mRNA_Ecto-sp13_S_contig60.16587.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A6H5KPD2_9PHAE (zinc_ribbon_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD2_9PHAE) HSP 1 Score: 940 bits (2429), Expect = 0.000e+0 Identity = 555/614 (90.39%), Postives = 566/614 (92.18%), Query Frame = 1
Query: 202 RSRLPGGTSTSARRVRSSGHVRSRSSSDESSSGGEPWGWSADQSGREGDDGGGASGPWDDSSQDKWEALYAEGEKEKQNSTFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKCVIADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVRVPGKPAVGSGPDEAEEEXXXXXXXXXXXXXXXDNTLDGLSIDDLDDDDDFPTLEDGTIPPDESPEGKAQRLRLEQEKARRRAEKLGILLDSDFEMAAGTAAANSGDGKTVKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-AREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYVMDMLMNDFMDASLDNIAELVGLVDQWNNKIPAPGPDGQDDAAXXXXXXXXXXGRGGSSAG--GSPASKGSSRRSIGEKFCTECGAKIPASAXXXXXXXXXQQETVPAA 2034
+SRLPGGTS +A RVRSSGHVR RSSSDES+S GEPWGWSADQSGREGDD GGA GPWDDSSQDKWEALYAEGEKEKQ+STFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEK VIADLMKEIWKEK LVKNP+LDPAPVNLTGLRKAGLARACEL GIADPTPVVESCFEVWRRARHDVERHLFPGVLDTL+ELK RGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVRVPGKPAVGSGPDEAEEE DNTLDG+ IDD+DDDDDFPTLEDGT+PPDESPEGKAQR RLEQEKARRRAEKLGILLDSDFEMAAGTAAANSGDGKTVKSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYV+DMLMNDFMDASLDNIAELVGLVDQWNNKIP PGPDGQDDAA XXXXXXXXX GSP S GSSRRS GEKFCTECGAKIPASAXXXXXXXX Q+ETVPAA
Sbjct: 3 KSRLPGGTSKAACRVRSSGHVRLRSSSDESNSEGEPWGWSADQSGREGDDRGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKYVIADLMKEIWKEK-LVKNPELDPAPVNLTGLRKAGLARACELAGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLRELKGRGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVRVPGKPAVGSGPDEAEEEKDVDGEEE-------DNTLDGMGIDDVDDDDDFPTLEDGTMPPDESPEGKAQRRRLEQEKARRRAEKLGILLDSDFEMAAGTAAANSGDGKTVKSSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYVIDMLMNDFMDASLDNIAELVGLVDQWNNKIPVPGPDGQDDAAAXXXXXXXXXXXXXXXXXXXGSPVSIGSSRRSGGEKFCTECGAKIPASAXXXXXXXXKQEETVPAA 608
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: D8LL24_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL24_ECTSI) HSP 1 Score: 566 bits (1458), Expect = 2.480e-190 Identity = 377/563 (66.96%), Postives = 383/563 (68.03%), Query Frame = 1
Query: 679 QLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQV-------------------------------------------------------------------------------------------------------------GERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVRVPGKPAVGSGPDEAEEEXXXXXXXXXXXXXXXDNTLDGLSIDDLDDDDDFPTLEDGTIPPDESPEGKAQRLRLEQEKARRRAEKLGILLDSDFEMAAGTAAANSGDGKTVKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYVMDMLMNDFMDASLDNIAELVGLVDQWNNKIPAPGPDGQDDAAXXXXXXXXXXGRGGSSAGG--SPASKGSSRRSIGEKFCTECGAKIPASAXXXXXXXXXQQETVPAA 2034
QLVKNPDLDPAPVNLTGLRKAGLARACELTG+ADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQV GERKPQPGPFRAAVK+AGYPSEFAVGGEWVHVGDDWASDCVGGK EAEEE XXXXX NTLDGL IDDLDDDDDFPTLEDGTI PDESPEGKAQRLR EQEKARRRAEKLGILLDSDF+MAAGTAAANSGDGKTVKSS XXXXXXXXXXXXXXXXXXXXXXXXX AREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYVMDMLMNDFMDASLDNIA+LVGLVDQWNNKIPAP RGG SAGG SPASKGS+RRS GEKFCTECGAKIPASAXXXXXXXX Q+ET PAA
Sbjct: 18 QLVKNPDLDPAPVNLTGLRKAGLARACELTGVADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVRHLLRLGSARLCGLKRRAWRVVVPYLAALRSGCRLREEPVPFAARVLICKPEGQTRGCVGVLVFVLFFPLRALLKWLFACLSVGFLSLGLVRDNYVLSIECSDTLNTKVGERKPQPGPFRAAVKRAGYPSEFAVGGEWVHVGDDWASDCVGGK----------------------EAEEEKDVDGEEXXXXXG---NTLDGLDIDDLDDDDDFPTLEDGTIAPDESPEGKAQRLRREQEKARRRAEKLGILLDSDFDMAAGTAAANSGDGKTVKSSTSSGAGDAXXXXXXXXXXXXXXXXXXXXXXXXXXAREELKNRKLYAREMSAIAMGHPEVAQGPGKMMSMGSSSYVMDMLMNDFMDASLDNIADLVGLVDQWNNKIPAPAR------------------RGGGSAGGRGSPASKGSTRRSGGEKFCTECGAKIPASAXXXXXXXXKQEETFPAA 537
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: D8LL23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL23_ECTSI) HSP 1 Score: 211 bits (538), Expect = 9.400e-61 Identity = 110/121 (90.91%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 202 RSRLPGGTSTSARRVRSSGHVRSRSSSDESSSGGEPWGWSADQSGREGDDGGGASGPWDDSSQDKWEALYAEGEKEKQNSTFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTM 564
+SRLPGG+ST+ARRVR SG VR RSSSDES+ GEPWGWSADQSGREGDDGGGA GPWDDSSQDKWEALYAEGEKEKQ+STFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTM
Sbjct: 3 KSRLPGGSSTTARRVRPSGLVRLRSSSDESNFEGEPWGWSADQSGREGDDGGGAGGPWDDSSQDKWEALYAEGEKEKQSSTFLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTM 123
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A4D9D955_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D955_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.370e-40 Identity = 91/214 (42.52%), Postives = 128/214 (59.81%), Query Frame = 1
Query: 517 VEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLA--EKCVIADLMKEIWKE--KQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKK-MRMRTV 1143
V+VVSFDLDDTLW TVIS AN ALQ L +P + E ++ LM + K+ ++ +++P+ + V T LRK L + + +P V E+ F+ W ARHDV+ FPG LD L+ELK RG+RL AITNGN I + +FEFC+ AE+VG RK P+ AA+++AG VG WVH+GDD++ D + K ++RT+
Sbjct: 24 VDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGE--GVGKRWVHIGDDFSEDILAAKSDFKLRTI 235
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A0G4FBI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FBI9_VITBC) HSP 1 Score: 157 bits (397), Expect = 4.450e-38 Identity = 93/218 (42.66%), Postives = 125/218 (57.34%), Query Frame = 1
Query: 511 QPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKCV-----IADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLV 1149
Q VEV++FDLDDTLW V+ A L+ +L RE+P + I DLM+ I++ KQ ++P L LT LRK L A TG +P +V+ F+VW ARHDV L G L+TL L+ G R+ AITNGNA+T+ I L + F+FC+ AE VG KP + AA++ AGY + G WVHVGDD ++D V K+ RT+ V
Sbjct: 93 QRVEVITFDLDDTLWTANPVLDSAKDRLEAYLDREYPRMGRWLSQSYGSIDDLMRAIYRRKQK-RDPRLANVVTYLTRLRKEALKEAAVKTGY-EPKLLVDQAFQVWSDARHDVLEFLPDGTLETLSSLRSTGYRIGAITNGNARTERIEVLSEYFDFCINAEDVGASKPSKKVYEAAMRVAGYMR--SPGDRWVHVGDDLSADVVPAKQQSWRTIWV 306
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: W7U0H4_9STRA (Hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0H4_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.220e-34 Identity = 97/275 (35.27%), Postives = 135/275 (49.09%), Query Frame = 1
Query: 445 FLSAMADWGKGGVLGAVDVEYTQPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLA--EKCVIADLMKEIWKE--KQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDI--------------------------------PC-----LKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKK-MRMRTV 1143
F+ A G+ E V+VVSFDLDDTLW TVIS AN ALQ L +P + E ++ LM + K+ ++ +++P+ + V T LRK L + + +P V E+ F+ W ARHDV+ FPG LD L+ELK RG+RL AITNGN I PC +FEFC+ AE+VG RK P+ AA+++AG VG WVH+GDD++ D + K ++RT+
Sbjct: 71 FMQGSAARGESPSTEGTGPEEAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGE--GVGKRWVHIGDDFSEDILAAKSDFKLRTI 343
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A835Z5K5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K5_9STRA) HSP 1 Score: 149 bits (376), Expect = 7.150e-34 Identity = 95/231 (41.13%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 517 VEVVSFDLDDT--------------LWPTMTVISQANAALQEHLSREHPDLAEKCVIADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARA-CELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGG--EWVHVGDDWASDCVGGKKMRMRTVLVRVP 1158
V+++SFDLDDT +WPT VI++AN AL L P+P++LT LR+ + R E G A +FPGVL TL LK RGVRL AITNGNA T IPCL + FEFC AEQVG RKP PGPF A +A YP AV G EWVHVGDD +DC G +++ MRTVL+R P
Sbjct: 339 VKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAA----------------------LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 543
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A2R5GUD2_9STRA (S1-like domain-containing protein C146.08c n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUD2_9STRA) HSP 1 Score: 129 bits (324), Expect = 7.080e-28 Identity = 80/218 (36.70%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 511 QPVEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKCVIADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKD---LFEFCVLAEQVGERKPQPGPFRAAVKKAG--YPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLV 1149
+P++V+SFDLDDT++ V+++A E L P+LA K V + K +++E + NLT +RK L RA E+T DP VVE F + AR+DV +H+FPGVL+ L+ LKE+G ++V++TNGN + + +FE V AE G KP+ PF+ ++ G +PSE +H+GD+ SD G + MRT+ V
Sbjct: 234 RPIKVLSFDLDDTIFECAPVLTRAAQVQHEFLEENFPELA-KAVPLEHFKTLFREALDTHAENAH----NLTFIRKQALRRAAEMTE-HDPEEVVEPAFRAFIDARNDVGKHIFPGVLEALRRLKEKGYQIVSLTNGNCDVTTVQAFMEPEAVFEHSVTAESAGAAKPEAAPFQKIMELTGVSHPSEV------LHIGDNLNSDVAGARAFGMRTLWV 439
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A7S1DFQ4_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DFQ4_HEMAN) HSP 1 Score: 117 bits (293), Expect = 2.280e-25 Identity = 81/217 (37.33%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 517 VEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKCVIADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVRVPGKP 1167
V V+FDLDDTLW + + +ANAA EH+ +P + V AD ++ + + +P+ +LT LR+ + R E G A P V +S EV+ R R+ V+ LF G ++TL++L+ +G+ + A+TNGNA P LK LF+F VLA +G KP P F A K + A G+ VHVGDD+ +D VG + +R+V G P
Sbjct: 57 VIAVTFDLDDTLWDCLPPLKRANAAHIEHMRENYPKVE---VDADKLRAEMLALRELLSPE---EGASLTILRRKTIERLAERAGYA-PEEVADSTMEVFMRERNKVD--LFEGAVETLQQLRGKGLVVGAVTNGNADVARTP-LKGLFDFSVLAGALGFPKPHPASFLEAAKLSN-----ASPGQLVHVGDDFTTDIVGARAAGVRSVWYNPKGAP 258
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Match: A0A812XN85_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812XN85_9DINO) HSP 1 Score: 117 bits (294), Expect = 6.310e-25 Identity = 77/239 (32.22%), Postives = 121/239 (50.63%), Query Frame = 1
Query: 475 GGVLGAVDVEYTQP---VEVVSFDLDDTLWPTMTVISQANAALQEHLSREHPDLAEKC--------VIADLMKEIWKEKQLVKNPDLDPAPVNLTGLRKAGLARACELTGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTD-DIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAG-YPSEFAVGGEWVHVGDDWASDCVGGKKMRMRTVLVR 1152
GG + + P +E V+FDLDDTL+PT + +A A + ++R P L E C + D + + +E +++ + + LR+ L R + ++E + AR DVE+HLF VL TLKELK+RG+R+ ++TNGNA+ P L +L +F + + G KP+ PF A+ AG +P + +HVGD A D +G K+M M+ V +R
Sbjct: 92 GGPWPIASIRESHPGTAIECVTFDLDDTLFPTKASLGKALVAFRAAVARLAPKLWEHCGQGATFGEAMQDAFRAVARENSRLRH--------DFSQLRRLALERLLARVDEVNSEEIIEQALNAFLSARGDVEQHLFEDVLPTLKELKQRGLRIGSVTNGNAELSLHAPRLSELLDFQISSANAGAPKPRAAPFLASAAAAGTWPCQV------LHVGDSLADDVLGAKRMGMKAVHLR 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60.16587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig60.16587.1 >prot_Ecto-sp13_S_contig60.16587.1 ID=prot_Ecto-sp13_S_contig60.16587.1|Name=mRNA_Ecto-sp13_S_contig60.16587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=661bp MQNLRRPLITYCVLHLAPSSAFLLGCRSVGQFAAQQCTGHRCGATSGTTRback to top mRNA from alignment at Ecto-sp13_S_contig60:12584..23259+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig60.16587.1 ID=mRNA_Ecto-sp13_S_contig60.16587.1|Name=mRNA_Ecto-sp13_S_contig60.16587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10676bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60:12584..23259+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60:12584..23259+ >mRNA_Ecto-sp13_S_contig60.16587.1 ID=mRNA_Ecto-sp13_S_contig60.16587.1|Name=mRNA_Ecto-sp13_S_contig60.16587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1983bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60:12584..23259+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |