mRNA_Ecto-sp13_S_contig597.16541.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig597.16541.1
Unique NamemRNA_Ecto-sp13_S_contig597.16541.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE)

HSP 1 Score: 689 bits (1778), Expect = 5.650e-241
Identity = 375/380 (98.68%), Postives = 378/380 (99.47%), Query Frame = 1
Query:    1 MAIDKTFVGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVKQWKVPPSTTCHAWRTLHIDLVHCLSLVDGTGEETCGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR 1140
            MAIDKTFVGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCV+QWKVPP+TTCHAWRTLHIDLVHCLSLVDGT EETCGGGDY NVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSG+GVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR
Sbjct:    1 MAIDKTFVGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVEQWKVPPNTTCHAWRTLHIDLVHCLSLVDGTAEETCGGGDYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLGR 380          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: F0Y6I8_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I8_AURAN)

HSP 1 Score: 120 bits (302), Expect = 3.360e-25
Identity = 132/363 (36.36%), Postives = 184/363 (50.69%), Query Frame = 1
Query:   73 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVKQ-WKVPPST----TCHAWRTLHIDLVHCLSLVDGTGEETCGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTS---EKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLG 1137
            L+PD ++ +L FL  PE       P+ + +         +W   C +  W V   T    +    R LH  ++   S   G            +V  + +++ A+  +A + R C + L   L+ E AR+A   ++ R+    + AL  +    +L +  L  +V   RP G  EG V  R  AS G L AF     G+ AVLA M  H S  +VQA+ CWSLVNLAL   QK  L +  G+  XXXXXXXXXXXXXXXXXXXXXXXXLV P+  +   + +      K VV  V+ A+ AF +   +V   CLVLHN++LD G++  L+A G    L  A  +H  DA + + A  TLRRLG
Sbjct:   93 LTPDMVIVVLGFLDAPERHAAASPPICRQHRDRVRENREVWIQLCAEAPWHVARPTLEGRSVPELRRLHRSVLDASSRARGA-----------SVDDVSRIMRAHEDVAGVQRRCLETLAERLHCERARKAA--LEARVTAQVVAALWAFLPAAELQVVALHCVVFLARPIGGAEGMVFHRGMASQG-LDAFLGKRGGIAAVLASMRAHGSVDSVQAMGCWSLVNLALNHQQKLELLKLRGLDRXXXXXXXXXXXXXXXXXXXXXXXXLVIPEAGALYEDDLDLKAANKRVVRYVLGAMAAFPDSEKLVRCGCLVLHNLSLDDGNVPHLLAAGVSLPLQRA-ARHHKDADVQRSAVSTLRRLG 440          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A7S3JW95_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW95_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.960e-20
Identity = 98/378 (25.93%), Postives = 159/378 (42.06%), Query Frame = 1
Query:   73 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCV-KQWKVPPS-------TTCHAWRTLHIDLVHCLSLVDGTGEETCGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKA---------------VVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLG 1137
            L+P+ ++ +L +LP  E               +     NIW   C  K W++  S       +T   +R LH +L+H + +           GD   V  +  ++  ++ +  +   C +RL   L+ E  R+  + +D ++    ++ L+ Y  + +L    L  +V   RP G  EG V  R   S+G L AF     G++ VL  M+ H S++ VQAV CWSLVNLAL   QK  +  + G+                          LV P+   ++  Q D                   ++  V+ A+  F +   ++   CLVLHN++L P ++  L A    + LL A   H  D  + + A  TLRRLG
