prot_Ecto-sp13_S_contig59936.16572.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59936.16572.1
Unique Nameprot_Ecto-sp13_S_contig59936.16572.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A6H5JX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX88_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.610e-46
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR 82
            MSQVDFSDIIAGRPKEVGL+VLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR
Sbjct:   35 MSQVDFSDIIAGRPKEVGLEVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR 116          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: D8LRW6_ECTSI (Ran-GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW6_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 8.210e-44
Identity = 78/82 (95.12%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR 82
            +++VDFSDIIAGRPKEVGL+VLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR
Sbjct:  214 VTEVDFSDIIAGRPKEVGLEVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAVR 295          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A835ZA71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA71_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.270e-24
Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKE-LRALLMCNDGLSAAAMEAVR 82
            +++ D SD+IAGRP+++ L+VLAA+CGG+  R  L+ +DVS+NAMG  GV+ACR A+EG++E L AL MCNDGLSA+AMEAVR
Sbjct:   73 VTEADISDVIAGRPEDMALRVLAAICGGLAGRS-LSLIDVSDNAMGEKGVNACRAALEGQRETLSALRMCNDGLSASAMEAVR 154          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A2D4CFZ3_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFZ3_PYTIN)

HSP 1 Score: 77.4 bits (189), Expect = 1.300e-14
Identity = 35/81 (43.21%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAV 81
            ++ VDF+D+IAGRP++  L+VLA +C  ++  + L  +D+S+NA+G  GV AC   + G++ELR +  CN+G+SAAA + +
Sbjct:   78 LTSVDFADMIAGRPEDEALQVLATLCDALQSIKTLLRIDLSDNALGEKGVRACFGLLLGQEELRHVYFCNNGISAAAAKVI 158          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: W2PQ73_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PQ73_PHYPN)

HSP 1 Score: 75.1 bits (183), Expect = 3.110e-14
Identity = 33/77 (42.86%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAA 77
            ++ VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   ++ +++L+ +  CN+G+SAAA
Sbjct:   73 LTSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAA 149          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A5D6Y1C6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1C6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.310e-14
Identity = 35/81 (43.21%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAAMEAV 81
            ++ VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   + G+++LR +  CN+G+SAAA   +
Sbjct:   70 LTSVDFADMIAGRPEDEALQVLATLCDALAGVKTLTRIDLSDNALGEKGVRACFGLLLGQEQLRHVYFCNNGISAAAAAVI 150          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A3M6VE59_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE59_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.450e-14
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    4 VDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAA 77
            VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   ++ +++LR +  CN+G+SAAA
Sbjct:   75 VDFADMIAGRPEDEALQVLATLCDALSAIKTLTRIDLSDNALGEKGVRACFGLLQNQEQLRHIYFCNNGISAAA 148          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: W2J3U5_PHYPR (Uncharacterized protein (Fragment) n=13 Tax=Phytophthora TaxID=4783 RepID=W2J3U5_PHYPR)

HSP 1 Score: 75.1 bits (183), Expect = 8.420e-14
Identity = 33/77 (42.86%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAA 77
            ++ VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   ++ +++L+ +  CN+G+SAAA
Sbjct:   90 LTSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAA 166          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A6A3J101_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J101_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.440e-14
Identity = 33/77 (42.86%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAA 77
            ++ VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   ++ +++L+ +  CN+G+SAAA
Sbjct:  527 LTSVDFADMIAGRPEDEALQVLATLCDALSSIKTLTRIDLSDNALGEKGVRACFGLLQNQEQLQHMYFCNNGISAAA 603          
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Match: A0A0W8DJV1_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJV1_PHYNI)

HSP 1 Score: 75.1 bits (183), Expect = 8.530e-14
Identity = 33/77 (42.86%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGVDACRPAIEGKKELRALLMCNDGLSAAA 77
            ++ VDF+D+IAGRP++  L+VLA +C  +   + LT +D+S+NA+G  GV AC   ++ +++L+ +  CN+G+SAAA
Sbjct:  392 LTSVDFADMIAGRPEDEALQVLATLCDALSAIKSLTRIDLSDNALGEKGVRACFGLLQNQEKLQHMYFCNNGISAAA 468          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59936.16572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JX88_9PHAE1.610e-4698.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRW6_ECTSI8.210e-4495.12Ran-GTPase activating protein n=1 Tax=Ectocarpus s... [more]
A0A835ZA71_9STRA6.270e-2461.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CFZ3_PYTIN1.300e-1443.21Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
W2PQ73_PHYPN3.110e-1442.86Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A5D6Y1C6_9STRA3.310e-1443.21Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VE59_9STRA7.450e-1445.95Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W2J3U5_PHYPR8.420e-1442.86Uncharacterized protein (Fragment) n=13 Tax=Phytop... [more]
A0A6A3J101_9STRA8.440e-1442.86Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A0W8DJV1_PHYNI8.530e-1442.86Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..84
e-value: 8.7E-9
score: 36.5
NoneNo IPR availablePANTHERPTHR46761:SF2RAN GTPASE-ACTIVATING PROTEIN 1coord: 2..82
NoneNo IPR availablePANTHERPTHR46761FAMILY NOT NAMEDcoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59936contigEcto-sp13_S_contig59936:491..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59936.16572.1mRNA_Ecto-sp13_S_contig59936.16572.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59936 482..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59936.16572.1 ID=prot_Ecto-sp13_S_contig59936.16572.1|Name=mRNA_Ecto-sp13_S_contig59936.16572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MSQVDFSDIIAGRPKEVGLKVLAAVCGGVREREGLTFVDVSENAMGPDGV
DACRPAIEGKKELRALLMCNDGLSAAAMEAVRVRHREREG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf