prot_Ecto-sp13_S_contig59778.16550.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59778.16550.1
Unique Nameprot_Ecto-sp13_S_contig59778.16550.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: A0A6H5KNE5_9PHAE (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.780e-18
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYA IER
Sbjct:  129 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIER 166          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: D7FXI8_ECTSI (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 4.620e-17
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYA IER
Sbjct:  144 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIER 181          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: K8YQG9_NANGC (Protein farnesyltransferase subunit beta (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQG9_NANGC)

HSP 1 Score: 62.8 bits (151), Expect = 4.860e-11
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    2 GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            GGFGGGP Q+ HCAP YA+VL+LLILGT EAY +I+R
Sbjct:  119 GGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDR 155          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.490e-10
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            GGFGGGPQQL HCAP YA+VL+LL+LGT  AY++++R
Sbjct:  128 GGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDR 164          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: W7TZN2_9STRA (Protein farnesyltransferase subunit beta n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZN2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.040e-10
Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    2 GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            GGFGGGP Q+ HCAP YA+VL+LLILGT EAY +I+R
Sbjct:  135 GGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDR 171          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: UPI001C9CAA5F (protein farnesyltransferase subunit beta n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CAA5F)

HSP 1 Score: 58.5 bits (140), Expect = 6.340e-9
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    2 GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            GG+GGGP Q PH AP YA+V +L I+GTPEAY SI+R
Sbjct:  123 GGYGGGPGQYPHLAPTYAAVSALCIIGTPEAYRSIDR 159          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: A0A7R8XAP2_9CRUS (Protein farnesyltransferase subunit beta n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XAP2_9CRUS)

HSP 1 Score: 58.2 bits (139), Expect = 8.630e-9
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            +GGFGGGPQQLPH A  YA+VL+L +LGT EAY  I+R
Sbjct:  927 DGGFGGGPQQLPHLAATYAAVLALSVLGTEEAYNVIDR 964          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: A0A6A7G7K6_9CRUS (Protein farnesyltransferase subunit beta (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7K6_9CRUS)

HSP 1 Score: 58.2 bits (139), Expect = 8.690e-9
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            +GGFGGGPQQLPH AP YA+V +L+ +GT EAY  I R
Sbjct:  121 SGGFGGGPQQLPHLAPSYAAVAALITIGTQEAYEVINR 158          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: F0Y5G6_AURAN (Protein farnesyltransferase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5G6_AURAN)

HSP 1 Score: 57.8 bits (138), Expect = 1.170e-8
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    2 GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            GG+GGGPQQL HCAP YA+ L++ +LGT  AY S++R
Sbjct:   74 GGYGGGPQQLAHCAPTYAASLAIAVLGTRRAYESVDR 110          
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Match: A0A059LJK1_9CHLO (Protein farnesyltransferase subunit beta (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LJK1_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 2.240e-8
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER 38
            +GGFGGGP QLPH AP YA+V +L+ LG PEA  +++R
Sbjct:  107 SGGFGGGPHQLPHLAPTYAAVATLVSLGCPEALEAVDR 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59778.16550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNE5_9PHAE5.780e-1897.37Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
D7FXI8_ECTSI4.620e-1797.37Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
K8YQG9_NANGC4.860e-1172.97Protein farnesyltransferase subunit beta (Fragment... [more]
A0A836CMB6_9STRA1.490e-1070.27Protein farnesyltransferase subunit beta n=1 Tax=T... [more]
W7TZN2_9STRA2.040e-1072.97Protein farnesyltransferase subunit beta n=2 Tax=N... [more]
UPI001C9CAA5F6.340e-967.57protein farnesyltransferase subunit beta n=1 Tax=V... [more]
A0A7R8XAP2_9CRUS8.630e-968.42Protein farnesyltransferase subunit beta n=1 Tax=D... [more]
A0A6A7G7K6_9CRUS8.690e-965.79Protein farnesyltransferase subunit beta (Fragment... [more]
F0Y5G6_AURAN1.170e-862.16Protein farnesyltransferase subunit beta n=1 Tax=A... [more]
A0A059LJK1_9CHLO2.240e-860.53Protein farnesyltransferase subunit beta (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..38
e-value: 3.9E-9
score: 37.7
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59778contigEcto-sp13_S_contig59778:101..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59778.16550.1mRNA_Ecto-sp13_S_contig59778.16550.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59778 101..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59778.16550.1 ID=prot_Ecto-sp13_S_contig59778.16550.1|Name=mRNA_Ecto-sp13_S_contig59778.16550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYASIER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase