prot_Ecto-sp13_S_contig5990.16569.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5990.16569.1
Unique Nameprot_Ecto-sp13_S_contig5990.16569.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5990.16569.1 vs. uniprot
Match: A0A6H5L7M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M6_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 8.150e-31
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0 
Query:   52 FTASGPIIRMKCGIRLPACNSTCNPSTDLPISCNNKVTPHLHDENDMVPTLFTIIQPHMAVDCGPHTEDGKKIPSAISIGTK 133
            F+ASGP++ M+C +  P CNST NP  +LPI+C NK+TPHLH + DM+P LF  IQPHMAVDCG HT+DG +IPSA+SIGTK
Sbjct:    4 FSASGPVVCMRCCLGTPECNSTSNPCAELPIACTNKITPHLHRDYDMIPKLFAAIQPHMAVDCGLHTKDGIQIPSAMSIGTK 85
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5990.16569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7M6_9PHAE8.150e-3164.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5990contigEcto-sp13_S_contig5990:4366..5830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5990.16569.1mRNA_Ecto-sp13_S_contig5990.16569.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5990 4356..5902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5990.16569.1 ID=prot_Ecto-sp13_S_contig5990.16569.1|Name=mRNA_Ecto-sp13_S_contig5990.16569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MFDSQVHEHGPVKVTPRRHEQHQYRPGNPTDDNLWKHCQPFQGHVLRCHL
CFTASGPIIRMKCGIRLPACNSTCNPSTDLPISCNNKVTPHLHDENDMVP
TLFTIIQPHMAVDCGPHTEDGKKIPSAISIGTKALEEVLMCEDA*
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