Sbjct:  112 LAPELVVHILEYLPVNERXXXXXXXXXXXXAHNVRENINIWFPLCTAKPWQMSWSDLEERGYSTASEFRELHTNLIHAIDIARR--------GD---VAQVANIMKEFQDVIGLQYECLERLIIALHCERVRK--RAIDAKLASCVIYILQRYSHNTELQSMALHCIVFLARPIGGAEGMVFCRGVHSNG-LEAF--LYGGIDIVLDAMKNHISSSVVQAVGCWSLVNLALNRQQKIDILTKNGIQCIIRAMQIHPHCLDVQFRALFALINLVIPENVQQQFNQNDPHNTNTNNTFLPQDTISHDILDHVLIAMDRFGDSDKLIRCGCLVLHNLSLRPTNIPILQANNTSKPLLRAARTH-NDHDVQRSAISTLRRLG 472          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.670e-20
Identity = 105/367 (28.61%), Postives = 151/367 (41.14%), Query Frame = 1
Query:   73 LSPDALLELLSFLPHPEAQRTLQAPLSKVYLSSFTLEENIWKARCVKQ-WKVPPSTTCH----AWRTLHIDLVHCLSLVDGTGEETCGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKA--------VVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 1134
            L+PD +L +L +L      R    P  +      T    +W   C    W++  S   H    A R LH  +V     VD              +  I +++  +  +A +   CF  L   L+ E  R+    +D  +    + AL  + +  D+ +  L  +V   RP G  EG V  R  AS G L AF     G+ AVL  M  H  N+ VQA+ CWSLVNLAL   QK +L    G+                          LV P+  S   +  +TM          VV  V++A++ F     +V   CLVLHN++LD  ++  L+A G    L  A   H  DA + + A  TLRRL
Sbjct:  103 LTPDLMLYVLGYLDPKARHRAAANPACRQLRDRVTKNREVWAHLCSSTPWRIHRSDLEHRPVNALRRLHRTVVEATDSVDTAP-----------IADIARIMSDHARVAGVQVRCFRTLADRLHCETFRK--NALDCGVASSVVRALWKFDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMASRG-LDAFLGESGGIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEAGS---VSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSHK-DADVQRSAVSTLRRL 451          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.320e-17
Identity = 81/286 (28.32%), Postives = 128/286 (44.76%), Query Frame = 1
Query:  340 VVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSG-----DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-------TSEKIIQPDT--------MKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1134
            + +IV  +  + ++  +   C   L  LL  E+ R   +     + D  L  +  +P  V L       +VL  RP G  EG +      +   + + G +G      G+  +L  M R  S A +QA++CWSLVN+AL P QK  L + GG+                          LV P V       T +  I+ +         ++ +V +VV A++ + +   I+NRACLVLHN++L PG+   L+ I    ++L   +  + TD +L Q ATGTL RL
Sbjct:  854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQRMTAQRAG--LTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRL 1137          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO)

HSP 1 Score: 96.7 bits (239), Expect = 1.180e-16
Identity = 79/280 (28.21%), Postives = 126/280 (45.00%), Query Frame = 1
Query:  346 AIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGD-----GVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-----------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1134
            +IV  + A+  +  +   C   L  ++ +E  R A +     + ++ L A+  +PD   L       +VL  RP G  EG +      +   +   G   D     G+  +L  ++R   +  +QA++CWSLVN+AL P QK+ L + GG+                          LV P V            SEK +    +  VV +VV+A++ F +   I+NRACLVLHNI+L   + GAL+      ++L   +  + +D +L Q A GTL RL
Sbjct:  686 SIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQRAG--LTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRL 963          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC)

HSP 1 Score: 94.0 bits (232), Expect = 8.150e-16
Identity = 80/281 (28.47%), Postives = 126/281 (44.84%), Query Frame = 1
Query:  340 VVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPA-SDGPLRAFGPSG----DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTP----------DVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1134
            + +IV  + A+  +  +   C   L  LL  E+ R   +     + D  L A+ T+PD   L       +VL  RP G  EG +       S G   A   +      G+  +L  M+R + +  +QA++CWSLVN+AL P QK  L   GG+                          LV P          +V +EK +  +++  ++ +V+ A++ F     IVNRACLVLHN++L   +   L+      ++L   +  +PTD +L Q A+GTL RL
Sbjct:  726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQRAG--LTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRL 1004          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 6.770e-15
Identity = 78/289 (26.99%), Postives = 122/289 (42.21%), Query Frame = 1
Query:  340 VVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSG--DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVT---------------------SEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1134
            + +IV  + A+  +  +   C   L  LL  E  R   +     +    L  +  +PD V L       +VL  RP G  EG +      +   +   G  G  +G+  +L  M R  S   +QA++CWSLVN+AL P QK  L + GG+                          LV P V                      +E+ +  + +  +  +VV A++ F +  TI+NRACLVLHN++L   +   L+      ++L   +  +P+D +L QCA GTL RL
Sbjct:  355 IYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQRTTAQRAG--LTGIVLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRL 641          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: B8BQG5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQG5_THAPS)

HSP 1 Score: 88.6 bits (218), Expect = 4.440e-14
Identity = 84/308 (27.27%), Postives = 131/308 (42.53%), Query Frame = 1
Query:  319 GGGDYDNV--------VAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSG--DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV-------------------------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLH-AIGKHPTDALLIQCATGTLRRL 1134
            G G+ DNV         ++V  + A+  +  +   C   L +LL  E  R   +     + D  L A+  +PD ++L       LVL  RP G  EG +      +   +   G S   +G+  +L  M R   +  +QA++CWSLVN+AL P QK  L + GG+                          LV P                           TSEK +   ++  +  +VV A++ F +   I+NRACLVLHN++L+  +   L+      ++L   IG +P D +L Q A GT++RL
Sbjct: 1234 GAGEVDNVNLPWSCAIYSVVNWMVAFADVEGIQIMCLKVLPYLLEDESQRTTAQRAG--LTDSVLRAMVLFPDSIELHTVAFHTLVLLARPLGGNEGMLFHTAMVNTRGIFNEGSSSSKNGIVIMLDSMRRFAQDEILQAMSCWSLVNVALTPLQKTMLVKLGGLTVTANAMLQHPYNAEVQFRALFALINLVIPSEVRPEESEEMREIEREIFQQLGEVGDTSEKEMLDASVGQISNLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHSILLWTPNCYQMLEWCIGNYPHDHVLQQSAGGTIQRL 1539          
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.430e-13
Identity = 77/269 (28.62%), Postives = 114/269 (42.38%), Query Frame = 1
Query:  400 CFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVM-SRPPASDGPLRAFGPSG-DGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDV---------------------TSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPG-HLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRL 1134
            C   L  LL  E  R   +     + D  L  +  +PD V+L       LVL  RP G  EG +  S    + G       +G +G+  +L  M R   +  +QA++CWS+VN+ALIP QK  L + GG+                          LV P                       T+E+ +  + +  +  +VV A++ F +   I+NRACLVLHN++L+   H   L      + L   IG +  D +L Q A GTL+RL
Sbjct:    7 CLKVLPFLLEDENQRTTAQRAG--LTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHSAMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig597.16541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JC51_9PHAE5.650e-24198.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0Y6I8_AURAN3.360e-2536.36Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3JW95_9STRA5.960e-2025.93Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZUP6_9STRA7.670e-2028.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3LG40_9STRA4.320e-1728.32Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JKA1_FISSO1.180e-1628.21Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FR68_PHATC8.150e-1628.47Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6T9YI25_9STRA6.770e-1526.99Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
B8BQG5_THAPS4.440e-1427.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2MKG5_9STRA1.430e-1328.62Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig597contigEcto-sp13_S_contig597:15068..19512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score658.7
Seed ortholog evalue1.7e-186
Seed eggNOG ortholog2880.D7FLC7
Model size2731
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2C8IF@1,2S3J3@2759
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-12_007670.1
Cds size1143
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig597.16541.1prot_Ecto-sp13_S_contig597.16541.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig597 16656..19512 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463829.8214862-UTR-Ecto-sp13_S_contig597:15067..166551681463829.8214862-UTR-Ecto-sp13_S_contig597:15067..16655Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig597 15068..16655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463829.8353512-CDS-Ecto-sp13_S_contig597:16655..168831681463829.8353512-CDS-Ecto-sp13_S_contig597:16655..16883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig597 16656..16883 -
1681463829.8477998-CDS-Ecto-sp13_S_contig597:17148..175321681463829.8477998-CDS-Ecto-sp13_S_contig597:17148..17532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig597 17149..17532 -
1681463829.8588529-CDS-Ecto-sp13_S_contig597:17745..180901681463829.8588529-CDS-Ecto-sp13_S_contig597:17745..18090Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig597 17746..18090 -
1681463829.8709598-CDS-Ecto-sp13_S_contig597:19162..192251681463829.8709598-CDS-Ecto-sp13_S_contig597:19162..19225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig597 19163..19225 -
1681463829.8819876-CDS-Ecto-sp13_S_contig597:19389..195121681463829.8819876-CDS-Ecto-sp13_S_contig597:19389..19512Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig597 19390..19512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig597.16541.1

>prot_Ecto-sp13_S_contig597.16541.1 ID=prot_Ecto-sp13_S_contig597.16541.1|Name=mRNA_Ecto-sp13_S_contig597.16541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=381bp
MAIDKTFVGPGEMDGGDGGSSQGLLSPDALLELLSFLPHPEAQRTLQAPL
SKVYLSSFTLEENIWKARCVKQWKVPPSTTCHAWRTLHIDLVHCLSLVDG
TGEETCGGGDYDNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREA
VKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSR
PPASDGPLRAFGPSGDGVEAVLACMERHRSNAAVQAVACWSLVNLALIPG
QKRSLCRQGGVLAIVRAMARHPQDSEVHFRAMFALINLVTPDVTSEKIIQ
PDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGA
PEELLHAIGKHPTDALLIQCATGTLRRLGR*
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mRNA from alignment at Ecto-sp13_S_contig597:15068..19512-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig597.16541.1 ID=mRNA_Ecto-sp13_S_contig597.16541.1|Name=mRNA_Ecto-sp13_S_contig597.16541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig597:15068..19512- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGATTGACAAGACTTTCGTTGGGCCCGGTGAAATGGACGGGGGAGA CGGCGGCTCGTCCCAAGGGCTGCTGTCTCCCGACGCTCTACTAGAACTTC TTTCCTTCTTGCCGCACCCAGAGGTAAGTCGGCCTGCACGAACGGGGGGC TTTGCATGCTCTTGAAGTTTGGCAAATCGACGTGGCGGCACAGAGGACGA TCACAAGCGGTGCGCGCGCTATTCATACGTGCCACCACCGATGACAGAAT GTTGCACCCCTGCCCGGCCTGCGCGGATACCCTGCAGGCTCAAAGGACCC TGCAGGCGCCGCTCTCGAAGGTGTATCTGTCTTCTTTCACCCTTGAGGAG GTGAGGCTTCGTTCCTTGTGGACGACGGCTGCTGCAGAACAACTGTCACC CCTCGACTGTGGATATGATGGTACATATAACAGAAATCTTTTGCCCTGTC ACCCTTGATATCTACAACATGCATGTGTATTCTGAATTTGGTTCTTGAGC TTGCTAGAGTCGGCCCTAAAACCCGTTACAGATGACGCTTCTTGAGCATG GAGTATCGTATTGAAGGAGACATGTTCATCTCGACGAAAGTTTCTCTTTT GGAGCAGTTGAAGGGGGAGTAATCCGCGCTCGGACGACCCGGTCCCTGAC CGGATTTGTACGCCCAGACTTGGACCAACGTCGGACAAGATTAGTCCTGG AAGATCCAAGAACTGTCGGTTTGATGGGGTGAAAGCACCACCGGCATTAT TTTTCAGTTCCCTCGAGTTGTTCTAAAGGGGGGGAAAAAAAACACGTTTC TCGCACGTGCGTGCATCGGAACTACCTCCGCGGATCCATGCATGCATGCA TACGATTTTCCCCACTGTTCGCGCGTGCTTACGCACCCCCACATTGGCAC ACACAAAAGACTGCTGTGTGATGCAAACGAGAGAGAGATAACACGTGAAA CGGCACGACGAATATAGTTAGGATGTGTTTTTTTATTTCGCAAAGAGCAG TGTGTTCGTGGGGTTGAGGCAACAAGGGTGCACGGGCATGTCGCCTTCCA ACTCTTGTGTCCTTTGCCAGCCCCATCGTTTCGAGCCGTGCCCTGTTCGG TTGATCCGCAAGGTCCGAGATACACGCACTGCAGTGTAGACTGCTACCTC TCACGGCGTTTCATGTTTTCCCAACTTCATTTTAACCACCAGCTGGCTGT AATCCTACGCTAACCGGCGGTGAAATCGTGCTGTACCACAATCGCGCGTT GCATATGATGCTATGCATACACGCAGAACATCTGGAACATTCTCGTTCGT ATTCTTTGTTATCCCGAACAAATAACCAACCACCAACTAGCTGTAGGTCC TACGCTAACAGCAGTGGTTTCATACCACCACCGTCGCCCTTCGCACGTGA TGCCATGCATGGAGGCACGCAGAACATCTGGAAGGCGAGGTGCGTGAAAC AGTGGAAGGTGCCCCCCAGCACCACCTGCCACGCTTGGCGCACCCTCCAC ATCGACCTGGTGCATTGTCTGTCTCTTGTTGACGGCACCGGGGAGGAGAC TTGCGGCGGCGGCGACTACGACAATGTGGTCGCGATCGTGCAGGTGCTGG ACGCCTACCGTACCCTAGCCGAGATGACCCGCGCTTGCTTCGACAGGCTC GGCCACCTCCTGAACAGCGAAGAGGCCCGCGAGGCCGTCAAGTGCGTAGA CTGGCGCATCATGGACCACGCTCTCTGGGCGCTCAAGACGTACCCTGACG ACGTGGACCTGCTTCTGGTGAGTTCCGTCGAATAGAATCGAACCGTGCAT ACACCTCGGCCCCGTTGTGGGCAGCAATGATCTGGCGCGTGTGGAGACGA GTCAGCGAAACGGTGTTGCGAGCACGTGAGCCGCATGGGTCGCGTACCCA ATCCCTCGAACGAAATGTTGACGCTTCCTAAAAAAGAACAACAATTCCAT TTTCCCTGCGGTCGCTGCTCTTTTCGGCAGAAAATTCTCCGCTTCCTCGT CCTGGCCGGGCGCCCCGCGGGGCGCATGGAGGGGGCGGTGATGTCCCGCC CCCCCGCCTCGGACGGCCCCCTTCGGGCTTTCGGCCCCTCGGGGGATGGC GTGGAGGCGGTCCTGGCGTGCATGGAGAGGCACCGGTCTAACGCCGCGGT CCAGGCCGTGGCCTGCTGGTCGTTGGTCAACCTGGCGCTGATCCCCGGGC AGAAGAGATCCCTGTGCCGTCAGGGCGGGGTCCTCGCCATCGTGAGGGCG ATGGCCCGACACCCCCAGGACAGCGAGGTTCACTTCAGGGCCATGTTCGC TCTCATCAACCTGGTGACGCCGGACGTGACCTCGGAGAAGATCATCCAGC CGGACACCATGAAGGTGAGAGAGCACCAGAAAATCGTCCATCCCGGCATC ACCGAGTAAACGCCTCCCGAACGGGGGTGTCGAGGGGCCGGGAACGGCGT GGCGGCCCCGCGTCTCTGCCAACGGTAGGGTAGGGTAAGTTACTCTTCGC GCTTGCAGGTTACGCCTTTTTTTTCACATTGATGGCGTCGGAAGGAGGAC GCCGCGATGCTGACAGCCGTTGTTCGCGCTCTTGTGTTATGTTGGCCCGC TTGTCCCTGCACCGCCGTCCGTCCCTCAGGCCGTAGTCGCCATCGTTGTG TCGGCGATCCAAGCCTTCTCGAACATGGTCACCATCGTCAACCGGGCCTG CCTCGTCCTTCACAACATCGCCCTCGACCCCGGCCACCTTGGCGCTCTCG TGGCCATCGGTGCTCCGGAGGAGCTCCTCCACGCTATCGGCAAGCACCCC ACGGACGCCCTGCTGATCCAGTGCGCCACGGGCACTCTCCGCCGGCTCGG GCGCTGAAGGCAGCAGGAATCGGGAAACGAACGAGCGAACGGCCGACCGT GTGTTCCGCAGCAGCAGCGGTATCATATCAGCGAGCGAGCGTGTGTGTGA TGCGATCTCCGCGGTGAAGATGCGATCTCCGCGGTGAAGAATTCCCGAGC AAGTATATATTCAACTATCTGGTTTTTCACGCGCCTATGCTAGGTTGTCG CAACATACCTGCGCTGACTGTTGTAAAGGATAAGGAGCGGCTTGGCTGTA CGCAAAATTTGGAAGGGGGGGGGGTCAGAACTGTTTTACCAACGCTTGAG ACCGGGCGCTGCGTCTGACATTTGTATTTACGGCAGGCGTTAGAAGTGAT GTGTGCTGGGACTTGGCATCAGGTTTGCAGGTTCAGGTTGTCTTTTGTAA TTTTACGGTTTGATGTATAAGTGTTTCGTCTCGAGTGTCCGAAGCGAGAA CGGCAGCCGCAGCATGCTTGCTCTGTCTGTCAGCCTGTGCTTACTTTACC GCCGTCCGGTTAACCCCGACGTTGGGATTTTTTTGCACACCTATGGCGTA AGTACGAACGCGTCGTTGTAGACGAGTTATTTCTTGCATCTCGGCTGCTT GTTGATATGGATTTGATAGACAAGATGTAGATACGCGGGGATCCGCCAAG TGTGCTGCTCTCTTCTTCCCGAACGTGAAGATGAGATTATCATGGACATG AAGGCACACCCAAGTCTTGTGGGGGCGGGTGCCGTGGGAAGTGAGTCTTG CGCCTCTTCTTTTCGCTAGTGCCGTAAGCATTAATAATGAAAAAAAAACT ATTGGTCTCGTCCGTTGGACAAGGATCGCTGCCGTGAAGCCGTCGCTGAG ATAGATAATAGCTTGTAAAGGCGAGAGGTGGAATCAATTCCTGGTAGGCG GCGAATGCCATTCATTGTCTAGATGACACGAGAGAAGAGAAATCACACAA AGTAAACAAAAAACGGGGGAAATGTTGAGGAGACGTTGTTGCGGTATAGT ATTCGGTACACATGGTAGGAATCTTGAACGAAAAAATGTGATTCATGTCC GTCCGACTTTTGATACCGCACATGCACGGCGTATATGTATATAAGATCAG AACGTGTAAGGCGTGGGCCTGCCGTACCGTGCCGGTAGTTTGGCTGGGGC GGGAGGGGATATAGAGGGATAGATTCGGATGTTATGCTAGTGCCGCCATG TTCGCCAGGGGCTACCCCGGGGGGGGGGGGGCAAAGAGGGTATGAGAACG GGCAGACTGAAACAGGAGCAGGCAGGGAAGGTACCAAGTGAACAGCAAGA GGGGTCAATACCCATGACCTTGCGTGATTGAATAATTTCAGATTTGAAAA CGAAGAGAAGCTCTTGCTCGTTTTGAGATGATGATAATCATCATGGATGG ACGACAACGCTGTCTACTTCTTCCGGAAGTGAGAAGCAACGTGCTCGTGC GCCCCGCTGTGTGTGCGGGATTGACGAACGATTTTTGTTGTGCTGGATTT GCCTGACGGGCACGCTGTAGTAAGCAACGCACCTTTCTCCCTGGGGTGTC GTCCACACCCTGCCTCTTGGGCCTTAACCAATCGTGTCTGCCAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig597:15068..19512-

>mRNA_Ecto-sp13_S_contig597.16541.1 ID=mRNA_Ecto-sp13_S_contig597.16541.1|Name=mRNA_Ecto-sp13_S_contig597.16541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp13_S_contig597:15068..19512- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGATTGACAAGACTTTCGTTGGGCCCGGTGAAATGGACGGGGGAGA
CGGCGGCTCGTCCCAAGGGCTGCTGTCTCCCGACGCTCTACTAGAACTTC
TTTCCTTCTTGCCGCACCCAGAGGCTCAAAGGACCCTGCAGGCGCCGCTC
TCGAAGGTGTATCTGTCTTCTTTCACCCTTGAGGAGAACATCTGGAAGGC
GAGGTGCGTGAAACAGTGGAAGGTGCCCCCCAGCACCACCTGCCACGCTT
GGCGCACCCTCCACATCGACCTGGTGCATTGTCTGTCTCTTGTTGACGGC
ACCGGGGAGGAGACTTGCGGCGGCGGCGACTACGACAATGTGGTCGCGAT
CGTGCAGGTGCTGGACGCCTACCGTACCCTAGCCGAGATGACCCGCGCTT
GCTTCGACAGGCTCGGCCACCTCCTGAACAGCGAAGAGGCCCGCGAGGCC
GTCAAGTGCGTAGACTGGCGCATCATGGACCACGCTCTCTGGGCGCTCAA
GACGTACCCTGACGACGTGGACCTGCTTCTGAAAATTCTCCGCTTCCTCG
TCCTGGCCGGGCGCCCCGCGGGGCGCATGGAGGGGGCGGTGATGTCCCGC
CCCCCCGCCTCGGACGGCCCCCTTCGGGCTTTCGGCCCCTCGGGGGATGG
CGTGGAGGCGGTCCTGGCGTGCATGGAGAGGCACCGGTCTAACGCCGCGG
TCCAGGCCGTGGCCTGCTGGTCGTTGGTCAACCTGGCGCTGATCCCCGGG
CAGAAGAGATCCCTGTGCCGTCAGGGCGGGGTCCTCGCCATCGTGAGGGC
GATGGCCCGACACCCCCAGGACAGCGAGGTTCACTTCAGGGCCATGTTCG
CTCTCATCAACCTGGTGACGCCGGACGTGACCTCGGAGAAGATCATCCAG
CCGGACACCATGAAGGCCGTAGTCGCCATCGTTGTGTCGGCGATCCAAGC
CTTCTCGAACATGGTCACCATCGTCAACCGGGCCTGCCTCGTCCTTCACA
ACATCGCCCTCGACCCCGGCCACCTTGGCGCTCTCGTGGCCATCGGTGCT
CCGGAGGAGCTCCTCCACGCTATCGGCAAGCACCCCACGGACGCCCTGCT
GATCCAGTGCGCCACGGGCACTCTCCGCCGGCTCGGGCGCTGA
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