prot_Ecto-sp13_S_contig597.16543.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig597.16543.1
Unique Nameprot_Ecto-sp13_S_contig597.16543.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
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BLAST of mRNA_Ecto-sp13_S_contig597.16543.1 vs. uniprot
Match: D7FLC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC8_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 2.520e-129
Identity = 201/232 (86.64%), Postives = 210/232 (90.52%), Query Frame = 0 
Query:    1 MDVAAKAKKSQALIDSIEELIALEADVSLATECCQQQREPEVMVPLTEVAFMHGTVAGESVMMGLGQDYFVERSPEQARAVLRRRMADLSEQARVLREGTLLAPEEPAKSVQGQMRRKKGDSDTKKTWAKGFLSSKGSGGPAKGRLPPKRQTVPPKEPKEATDGGSRRTPTEIKFDDSEGQEVMCEVPPEQICSPPQGPT--RLYSYCLSSPGSVTCREPAENIYPPFGSNR 230
            MDVAAKAKKSQALIDSIEELIALEADVSLAT+CCQQQREPEVMVPLT+VAFMHG+VAGES+MMGLGQDYFVER+PEQAR VL+RRMADLSEQARVLREGTLLAP+EPAKSVQGQ RRKKGDSDTKKTWAKGFLSSKGSGGP KG LPPKRQTVPP+EPKEA DGGS RTPTEIKFDDSEGQEV    P E   S   GPT  RL SYCLSSPGSVTCREPA N +PPFGSNR
Sbjct:    1 MDVAAKAKKSQALIDSIEELIALEADVSLATQCCQQQREPEVMVPLTDVAFMHGSVAGESIMMGLGQDYFVERTPEQAREVLQRRMADLSEQARVLREGTLLAPKEPAKSVQGQRRRKKGDSDTKKTWAKGFLSSKGSGGPTKGHLPPKRQTVPPEEPKEAADGGSLRTPTEIKFDDSEGQEVRISSPSEDFQST-TGPTINRLCSYCLSSPGSVTCREPAGNAFPPFGSNR 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig597.16543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLC8_ECTSI2.520e-12986.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 6..98
e-value: 3.1E-13
score: 49.7
IPR009053PrefoldinGENE3D1.10.287.370coord: 4..125
e-value: 4.7E-14
score: 54.2
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 15..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig597contigEcto-sp13_S_contig597:20459..23017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig597.16543.1mRNA_Ecto-sp13_S_contig597.16543.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig597 20459..23017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig597.16543.1 ID=prot_Ecto-sp13_S_contig597.16543.1|Name=mRNA_Ecto-sp13_S_contig597.16543.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MDVAAKAKKSQALIDSIEELIALEADVSLATECCQQQREPEVMVPLTEVA
FMHGTVAGESVMMGLGQDYFVERSPEQARAVLRRRMADLSEQARVLREGT
LLAPEEPAKSVQGQMRRKKGDSDTKKTWAKGFLSSKGSGGPAKGRLPPKR
QTVPPKEPKEATDGGSRRTPTEIKFDDSEGQEVMCEVPPEQICSPPQGPT
RLYSYCLSSPGSVTCREPAENIYPPFGSNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR009053Prefoldin