mRNA_Ecto-sp13_S_contig6000.16594.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6000.16594.1
Unique NamemRNA_Ecto-sp13_S_contig6000.16594.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 627 bits (1618), Expect = 1.660e-211
Identity = 415/781 (53.14%), Postives = 422/781 (54.03%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR-------------------------------------------------------------RSEP*LRLPSR--------------------------------------------------------------------------------------------------SDGG----------------------------RCYAL------------------------------------------------------------------------------------HD------------------------------ETEVW--------------------------------ATAGSAAPRLHMFTNGCGKQHKGKRNFRAVAQSLRRLGVRILHNFAVTPHFKGTHDGIGALMKRLLRNAEMHGMRIPDVDVTHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPMDLTAFPGSSKL*F 1665
            M VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAML AGAAEQAAA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSL IRHETFSDAR RMHNTNHDIAPKIA SEGCYVYNERKTR                                                              S   L L SR                                                                                                  SDGG                             C A+                                                                                    H+                              ET+ W                                ATAGSAAPR+HMFT+GCGKQ+KGKRNFRAVAQSLRRLGVRILHNFAVT HFKGTHDGIGALMKRLLRNAEMHG RIPDVDV HEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPP+DLT  PGSSKL F
Sbjct:    1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSYMEHHALAKWQRQAHKMCMATLRQGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYF 781
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5L780_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L780_9PHAE)

HSP 1 Score: 566 bits (1459), Expect = 3.350e-192
Identity = 341/456 (74.78%), Postives = 357/456 (78.29%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQR-------CKPVESGGVSLAERANSLSIRHETFSDARRRMHNT-NHDIAPKIAVSEGCYVYNERKTRRSEP*LRLPSRSDGGRCYALHDETEVWATAGSAAPRLHMFTNGCGKQHKGKRNFRAVAQSLRRLGVRILHNFAVTPHFKGTHDGIGALMKRLLRNAEMHGMRIPDVDVTHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPMDLTAFPGSSKL*F 1665
            M VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAML AGAAEQAAA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALA     GE    +TD     +        C    +  + +A   +S   R E  +DA   + +  NHD     A  E    +                       Y    ++   ATAGSAAPR+HMFT+GCGKQ+KGKRNFRAVAQSLRRLGVRILHNFAVT HFKGTHDGIGALMKRLLRNAEMHG RIPDVDV HEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPP+DLT  PGSSKL F
Sbjct:    1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALA-----GE-LLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAH-----------------------YTTGPKSA--ATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYF 425
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 483 bits (1242), Expect = 1.210e-160
Identity = 270/281 (96.09%), Postives = 270/281 (96.09%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            M VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAML AGAAEQAAA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSL IRHETFSDAR RMHNTNHDIAPKIA SEGCYVYNERKTR
Sbjct:    1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTR 281
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5JZE2_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE2_9PHAE)

HSP 1 Score: 454 bits (1168), Expect = 9.380e-153
Identity = 266/307 (86.64%), Postives = 267/307 (86.97%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVR-QQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYV-------------------------YNERKTR 1164
            M VDRTIEIRGEER VR QQRKKHSRG LLISQLLRKGTTEAAGKPVQ VVADEVELLEKGRE+VEGIRERASKRGKRQPAAXXXXXXXXX KAK K ADAALSDPLALAHDGGTRSGATPETSREEA AEERRSSAMDLMQNDPVLMERVRAML AGAAEQAAA VAAIDAANTRALRASLQALKQHCNSS GWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSL IRHETFSDAR RMHNTNHDIAPKIAVSEGCY                          YNERKTR
Sbjct:    1 MQVDRTIEIRGEEREVRLQQRKKHSRGTLLISQLLRKGTTEAAGKPVQCVVADEVELLEKGREYVEGIRERASKRGKRQPAAXXXXXXXXXKKAKLKEADAALSDPLALAHDGGTRSGATPETSREEADAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSTGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAVSEGCYXXXXXXXXXXXXXXXXXXXXXXXXXXYNERKTR 307
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5JH54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH54_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 2.830e-135
Identity = 240/281 (85.41%), Postives = 247/281 (87.90%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            M VDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKP+QSV ADEVELLE GREHVEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVA+ERRSSAMDLMQNDPVL+ERVRAML  GAAEQAAA VAAIDAANTRALRASLQALKQHCNS        +A   +     H    +DVCH GQRCKPVESGGVSLAERANSL IRHETFSDARRRM+NTNHDIAPKIA SEG Y YNERKTR
Sbjct:    1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPMQSVFADEVELLETGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVADERRSSAMDLMQNDPVLIERVRAMLDTGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSCRADHFPDSARCSSRSGRAHV---SDVCHAGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMYNTNHDIAPKIAASEGYYEYNERKTR 278
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5KBP5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP5_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 2.890e-128
Identity = 223/230 (96.96%), Postives = 224/230 (97.39%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 1011
            M VDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXX  AKR+GADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAML AGAAEQAAA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG
Sbjct:    1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKREGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 230
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5KA34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA34_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 1.200e-123
Identity = 213/228 (93.42%), Postives = 215/228 (94.30%), Query Frame = 1 
Query:  481 VELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            VE + K  E VEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAML AGAAEQ AANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVA GAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSL IRHETFSDARRRMHN NHDIAPKIAVSEGCYVYN+RKTR
Sbjct:    9 VESMLKASEXVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQVAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAPGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNMNHDIAPKIAVSEGCYVYNDRKTR 236
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5KQS4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQS4_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 1.550e-123
Identity = 214/281 (76.16%), Postives = 236/281 (83.99%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            MLVDR I +RGE+RVVRQ RKKH+RGILL S LL+KGTT+AAG  + SVVADE +L EKGREH E I+ERASKRG +Q A XXXXXX    K KRKGAD ALSDPLALAHDGGTRSGATPE SREE  +EERRSSA++L+Q D VLMERVRAML A AA+QAAA  AA++AANTRALRASLQALK+H NSSIGWT Y TALA AAGAGEHTC D ++C PG RCKP E GGVS AERA SL IR+ETFSDAR RMHNTNHDIAP+ AVS+GCYVYNERKTR
Sbjct:    1 MLVDRIIHVRGEKRVVRQHRKKHNRGILLTSWLLKKGTTKAAGSKLSSVVADEDQLREKGREHAEAIQERASKRGNQQAAXXXXXXXS--GKGKRKGADVALSDPLALAHDGGTRSGATPEASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTR 279
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5L711_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L711_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 2.140e-101
Identity = 185/273 (67.77%), Postives = 188/273 (68.86%), Query Frame = 1 
Query:  346 IRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            +RGEERVVRQQRKKH RGI  ISQLL K  TEAAGKPVQSVVADEVELLEKG+EHV GIRERASKRGKRQPA           +AKRKGADAALSDPLALAHDGGTRSGATP TSREEA                                                           HCNSSIGWTTY TALAVAA AGEHTCTDTDVCHPGQRCKPVESGGVSLAER NSL IRHET SDARRRMHNTNHDIA KIA SEGCYVYNERKTR
