig6007.16611.1 ID=mRNA_Ecto-sp13_S_contig6007.16611.1|Name=mRNA_Ecto-sp13_S_contig6007.16611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=303bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6007:7775..8077- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |