prot_Ecto-sp13_S_contig5995.16574.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5995.16574.1
Unique Nameprot_Ecto-sp13_S_contig5995.16574.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: D8LDV8_ECTSI (Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV8_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 3.080e-86
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG
Sbjct:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A6T5NRP6_HETAK (Ribose-5-phosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NRP6_HETAK)

HSP 1 Score: 240 bits (612), Expect = 8.530e-78
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            MA+QDELKKQVGYK++DDYVTSGMVVGLGTGSTAAFAVERLGEL+ SGELKDIVAIPTS+RTKEQAESL IPLVTLDTHS LDVAIDGADEVDP+LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK V GLGI G
Sbjct:   38 MATQDELKKQVGYKAIDDYVTSGMVVGLGTGSTAAFAVERLGELMASGELKDIVAIPTSVRTKEQAESLGIPLVTLDTHSDLDVAIDGADEVDPELNLVKGRGGALLREKMVEVCAKKFIVIVDDSKLVDGLGIDG 173          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: K8Z9G7_NANGC (Ribose-5-phosphate isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z9G7_NANGC)

HSP 1 Score: 236 bits (603), Expect = 2.630e-76
Identity = 123/134 (91.79%), Postives = 128/134 (95.52%), Query Frame = 0
Query:    3 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            SQDELKKQVGYKSVDDYV SGMVVGLGTGSTAAFAVERLG  LK+GELKDIVAIPTSIRTKEQAESL +PLVTLD+HSVLDVAIDGADEVDP LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK VPGLG++G
Sbjct:   48 SQDELKKQVGYKSVDDYVQSGMVVGLGTGSTAAFAVERLGMKLKAGELKDIVAIPTSIRTKEQAESLGVPLVTLDSHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTG 181          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S1TKQ2_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKQ2_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 1.660e-75
Identity = 126/136 (92.65%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            MAS DELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLGE LKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH +LDVAIDGADEVD DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK V GLGISG
Sbjct:   51 MASVDELKKVVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHPILDVAIDGADEVDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKLVTGLGISG 186          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S0T664_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T664_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 2.750e-75
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            MA  +ELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLG+ LKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH VLDVAIDGADEVD DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK VPGLG+SG
Sbjct:   56 MADVEELKKDVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGQKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHPVLDVAIDGADEVDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKLVPGLGVSG 191          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S3A473_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A473_9RHOD)

HSP 1 Score: 231 bits (589), Expect = 2.730e-74
Identity = 124/135 (91.85%), Postives = 125/135 (92.59%), Query Frame = 0
Query:    2 ASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            AS DELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLGE LKSGELKDIVAIPTSIRTKEQAE LDIPLVTLDTH VLDVAIDGADE D DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK VPGLG+SG
Sbjct:   41 ASVDELKKVVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSIRTKEQAEGLDIPLVTLDTHPVLDVAIDGADEYDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKKVPGLGVSG 175          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S0ZKY8_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKY8_9RHOD)

HSP 1 Score: 229 bits (584), Expect = 3.190e-73
Identity = 122/136 (89.71%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            MAS +ELK+ VGYKS+DDYVTSGMVVGLGTGSTA FAVERLG+ L SGELKDIVAIPTSIRTKEQAESL+IPLVTLDTH VLDVAIDGADEVDPDLNLVKGRGGALLREKMVEV AKKFIVIVDDSK V GLGISG
Sbjct:   63 MASVEELKQVVGYKSIDDYVTSGMVVGLGTGSTAYFAVERLGQKLASGELKDIVAIPTSIRTKEQAESLNIPLVTLDTHPVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKMVEGLGISG 198          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S0CHS3_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHS3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.560e-71
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLG 133
            MA+QDELKK VGYKSVDDYV SGMVVGLGTGSTA FAVERLG+LL SGELKDIVAIPTSIRTKEQAESL IPLVTLDTHS LDVAIDGADEVDPDLNLVKG GGALLREKMVEVCA KFIVIVD+SK   GLG
Sbjct:   35 MATQDELKKLVGYKSVDDYVKSGMVVGLGTGSTAYFAVERLGQLLSSGELKDIVAIPTSIRTKEQAESLGIPLVTLDTHSKLDVAIDGADEVDPDLNLVKGGGGALLREKMVEVCADKFIVIVDESKLCEGLG 167          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A7S0JD86_9EUKA (Ribose-5-phosphate isomerase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JD86_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 6.650e-71
Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0
Query:    1 MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLG 133
            MASQDELKK VGYK+VDDYVTSGMVVGLGTGSTAAFAVER+G+ L SGEL DI+A+PTS+RTKEQAESL IPLVTLDTHS LDVAIDGADEVDPDLNLVKG GGALLREKMVEVCAKKFIVIVD+SK   GLG
Sbjct:   46 MASQDELKKLVGYKAVDDYVTSGMVVGLGTGSTAAFAVERVGQKLASGELSDILAVPTSVRTKEQAESLGIPLVTLDTHSDLDVAIDGADEVDPDLNLVKGGGGALLREKMVEVCAKKFIVIVDESKLCDGLG 178          
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Match: A0A2V3J0N4_9FLOR (Ribose-5-phosphate isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N4_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 1.560e-70
Identity = 118/134 (88.06%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    3 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG 136
            S DELKK  GYK+VDDYV SGMVVGLGTGSTAAFAVERLG+ L SGEL DIVAIPTSIRTKEQAESL IPLV LDTH VLDVAIDGADEVDPDLNLVKGRGGALLREKMVEV AKKFIVIVD+SK V GLGISG
Sbjct:    6 SVDELKKLTGYKAVDDYVKSGMVVGLGTGSTAAFAVERLGQKLSSGELSDIVAIPTSIRTKEQAESLGIPLVQLDTHPVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVQAKKFIVIVDESKLVDGLGISG 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5995.16574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDV8_ECTSI3.080e-86100.00Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus si... [more]
A0A6T5NRP6_HETAK8.530e-7891.18Ribose-5-phosphate isomerase n=1 Tax=Heterosigma a... [more]
K8Z9G7_NANGC2.630e-7691.79Ribose-5-phosphate isomerase n=3 Tax=Monodopsidace... [more]
A0A7S1TKQ2_9RHOD1.660e-7592.65Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S0T664_9RHOD2.750e-7591.18Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S3A473_9RHOD2.730e-7491.85Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A7S0ZKY8_9RHOD3.190e-7389.71Ribose-5-phosphate isomerase n=1 Tax=Timspurckia o... [more]
A0A7S0CHS3_9STRA1.560e-7189.47Ribose-5-phosphate isomerase n=1 Tax=Proboscia ine... [more]
A0A7S0JD86_9EUKA6.650e-7187.22Ribose-5-phosphate isomerase n=1 Tax=Calcidiscus l... [more]
A0A2V3J0N4_9FLOR1.560e-7088.06Ribose-5-phosphate isomerase n=1 Tax=Gracilariopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1360coord: 1..132
e-value: 1.2E-55
score: 189.1
NoneNo IPR availablePANTHERPTHR43748:SF3RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATEDcoord: 3..136
NoneNo IPR availablePANTHERPTHR43748FAMILY NOT NAMEDcoord: 3..136
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 55..133
e-value: 6.3E-32
score: 110.6
IPR004788Ribose 5-phosphate isomerase, type ATIGRFAMTIGR00021TIGR00021coord: 8..133
e-value: 1.6E-47
score: 159.7
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 4..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5995contigEcto-sp13_S_contig5995:6012..8618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5995.16574.1mRNA_Ecto-sp13_S_contig5995.16574.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5995 6012..8618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5995.16574.1 ID=prot_Ecto-sp13_S_contig5995.16574.1|Name=mRNA_Ecto-sp13_S_contig5995.16574.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
MASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGEL
KDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVK
GRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004788Ribose5P_isomerase_typA
IPR037171NagB/RpiA_transferase-like