Sbjct:    1 MRGEERVVRQQRKKHIRGIQ-ISQLLTKVITEAAGKPVQSVVADEVELLEKGKEHVGGIRERASKRGKRQPADAVAASSAAAKQAKRKGADAALSDPLALAHDGGTRSGATPATSREEA-----------------------------------------------------------HCNSSIGWTTYYTALAVAARAGEHTCTDTDVCHPGQRCKPVESGGVSLAERTNSLGIRHETSSDARRRMHNTNHDIAHKIAASEGCYVYNERKTR 213
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BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Match: A0A6H5L5G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5G2_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 1.410e-96
Identity = 201/281 (71.53%), Postives = 204/281 (72.60%), Query Frame = 1 
Query:  322 MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXNKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSDARRRMHNTNHDIAPKIAVSEGCYVYNERKTR 1164
            M VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXX  AKRKGADAALSDPLALAHDGGTR GAT +TSREEAVAEERRSSAMDLMQNDPVLMERVRAML A AAEQAAA VAAIDA NTRAL AS+QA+KQHCNS IG T Y                                                           NTNHDIAPKIA SEGCYVYNE KTR
Sbjct:    1 MQVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRRGATSDTSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAVAAEQAAAKVAAIDAVNTRALCASMQAVKQHCNSLIGCTLY-----------------------------------------------------------NTNHDIAPKIAASEGCYVYNEHKTR 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6000.16594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7E6_9PHAE1.660e-21153.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L780_9PHAE3.350e-19274.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF90_9PHAE1.210e-16096.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZE2_9PHAE9.380e-15386.64Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH54_9PHAE2.830e-13585.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBP5_9PHAE2.890e-12896.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA34_9PHAE1.200e-12393.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQS4_9PHAE1.550e-12376.16Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L711_9PHAE2.140e-10167.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5G2_9PHAE1.410e-9671.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6000contigEcto-sp13_S_contig6000:6186..8577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2069
Hectar predicted targeting categoryother localisation
Exons2
Cds size858
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463835.4716973-UTR-Ecto-sp13_S_contig6000:6185..65061681463835.4716973-UTR-Ecto-sp13_S_contig6000:6185..6506Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6000 6186..6506 +
1681463835.506961-UTR-Ecto-sp13_S_contig6000:7687..85771681463835.506961-UTR-Ecto-sp13_S_contig6000:7687..8577Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6000 7688..8577 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463835.4833047-CDS-Ecto-sp13_S_contig6000:6506..68871681463835.4833047-CDS-Ecto-sp13_S_contig6000:6506..6887Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6000 6507..6887 +
1681463835.4937582-CDS-Ecto-sp13_S_contig6000:7210..76871681463835.4937582-CDS-Ecto-sp13_S_contig6000:7210..7687Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6000 7211..7687 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6000.16594.1prot_Ecto-sp13_S_contig6000.16594.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6000 6507..7687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6000.16594.1

>prot_Ecto-sp13_S_contig6000.16594.1 ID=prot_Ecto-sp13_S_contig6000.16594.1|Name=mRNA_Ecto-sp13_S_contig6000.16594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
MLVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVV
ADEVELLEKGREHVEGIRERASKRGKRQPAAAAAASSAAANKAKRKGADA
ALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERV
RAMLHAGAAEQAAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTA
LAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLSIRHETFSD
ARRRMHNTNHDIAPKIAVSEGCYVYNERKTRRSEP*
