prot_Ecto-sp13_S_contig59742.16546.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: UPI00128F1D07 (helix-turn-helix domain-containing protein n=1 Tax=Brevundimonas sp. Bb-A TaxID=2560058 RepID=UPI00128F1D07) HSP 1 Score: 57.4 bits (137), Expect = 1.640e-9 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0
Query: 7 FGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGV 60
FG+ +RALR E LSQEEL +RAG RT++S +E GT PT+ +L RLA ALGV
Sbjct: 7 FGKNVRALRDEAGLSQEELAFRAGMKRTYLSDLERGTRNPTVRALGRLAAALGV 60
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: UPI0009DD6870 (helix-turn-helix domain-containing protein n=1 Tax=Brevundimonas abyssalis TaxID=1125965 RepID=UPI0009DD6870) HSP 1 Score: 56.6 bits (135), Expect = 3.310e-9 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 7 FGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGVP 61
FGR +RALR++ LSQEEL +RAG R+++S +E GT PT+ +L RLA AL VP
Sbjct: 7 FGRNVRALREKAGLSQEELAFRAGMKRSYVSDLERGTRNPTVRALGRLAAALDVP 61
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A3C0W231_9CAUL (Transcriptional regulator n=2 Tax=Brevundimonas TaxID=41275 RepID=A0A3C0W231_9CAUL) HSP 1 Score: 53.9 bits (128), Expect = 3.840e-8 Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 7 FGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGVP 61
FG+ +RALR E LSQEEL +RAG R ++S +E GT PT+ L RLA AL VP
Sbjct: 7 FGKNVRALRDEADLSQEELAFRAGMKRGYLSDLERGTRNPTVRCLGRLAKALNVP 61
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A2T5CAG4_9DELT (XRE family transcriptional regulator n=1 Tax=Desulfonatronum sp. SC1 TaxID=2109626 RepID=A0A2T5CAG4_9DELT) HSP 1 Score: 53.9 bits (128), Expect = 6.150e-8 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 0
Query: 3 LAHAFGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGVP 61
LA AFG LR++RKER LSQEELG +G RT++S +E G P++ ++++LA AL P
Sbjct: 12 LARAFGDVLRSVRKERGLSQEELGDESGYHRTYVSLLERGLKSPSLQTIFQLAHALNTP 70
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A1F4KGH4_9BURK (HTH cro/C1-type domain-containing protein n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 TaxID=1797566 RepID=A0A1F4KGH4_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 1.020e-7 Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 6 AFGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGV 60
AFG R++ LR +RSL+QEEL R G RT++S IE G A PT+ LY LA AL V
Sbjct: 11 AFGLRIKELRAQRSLTQEELAERTGMFRTYMSRIEAGLANPTLTMLYTLAGALEV 65
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A410MFK9_9BACI (XRE family transcriptional regulator n=1 Tax=Halobacillus litoralis TaxID=45668 RepID=A0A410MFK9_9BACI) HSP 1 Score: 52.8 bits (125), Expect = 1.710e-7 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 6 AFGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGV 60
+FG+ L+++R E SLSQEEL +RAG T+IS IE G PT+ S+Y++A+AL V
Sbjct: 12 SFGKHLKSVRHEFSLSQEELAFRAGMDPTYISGIERGKKNPTVTSIYQIAIALKV 66
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A0F9DAA4_9ZZZZ (HTH cro/C1-type domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9DAA4_9ZZZZ) HSP 1 Score: 52.8 bits (125), Expect = 1.790e-7 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 7 FGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGVP 61
G R+RALR+ RS+SQEELG+RA RT+I +E G P++ L+R+A AL +P
Sbjct: 26 LGSRIRALREGRSISQEELGFRANVHRTYIGAVERGETLPSLEVLFRIAEALKIP 80
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A4R5DJN7_9ACTN (XRE family transcriptional regulator n=1 Tax=Jiangella asiatica TaxID=2530372 RepID=A0A4R5DJN7_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 1.840e-7 Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 6 AFGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGVP 61
AFGRR+R LRKE LSQEEL RA RT++ IE G + +++RLA ALGVP
Sbjct: 14 AFGRRVRELRKELGLSQEELADRADLHRTYVGSIERGERNVALINIHRLAKALGVP 69
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: UPI001ADDA8B3 (helix-turn-helix domain-containing protein n=2 Tax=Mannheimia TaxID=75984 RepID=UPI001ADDA8B3) HSP 1 Score: 52.4 bits (124), Expect = 1.970e-7 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 0
Query: 3 LAHAFGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALG 59
+A AFGR +R LRK+++LSQEELG+ A R ++S +E G P+I ++++LA LG
Sbjct: 4 IAIAFGRAIRQLRKQKNLSQEELGFEADLQRIYVSKLELGQQQPSITTIFKLAKGLG 60
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Match: A0A326L239_9CAUL (Transcriptional regulator n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A326L239_9CAUL) HSP 1 Score: 52.0 bits (123), Expect = 2.260e-7 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 7 FGRRLRALRKERSLSQEELGWRAGTCRTWISHIECGTACPTIASLYRLALALGV 60
GRR++ LRKE LSQEEL +RA R+++S +E G PT+ +L RLA+ALGV
Sbjct: 7 LGRRVKTLRKEAKLSQEELAFRAEMKRSYVSDLERGKRNPTVRALGRLAVALGV 60 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59742.16546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig59742.16546.1 ID=prot_Ecto-sp13_S_contig59742.16546.1|Name=mRNA_Ecto-sp13_S_contig59742.16546.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bpback to top |