prot_Ecto-sp13_S_contig60.16586.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60.16586.1
Unique Nameprot_Ecto-sp13_S_contig60.16586.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length506
Homology
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: D8LL22_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL22_ECTSI)

HSP 1 Score: 781 bits (2016), Expect = 6.840e-282
Identity = 416/506 (82.21%), Postives = 420/506 (83.00%), Query Frame = 0
Query:    1 MVETALSSATAAPRGFHQGTSHNNINC-TNKSKMRIEGPPSRRDKHQHGLGRAGRCPRWRHCPSSSRGATLPAGGGGAFWFASPTGGATVAAVLVATLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPSRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRXXXXXLGNQSDPAGTXXXXXGRASGTADATTERGEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFFASVACGVIAAKLSLRD 505
            MVET+LSSATAAPRGFHQ TSH NIN  TNK+KMRIE P SRRDKHQHGLGRAGRCPRWRH PS SRGATLPA GGGA WFA PT GAT AAVLV TLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLP RQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRR     LGNQSDPAGT     GRASGT DATT +                                                          DDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFF ASVACGVIAAKLSLR+
Sbjct:    1 MVETSLSSATAAPRGFHQHTSHYNINRRTNKAKMRIEEPASRRDKHQHGLGRAGRCPRWRHRPSGSRGATLPATGGGAVWFAWPTAGATAAAVLVTTLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRPPPPTLGNQSDPAGTSSSNSGRASGTVDATTGQAS-----------------------------SLGNGTGSAASEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAKLSLRE 477          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A4D9CZZ7_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZZ7_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.840e-41
Identity = 128/418 (30.62%), Postives = 179/418 (42.82%), Query Frame = 0
Query:   94 VATLLSCLCPAAIGL----VIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMDE----------------GAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPSRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRXXXXX---LGNQSDPAGTXXXXXGRASGTADATT-----------------------ERGEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 453
            VATL      A++GL    V+++P  +   HV AAFGP++L  E P+ +R LV  +P D C  L     +  D                 G IAL++R  CNFT+KV  AQ A A+ V+V D+ A ++W  +M G  E T  I IP+V VSH+TG  L +       +S  P  +G  R+R ++   GH+    + +G +E L  Y+++S++LL+FSG CGL+ AL  T YQR +R RA+R LK   ++R+          N  D               A  T+                       +R                                                             CAICL+ YEDGD L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:    5 VATLYVAGVVASLGLGRALVVDQPCCSKHLHVPAAFGPNILGLESPLHARQLVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGKIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLTYNSKDKGSNASTSPSAPLSRASPTSLPDRRKGLRGLWGLLSLRRVMDKQRSRIPLPLPAHPHLESLPASGLGKGRGGRFPCPLTGDGEAPTAGEVVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 422          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: W7TBK1_9STRA (Protease-associated RING/U-box zinc finger-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBK1_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.610e-37
Identity = 117/385 (30.39%), Postives = 163/385 (42.34%), Query Frame = 0
Query:  123 AAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMDE----------------GAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPSRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRXXXXX---LGNQSDPAGTXXXXXGRASGTADATT-----------------------ERGEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 453
            AAFGP++L  E P+ +R LV  +P D C  L     +  D                 G IAL++R  CNFT+KV  AQ A A+ V+V D+ A ++W  +M G  E T  I IP+V VSH+TG  L +       +S  P  +G  R+R ++   GH+    + +G +E L  Y+++S++LL+FSG CGL+ AL  T YQR +R RA+R LK   ++R+          N  D   +           A  T+                       +R                                                             CAICL+ YEDGD L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:   10 AAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A7S2RLQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLQ5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.600e-27
Identity = 114/396 (28.79%), Postives = 162/396 (40.91%), Query Frame = 0
Query:   98 LSCLCPAAIGLVIE-EPFQAT--FDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGC-----------VPLHN-AMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT-PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS-----------NRSW--LPSRQGRL-------RASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRXXXXXLGNQSDPAGTXXXXXGR-ASGTADATTERGEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKG 456
            LS L     GLV+E  P  A   F HV AAFG         V +  LV A+P+ GC            P+    +++G   L++RG CNFT KV+ AQ  GA+A ++ D  P  D+W + M    +    + IP++ VS+ TG+RLW             + W  L S  G         R SV A G+++++ + V  LE   IY+++S+ LL  S    L  ALG  WY +  R RA+  L  F +             DP+ T         S +A + +E+                                                          D  C+ICL+ Y  G++L  LPC H FH +CI PWL  +S  CP+CK  A   G
Sbjct:   51 LSGLTGCCEGLVLELSPGAAVEQFSHVPAAFG-----LHHDVTNLRLVPAEPKHGCECASGECLGRPAPVSPFGLEDGFALLIQRGQCNFTDKVIWAQHRGAAAAIICDDQPRDDRWEVTMSSQDQTPVPVSIPSIFVSYRTGQRLWQAAQIHGTGGGMTQRWRLLLSGVGFTAAGMRFPRVSVNATGNVMVSMQLVRPLETFIIYVVVSLALLTLSACLWLSLALGLAWYTQLQRRRALMALHRFKY-------------DPSTTVAPPATPYTSPSASSHSEK---------------------------------------------------RSPVLCRDTTCSICLDDYASGETLRALPCGHVFHDRCITPWLERRSVDCPLCKQPALPAG 377          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A1V9Y6L8_9STRA (PA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6L8_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.230e-18
Identity = 68/192 (35.42%), Postives = 102/192 (53.12%), Query Frame = 0
Query:   92 VLVATLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT---PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPSRQGRLRASVGAAGHIVMAARPVG----ALEMLGIYLLLSVLLLA 276
            ++V +LL+ LC A   LVIE P  A   H+ A FG  V +++       +  A P   C PL N +  G IALV+RG CNF+ KVL+AQ A A AV+V D       + W + M  D  N+  + IP+V VSH +G+RL +    + S    L  ++ + G I+  A P      +LE   +Y +L+++ +A
Sbjct:    5 LVVLSLLTILCSA---LVIERPCCAKLRHIHARFGRRVTNSDEYTRLE-VATAVPIQSCAPLRNDL-HGKIALVKRGGCNFSYKVLNAQRAHAKAVIVYDDYPRQRNESWAIRMVPDHTNSSSVFIPSVFVSHESGDRLLATIDIMASVNETLLVTLNSTGEILPLATPAAVYQESLETSLMYFVLAIVCIA 191          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A836CGU0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.960e-12
Identity = 62/165 (37.58%), Postives = 73/165 (44.24%), Query Frame = 0
Query:  112 EPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTP-----------------ATDKWLMVMYGDPENTQGIDIPAVLVSHATG---ERLWSNRSWLPSRQG--RLRASVGAAGHIVM 253
            +P      HV AAFG DV      V+   L+ A P D C PL NA    G +ALV RG CNFT+KVL AQ  GA AV+V DT                      W ++M G    T  I IPAV VS  T      L    + L  R    R  A+  AA H V+
Sbjct:   15 DPAYELHWHVPAAFGSDVR-----VDKERLILASPADACTPLSNAHKLAGNVALVTRGGCNFTEKVLQAQRCGAKAVIVGDTSNDADCPCAXXXXXXXXXXXXXWAVIMSGSAAETAPITIPAVFVSAPTAALLRDLLREEAHLARRAALRRAPAAAAAAAHTVL 174          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A452HTM1_9SAUR (RING-type E3 ubiquitin transferase n=1 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452HTM1_9SAUR)

HSP 1 Score: 77.4 bits (189), Expect = 9.580e-12
Identity = 108/320 (33.75%), Postives = 141/320 (44.06%), Query Frame = 0
Query:  141 LVRAKPRDGCVPLHNAMDEGA----IALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPSRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFT-----WYQRGYRTRAMRKLKSFTFRRRXXXXXLGNQSDPAGTXXXXXGRASGTADATTERGEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSE 451
            LV AKP + C P+    D       IAL+ R  CNF  KV HAQ AG  A +V +T  +D+ L + + D    + I IP+V V     + L   RS     +G          HI++    +     LG YL+       F+GV G++ A+  T       Q   R R  R  K    +        GN   P G       +A+                                        XXXXXXXXXXXXXXXXXXXXXXXXX   D+CAICL+ YE+GD L  LPC H++H +C+ PWL+     CP+CK  
Sbjct:   23 LVEAKPSNACQPIEGPPDSSNVTQFIALIRRYECNFDIKVWHAQQAGFDAAIVHNT-GSDELLKMAWNDERIREQIAIPSVFVGETASDYL---RSLFSYEKG---------AHIILIPEYM---FPLGYYLI------PFTGVVGIIIAVMCTILIVRCVQHRKRLRRNRLSKEQLKKIPVHKYKKGNWP-PGGAATSHSPQAA----------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXDEYDVCAICLDEYEEGDRLRILPCAHAYHCRCVDPWLTRTKKTCPVCKQR 279          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: F0W270_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W270_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.390e-11
Identity = 48/133 (36.09%), Postives = 63/133 (47.37%), Query Frame = 0
Query:  108 LVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-------------EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERL 227
            LV+  P   T  H+   F  D L    P ++  LV   P   C PL N                   IAL++RG CNF  KV+HAQ AGA AVV+ D+       ++M  D EN   + IPAV +S+  GE+L
Sbjct:  823 LVLNSPCCQTITHLTGEFTSDKLLESNPFDNYELVAVNPLIACQPLTNGYHTKNYTSNTSALFLRNKIALIQRGECNFVTKVIHAQEAGAKAVVMMDSQIRATDYIIMQRD-ENASKVHIPAVFISYKDGEKL 954          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A7S3R701_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R701_DUNTE)

HSP 1 Score: 70.1 bits (170), Expect = 4.660e-11
Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  405 DLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGK 455
            + CA+C++ YE G+++  LPC+H+FH QC+R WLS  S LCP+CK+   G+
Sbjct:   63 ETCAVCIQEYEPGEAIMHLPCKHAFHDQCVRSWLSTYSKLCPVCKASVTGE 113          
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Match: A0A7X5QVG8_9GAMM (Serine protease n=4 Tax=Luteibacter TaxID=242605 RepID=A0A7X5QVG8_9GAMM)

HSP 1 Score: 75.5 bits (184), Expect = 9.830e-11
Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 0
Query:  118 FDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT-PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPSR--QGRLRASVGAAGHIVMA 254
            +++  AAFGP   SA     +  + R  P DGC  L NA +  G +AL++RGTC+FT K L+AQ AGASAV++ +  PA     +   G P +   ++IP +LVS A G  L +N S L     QG   +   A G ++ A
Sbjct:  261 YEYAQAAFGPVATSAN---FAGSVARGVPNDGCAALTNAAEVAGKVALIDRGTCDFTVKALNAQAAGASAVLLANNQPAA----VTPGGTPASP--VNIPVILVSQADGNTLKANLSGLTGAVAQGTGLSGTNADGVLIYA 392          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60.16586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL22_ECTSI6.840e-28282.21RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9CZZ7_9STRA1.840e-4130.62RING-type domain-containing protein n=1 Tax=Nannoc... [more]
W7TBK1_9STRA1.610e-3730.39Protease-associated RING/U-box zinc finger-contain... [more]
A0A7S2RLQ5_9STRA2.600e-2728.79Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1V9Y6L8_9STRA1.230e-1835.42PA domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A836CGU0_9STRA1.960e-1237.58RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A452HTM1_9SAUR9.580e-1233.75RING-type E3 ubiquitin transferase n=1 Tax=Gopheru... [more]
F0W270_9STRA4.390e-1136.09T-complex protein 1 subunit alpha n=1 Tax=Albugo l... [more]
A0A7S3R701_DUNTE4.660e-1149.02Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7X5QVG8_9GAMM9.830e-1138.30Serine protease n=4 Tax=Luteibacter TaxID=242605 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 407..448
e-value: 1.3E-8
score: 44.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 406..449
e-value: 1.9E-12
score: 47.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 407..449
score: 13.079
NoneNo IPR availableGENE3D3.50.30.30coord: 104..234
e-value: 7.1E-25
score: 89.6
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 406..454
coord: 135..227
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 406..454
coord: 135..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 481..503
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 504..505
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..480
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..292
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 402..452
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 159..231
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 481..503
IPR003137PA domainPFAMPF02225PAcoord: 159..227
e-value: 1.5E-11
score: 44.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 387..454
e-value: 2.2E-18
score: 67.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60contigEcto-sp13_S_contig60:5366..12373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60.16586.1mRNA_Ecto-sp13_S_contig60.16586.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60 3523..12373 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60.16586.1 ID=prot_Ecto-sp13_S_contig60.16586.1|Name=mRNA_Ecto-sp13_S_contig60.16586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=506bp
MVETALSSATAAPRGFHQGTSHNNINCTNKSKMRIEGPPSRRDKHQHGLG
RAGRCPRWRHCPSSSRGATLPAGGGGAFWFASPTGGATVAAVLVATLLSC
LCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGC
VPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLM
VMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPSRQGRLRASVGAAGH
IVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRA
MRKLKSFTFRRRPPPPTLGNQSDPAGTSSSNSGRASGTADATTERGEFAA
AAAAAAAVPQTGGDDSSSGDGGTASASSLGSGTGSAASEDNSSGNDGFMR
REDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKS
EAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFFASVACGVIAAK
LSLRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR003137PA_domain
IPR013083Znf_RING/FYVE/PHD