prot_Ecto-sp13_S_contig59977.16575.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59977.16575.1
Unique Nameprot_Ecto-sp13_S_contig59977.16575.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
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BLAST of mRNA_Ecto-sp13_S_contig59977.16575.1 vs. uniprot
Match: D8LDM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.450e-34
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 0 
Query:    1 GVLEDVSSRGDTESRSGLAEVVSEISLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKVQ 70
            GVLEDVSSRGDTESRSGLAEVVSE+SLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTK++
Sbjct:  233 GVLEDVSSRGDTESRSGLAEVVSEVSLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKIE 302
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BLAST of mRNA_Ecto-sp13_S_contig59977.16575.1 vs. uniprot
Match: L1I7G9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7G9_GUITC)

HSP 1 Score: 52.0 bits (123), Expect = 4.530e-6
Identity = 26/70 (37.14%), Postives = 46/70 (65.71%), Query Frame = 0 
Query:    1 GVLEDVSSRGDTESRSGLAEVVSEISLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKVQ 70
            G +  ++   DTE+  GLA++VS+++LAL R+  DWV+++  LE    R+ +  E+ F Q+S+Q R K++
Sbjct:   97 GTISRIADEADTETEEGLADLVSDVALALLRKESDWVSAS--LETKVTRDEDEGESLFGQFSLQERAKIE 164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59977.16575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDM2_ECTSI5.450e-3495.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
L1I7G9_GUITC4.530e-637.14Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 2..69
e-value: 2.6E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59977contigEcto-sp13_S_contig59977:56..265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59977.16575.1mRNA_Ecto-sp13_S_contig59977.16575.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59977 56..265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59977.16575.1 ID=prot_Ecto-sp13_S_contig59977.16575.1|Name=mRNA_Ecto-sp13_S_contig59977.16575.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
GVLEDVSSRGDTESRSGLAEVVSEISLALARRSLDWVASASELEHFNNRN
VERAEATFSQYSIQLRTKVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517