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mRNA from alignment at Ecto-sp13_S_contig6000:6186..8577+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6000.16594.1 ID=mRNA_Ecto-sp13_S_contig6000.16594.1|Name=mRNA_Ecto-sp13_S_contig6000.16594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6000:6186..8577+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCAGGCGCTTTCCGGTAAATGCCGGAGAATGGCGTCCTAGAACGAGTGT
TCGTCGGTATGAAAAACAGAGATGGGTTCTAGAAACGTTTCGGCGAGACA
AAAAAACGAAAAAAAAAAATCTCCCTACATTTTTCAAGATAAACGATGCG
GCCCATCCTGTTTCACCCCGAACATCGCCGACTCAAGGCTCGTTCTCCAC
GGCCATCGACTCCGCGTGGTCGAATTACATACAGAGGACACCACTCTCGA
GGTCATCAGACCTACTCACGTTCTAGGACGGCCGTCCCGACTTGGGCCTG
GCCGTGGCTCGTGGCAGCCTCATGCTGGTAGACCGCACAATCGAAATCCG
AGGGGAAGAGAGGGTGGTGAGACAGCAGCGGAAGAAGCACAGCCGCGGGA
TACTGCTAATCAGCCAGCTGTTGAGAAAGGGTACCACCGAGGCAGCTGGA
AAACCCGTGCAATCTGTGGTTGCTGATGAGGTTGAGCTCCTCGAAAAGGG
TAGAGAGCATGTTGAAGGCATCCGAGAGAGAGCATCGAAACGCGGGAAAC
GACAGCCTGCTGCTGCTGCTGCCGCTTCATCTGCTGCGGCGAACAAGGCG
AAGCGCAAGGGGGCAGACGCAGCTCTCTCCGACCCTCTAGCATTGGCTCA
TGATGGCGGGACTAGAAGCGGTGCTACCCCAGAGACTTCGCGGGAGGAAG
CGGTGAGTTTTGAGTCACTTCTGAGGTGCTGCTGAAAGGTGTTAAACTCC
TTGATTGACTGCTTTACTTTGCGCGCCAGTTCGTGCCGCTTTTTTTTGTA
AGTTGAAATTTTGTATCGTACAAACGCTGCCCGTCCTCTTGGGTGCCCCC
AGGAATTGAGGTCCATCCCACCACGTCGATCTTAAGCACAGAAAGCGCAT
TAAAAATTGCGCGGGGTTGCTGACTGCTATAACTGCTGCAATGACGCTGC
TACCGTGGTGTTTATATGTCGCCCACTCATATGATCCCCCGACTCCTGCA
ATAACTACTGATACGTTATACGCAGGTTGCGGAGGAGCGTCGCTCTAGCG
CGATGGATTTGATGCAGAACGACCCCGTGTTGATGGAGCGAGTACGGGCC
ATGCTGCATGCTGGCGCGGCAGAGCAGGCAGCAGCTAACGTGGCTGCGAT
CGACGCGGCCAACACTCGTGCACTCCGTGCGTCGTTGCAAGCGCTGAAGC
AGCACTGCAACAGCTCGATAGGGTGGACCACTTACCAGACAGCGCTCGCT
GTAGCAGCCGGAGCGGGAGAGCACACGTGTACTGACACGGACGTGTGCCA
CCCCGGCCAGCGGTGCAAACCCGTTGAGTCTGGCGGAGTGAGCCTTGCCG
AGCGAGCCAACAGTCTCAGCATTCGGCACGAGACTTTCAGCGACGCACGG
CGGCGGATGCACAACACGAACCACGACATCGCCCCCAAGATCGCTGTAAG
TGAGGGATGCTACGTGTACAACGAGCGCAAGACACGGCGATCCGAACCAT
GACTTCGACTTCCATCACGCAGCGATGGAGGTCGTTGTTACGCACTACAC
GACGAGACCGAAGTCTGGGCCACCGCTGGGAGTGCGGCCCCACGATTGCA
CATGTTTACGAACGGGTGCGGCAAGCAGCACAAGGGGAAACGGAACTTTC
GAGCGGTGGCGCAGAGCCTGAGGAGGCTTGGTGTCCGCATTTTGCACAAC
TTCGCCGTCACTCCTCACTTCAAGGGCACGCATGATGGCATCGGGGCGCT
CATGAAGCGCCTACTTCGGAACGCGGAGATGCATGGCATGCGTATTCCCG
ACGTCGACGTCACGCACGAGTTTCTTCTAGGCTACGCCGTGGAGGCGGAC
AAGGCGCGTGAAGGCCACTTCACAACCTGGTCCCCTTACCGGATCAAGAG
CTTCGAGGTCAGGAAGTTTGGCCCCAAGGAAATTCCTCGCCCACCGATGG
ATCTGACGGCCTTCCCTGGAAGTTCCAAGCTGTAGTTTTCACGGGAACAC
AGGAGGAGCAGGAGGAGGTGCACGATACCTATAGTCTTATGTGGGCTACT
AGTGTGGGGGTGCATACAGACGGTTTTGTGGTGGAAGCTGCCGGAGACGA
GGTGTTGAAGGGCAGGAAGTGGGTGTTGGACGAGTCCAGGGCGAGGAAAT
GGGCCACCCCCAAGAAGTTCACCAGATCTTGGAAGTTGCGGGTTCGGGGC
GCATCGTGCTACTGCTCGACTTGCCGAGTAGGCTGCTACGATGACTGCAT
GGTAGCGAAGGTGTACCCCGACTTGGTTGGCGAGGTGATGGACAAGTCGG
GAACAGAGATGGTTGGGAGACGCACGCTTGGGACTCAATCGACCGGCGTC
ATTCTTCCGGTCATATCTTCGGACGAGTCCCCAGTGGCGCCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6000:6186..8577+

>mRNA_Ecto-sp13_S_contig6000.16594.1 ID=mRNA_Ecto-sp13_S_contig6000.16594.1|Name=mRNA_Ecto-sp13_S_contig6000.16594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6000:6186..8577+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGTAGACCGCACAATCGAAATCCGAGGGGAAGAGAGGGTGGTGAG
ACAGCAGCGGAAGAAGCACAGCCGCGGGATACTGCTAATCAGCCAGCTGT
TGAGAAAGGGTACCACCGAGGCAGCTGGAAAACCCGTGCAATCTGTGGTT
GCTGATGAGGTTGAGCTCCTCGAAAAGGGTAGAGAGCATGTTGAAGGCAT
CCGAGAGAGAGCATCGAAACGCGGGAAACGACAGCCTGCTGCTGCTGCTG
CCGCTTCATCTGCTGCGGCGAACAAGGCGAAGCGCAAGGGGGCAGACGCA
GCTCTCTCCGACCCTCTAGCATTGGCTCATGATGGCGGGACTAGAAGCGG
TGCTACCCCAGAGACTTCGCGGGAGGAAGCGGTTGCGGAGGAGCGTCGCT
CTAGCGCGATGGATTTGATGCAGAACGACCCCGTGTTGATGGAGCGAGTA
CGGGCCATGCTGCATGCTGGCGCGGCAGAGCAGGCAGCAGCTAACGTGGC
TGCGATCGACGCGGCCAACACTCGTGCACTCCGTGCGTCGTTGCAAGCGC
TGAAGCAGCACTGCAACAGCTCGATAGGGTGGACCACTTACCAGACAGCG
CTCGCTGTAGCAGCCGGAGCGGGAGAGCACACGTGTACTGACACGGACGT
GTGCCACCCCGGCCAGCGGTGCAAACCCGTTGAGTCTGGCGGAGTGAGCC
TTGCCGAGCGAGCCAACAGTCTCAGCATTCGGCACGAGACTTTCAGCGAC
GCACGGCGGCGGATGCACAACACGAACCACGACATCGCCCCCAAGATCGC
TGTAAGTGAGGGATGCTACGTGTACAACGAGCGCAAGACACGGCGATCCG
AACCATGA
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