mRNA_Ecto-sp13_S_contig599.16568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: D7G1Y6_ECTSI (Polyketide Synthase III n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y6_ECTSI) HSP 1 Score: 360 bits (924), Expect = 4.100e-119 Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAMPPVVAQPYGQR 547
CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSL+LSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAMP VVAQP GQR
Sbjct: 148 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLNLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAMPSVVAQPNGQR 329
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A6H5L6U2_9PHAE (PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U2_9PHAE) HSP 1 Score: 360 bits (925), Expect = 2.950e-117 Identity = 178/182 (97.80%), Postives = 180/182 (98.90%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAMPPVVAQPYGQR 547
CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRL ENG GDGRGL+HVVALSFSPGVTVEGLLLKAMPPVVAQP+GQR
Sbjct: 289 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLLENGDGDGRGLRHVVALSFSPGVTVEGLLLKAMPPVVAQPHGQR 470
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A7S2C201_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C201_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.510e-48 Identity = 83/171 (48.54%), Postives = 114/171 (66.67%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV+ GRTA+ A GS A++D+ +WL++GTEDGI ++ + G+SC LSK LP Y+ N+A +V+ L H + K DVDFWA+HPGG RI+EE + L L+ E+ + WEVL YGNM+S +V+FVLE + +H EN G +A SFSPGV EG+LLK +
Sbjct: 38 CAAAVLGGRTAKTAPTGSFAIVDDHAWLMEGTEDGITLSINETGISCKLSKYLPQYIAKNMAGYVDSFLAKHDMKKEDVDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLDQYGNMLSPSVMFVLELVMKEHN---ENLAAGKEGFSQGLAFSFSPGVGAEGILLKVL 205
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA) HSP 1 Score: 179 bits (455), Expect = 8.630e-48 Identity = 85/171 (49.71%), Postives = 116/171 (67.84%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV+ GRTA+ A G A++D+ +WL++GTEDGI ++ D G+SC LSK LP Y+ N+ +V+ LG H + D+DFWA+HPGG RI+EE + L L+ E+ + WEVLRDYGNM+S +V+FVLE L +HKR G G + +A SFSPGV EG+LLK +
Sbjct: 278 CAAAVLGGRTAKTAPKGGFAIVDDHAWLMEGTEDGITLSINDTGISCKLSKYLPQYIAKNMKGYVDSFLGKHDMTMEDIDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLRDYGNMLSPSVMFVLELILNEHKRQLTAGE---EGFKQGLAFSFSPGVGAEGILLKVL 445
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN) HSP 1 Score: 171 bits (433), Expect = 3.790e-46 Identity = 82/172 (47.67%), Postives = 112/172 (65.12%), Query Frame = 2
Query: 2 CAVAVVAG-RTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV++G + A G ++D WL++GTEDGI ++ +NG+SC LSK LP Y+ N+A +V+ LG HG+ K D+DFWA+HPGG RI+EE + L LS E+ + W VL YGNM+S +V+FVLE L HK+ G RGL+ +A SFSPGV EG+L+ M
Sbjct: 129 CAAAVISGEKPGSAAAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMAGYVDSFLGMHGLQKTDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKALAKGE---RGLKQGIAFSFSPGVGAEGILINVM 297
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK) HSP 1 Score: 173 bits (439), Expect = 8.400e-46 Identity = 79/168 (47.02%), Postives = 115/168 (68.45%), Query Frame = 2
Query: 5 AVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLK 508
A AV++G T A PG+LA++D+ +WL++GTEDGI ++ +NG+SCTLSK LP Y+ N+A +V+ L HG+ + ++DFW++HPGG RI+EE + L LS E+ W VL +YGNM+S +V+FVL R +H+ + G G + +A SFSPGV EG+LLK
Sbjct: 245 AAAVISGETKETAAPGALAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDSFLNKHGIKRSEIDFWSVHPGGRRIIEEAQNGLSLSEEQCADSWAVLGEYGNMLSPSVMFVLSRVFKRHQAMIRRGE---TGYKQGLAFSFSPGVGAEGILLK 409
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.900e-45 Identity = 79/171 (46.20%), Postives = 117/171 (68.42%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV++G T + G+LA++D+ +WL++GTEDGI ++ +NG+SCTLSK LP Y+ N+A +V+ LG HG+ + ++DFW++HPGG RI+EE + L L+ E+T W VL +GNM+S +V+FVLER +H G +G + +A SFSPGV EG+LLK +
Sbjct: 286 CAAAVLSGETKDSIPKGTLAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDGFLGKHGIKRSEIDFWSVHPGGRRIIEEAQNGLGLTEEQTSDSWAVLDQFGNMLSPSVMFVLERVFKRHNAALAQGK---KGYRQGLAFSFSPGVGAEGILLKQL 453
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.700e-45 Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEP-GSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV++G +A+ G ++D WL++GTEDGI ++ +NG+SC LSK LP Y+ N+ +VE LG H + K D+DFWA+HPGG RI+EE + L LS E+ + W VL +YGNM+S +V+FVLE L HK+ G RGL+ +A SFSPGV EG+L+K M
Sbjct: 250 CAAAVISGEKPGSAKAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLGMHNLQKSDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWNVLSNYGNMLSPSVMFVLELILNDHKKALAKGE---RGLKQGIAFSFSPGVGAEGVLIKVM 418
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A6T7DYK4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DYK4_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.170e-43 Identity = 83/172 (48.26%), Postives = 115/172 (66.86%), Query Frame = 2
Query: 2 CAVAVVAGRTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHK-RLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV+ GRTA A G+ A++D+ +WL++GTEDGI ++ + G+SC LSK LP Y+ N+ +V+ L H + DVDFWA+HPGG RI+EE + L L+ E+ + WEVL YGNM+S +V+FVLE L +HK L++ G +GL A SFSPGV EG+LLK +
Sbjct: 227 CAAAVLGGRTATEAPKGAFAIIDDHAWLMEGTEDGITLSINEKGISCKLSKYLPQYIAKNMKGYVDGFLEKHDLPFEDVDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLDTYGNMLSPSVMFVLELILNEHKDELKKGNDGFSQGL----AFSFSPGVGAEGILLKVL 394
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.290e-41 Identity = 79/172 (45.93%), Postives = 109/172 (63.37%), Query Frame = 2
Query: 2 CAVAVVAG-RTARNAEPGSLAVLDNRSWLVDGTEDGIKMTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGGHRIVEETRKSLHLSLEETEGCWEVLRDYGNMVSATVLFVLERALGQHKRLRENGGGDGRGLQHVVALSFSPGVTVEGLLLKAM 514
CA AV++G + G ++D + L++GTEDGI ++ +NG+SC LSK LP Y+ N+ +VE L H + K D+DFWA+HPGG RI+EE + L LS E+ + W VL YGNM+S +V+FVLE L HK+ G RGL+ +A SFSPGV EG+L+K M
Sbjct: 245 CAAAVISGEKPGAPRAKGKFGIIDTHACLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLAKHALQKSDLDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKELAKGN---RGLKQGIAFSFSPGVGAEGVLIKVM 413 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig599.16568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig599.16568.1 >prot_Ecto-sp13_S_contig599.16568.1 ID=prot_Ecto-sp13_S_contig599.16568.1|Name=mRNA_Ecto-sp13_S_contig599.16568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp MTFGDNGVSCTLSKRLPDYVKTNVADFVEEMLGAHGVDKGDVDFWALHPGback to top mRNA from alignment at Ecto-sp13_S_contig599:19146..23549- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig599.16568.1 ID=mRNA_Ecto-sp13_S_contig599.16568.1|Name=mRNA_Ecto-sp13_S_contig599.16568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4404bp|location=Sequence derived from alignment at Ecto-sp13_S_contig599:19146..23549- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig599:19146..23549- >mRNA_Ecto-sp13_S_contig599.16568.1 ID=mRNA_Ecto-sp13_S_contig599.16568.1|Name=mRNA_Ecto-sp13_S_contig599.16568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=438bp|location=Sequence derived from alignment at Ecto-sp13_S_contig599:19146..23549- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |