prot_Ecto-sp13_S_contig6004.16604.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6004.16604.1
Unique Nameprot_Ecto-sp13_S_contig6004.16604.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length369
Homology
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: D7FI12_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI12_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 2.300e-138
Identity = 237/328 (72.26%), Postives = 239/328 (72.87%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERSPEVPSPGMGSAVALAGRAPPGASIRPGDIHHLNPYAGGXXXXXXXXYLRGMAPSQDRTGAGGAMGGGAAAHLPHRGVLSGAGGGYGGAMGMEDNGWSRARSGXXXXXXXXXXXXXXXXXXXXXXVDXXXXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRQGMPDXXXXXXXXXXXXXXXXXXXDGLLVESPGGPPLGRFLDGMDSPVVDGAHTPGSMVSLDQVFDD 328
            NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRP+LLSEVRRG+VPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERSPEVPSPGMGSAVALAGRAPPGASIRPGDIHHLNPYAGGXXXXXX  YLRGM PSQDRTGAGGA GGGAAAHLPHRGVLSGAG GYGGAMGMEDNGWSRARSGXXXXXXXXX                                                                                    DGLLVESPGGPPLGRFLDGMDSPVVDGAHTPGSMVSLDQVFDD
Sbjct:   71 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPELLSEVRRGVVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERSPEVPSPGMGSAVALAGRAPPGASIRPGDIHHLNPYAGGXXXXXXPAYLRGMTPSQDRTGAGGAAGGGAAAHLPHRGVLSGAGSGYGGAMGMEDNGWSRARSGXXXXXXXXXGAA---------------------------------------------------------------------------------DGLLVESPGGPPLGRFLDGMDSPVVDGAHTPGSMVSLDQVFDD 317          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 8.910e-136
Identity = 273/318 (85.85%), Postives = 277/318 (87.11%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERSPEVPSPGMGSAVALAGRAPPGASIRPGDIHHLNPYAGGXXXXXXXXYLRGMAPSQDRTGAGGAMGGGAAAHLPHRGVLSGAGGGYGGAMGMEDNGWSRARSGXXXXXXXXXXXXXXXXXXXXXXVDXXXXXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LHRQGMPDXXXXXXXXXXXXXXXXXXXDGLLVESPGGPPLGRFLDGMDSPVVDG 312
            NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNR+RSPEVPSPGMGSAVAL+GRAPPGASIRPGDIHHLNPYAGG XXXXX  YLRGMAPSQDRTGAGGA+GGGAAAHLPHRGVLSGAGGGYGGAMGMEDNGWSRARSGXXXXXXXXXXXXXXXXX     +D        YQ       XXXXXXXXXXXXXXXXXXXX  XXX      LHRQGMPD        XXXXXXXXXXXDGLLVESPGGPP GRFLD MDSPVVDG
Sbjct:   52 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRDRSPEVPSPGMGSAVALSGRAPPGASIRPGDIHHLNPYAGGGXXXXXPAYLRGMAPSQDRTGAGGAVGGGAAAHLPHRGVLSGAGGGYGGAMGMEDNGWSRARSGXXXXXXXXXXXXXXXXXFYRGGMDGGVPTGIPYQQQQHQLQXXXXXXXXXXXXXXXXXXXXHHXXXXXXGQYLHRQGMPDGSGGGATWXXXXXXXXXXXDGLLVESPGGPPFGRFLDVMDSPVVDG 369          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 9.330e-38
Identity = 68/90 (75.56%), Postives = 83/90 (92.22%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERS 90
            NKFSSFQRQLNLYGFRK+VKGRESGCYMHP FLRD P+ L+EV+RG+VPPCPP Y+RK+YGSGPRFM+Q++ +DSEPELV+ +RG+ E+S
Sbjct:   52 NKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDSPEKLTEVKRGVVPPCPPCYSRKIYGSGPRFMSQEEGSDSEPELVVQARGHWEKS 141          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.140e-30
Identity = 58/85 (68.24%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRG 85
            +KFSSFQRQLNLYGFRKIV+GRESG YMH  F R R DLL  V+RG +PPCPPEY +K+YGSG R   +D E DS+PEL+ P RG
Sbjct:   36 DKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSGAR--GEDSEADSDPELIPPPRG 118          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.190e-24
Identity = 55/91 (60.44%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSGPR------------FMNQDDETDSEPEL 79
            +KFSSFQRQLNLYGFRKIVKGRESGCY+H  F R  P+LL +VRRG VPPCPP Y RKVYG   R                D  +DSEPE+
Sbjct:   69 DKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYGCSTRPRQGAGSALDGTARTSDSSSDSEPEM 159          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.240e-24
Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGS 62
            +KFSSFQRQLNLYGFRKIVKG ESGCY+H  F R  P+LL +VRRG +PPCPP Y  KVYGS
Sbjct:   49 DKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYGS 110          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.730e-23
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSG 63
            +KFSSFQRQLNLYGFRKIV+G+E+G YMH  F R R DLL  VRRG +PPCPP+Y RK+YGSG
Sbjct:   47 DKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSG 109          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 5.180e-17
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSG 63
            NK+SSFQRQLNLYGFRK+V+G E+G YMHP+F R +P+ LS+VRRG  P  PPE+   V+G G
Sbjct:   97 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 159          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.060e-14
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPP------CPPEYTRKVYGSG 63
            NK+SSFQRQLNLYGFRK+V+G E+G YMHP+F R +P+ LS+VRRG  P        PPE+   V+G G
Sbjct:   74 NKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEEEAFPQIPPEFAHDVHGHG 142          
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Match: D7FGR5_ECTSI (Transcription factor prr1 (Pombe response regulator 1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR5_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.240e-13
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    1 NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSG-----PRFMNQDDETDSEPELVIPSR--GNRERSPEVPS-------------PGMGSAVALAGRAPP--GASIRPG 117
            NKFSSF+RQLNLYG+RK++KG ++G YMHP F R RPDLL EV++G VP        +++G       P   N+++   +E   ++P+    N   SP  P              PGM    ALA  AP   G  + PG
Sbjct:   23 NKFSSFRRQLNLYGYRKVIKGPDAGAYMHPSFQRGRPDLLGEVKKGKVPHYDMHGVNEIHGQHFRHHPPGVKNKEN---AERAKMVPAHMTANPHSSPVTPELHGGVGYPTPHGVPGMMGNPALAASAPAAGGGHMTPG 158          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6004.16604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI12_ECTSI2.300e-13872.26Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5L4Y2_9PHAE8.910e-13685.85HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KNL3_9PHAE9.330e-3875.56HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YPY0_9STRA5.140e-3068.24HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A835YN41_9STRA3.190e-2460.44HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A835Z0U6_9STRA7.240e-2474.19HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A835Z533_9STRA2.730e-2373.02HSF-type DNA-binding-domain-containing protein (Fr... [more]
D8LU68_ECTSI5.180e-1763.49Heat Shock transcription factor (Partial) (Fragmen... [more]
A0A6H5JLW3_9PHAE1.060e-1457.97HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7FGR5_ECTSI1.240e-1338.85Transcription factor prr1 (Pombe response regulato... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..47
e-value: 4.6E-11
score: 44.8
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 1..45
e-value: 2.3E-9
score: 37.8
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 1..342
NoneNo IPR availablePANTHERPTHR10015:SF206HEAT SHOCK FACTOR PROTEINcoord: 1..342
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6004contigEcto-sp13_S_contig6004:4667..7380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6004.16604.1mRNA_Ecto-sp13_S_contig6004.16604.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6004 4667..7380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6004.16604.1 ID=prot_Ecto-sp13_S_contig6004.16604.1|Name=mRNA_Ecto-sp13_S_contig6004.16604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=369bp
NKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPP
CPPEYTRKVYGSGPRFMNQDDETDSEPELVIPSRGNRERSPEVPSPGMGS
AVALAGRAPPGASIRPGDIHHLNPYAGGGDHHHHPPYLRGMAPSQDRTGA
GGAMGGGAAAHLPHRGVLSGAGGGYGGAMGMEDNGWSRARSGGGGGSAGA
GGAAAGGGGFYRGGVDGGVPAGVPYQQQPPHHHHHQLQQQYQLQQHQLQQ
HHHQQGQYLHRQGMPDGGGGGATWGAAGGGGGGGEDGLLVESPGGPPLGR
FLDGMDSPVVDGAHTPGSMVSLDQVFDDDPQQRQQQQQQQQQQQQYWEGR
IPGGEMWPSAGVSQTGRF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR000232HSF_DNA-bd
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf