prot_Ecto-sp13_S_contig5969.16538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5969.16538.1
Unique Nameprot_Ecto-sp13_S_contig5969.16538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: D8LBE9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE9_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 2.770e-90
Identity = 149/159 (93.71%), Postives = 153/159 (96.23%), Query Frame = 0 
Query:    1 MKSFLFMAIILLAAVLQTSNGFVVAPSSSLNVRRQSHSGMQMLXXXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            MKSFLF+A+I+LAAVLQ SNGFVVAPSSSLNVRRQSHSGMQML  XXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLL+K K P SYRLSCCTMVSGPVTVQTKP
Sbjct:    1 MKSFLFVALIVLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: A0A836CNT2_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.250e-38
Identity = 77/146 (52.74%), Postives = 94/146 (64.38%), Query Frame = 0 
Query:   14 AVLQTSNGFVVAPSSSLNVRRQSHSGMQMLXXXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            +V+  +  F+VAP+    V+R + +   +              I V VQQK  FK+T + +    NLRKALM   I+IYPLQGKIYNCGGGGSCGTC VNV AG  NCSPKGP EKKLL  K  P++YRLSCCT V+G +TV TKP
Sbjct:   15 SVMLAAEAFLVAPALQRPVQRDTLTPRMLFGKKAAPAKSKG--IEVTVQQKY-FKDTVVAMEQPGNLRKALMGAGIEIYPLQGKIYNCGGGGSCGTCTVNVVAGGNNCSPKGPAEKKLLGNK--PETYRLSCCTKVNGNITVATKP 155
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: A0A7S2UXM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.210e-36
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 0 
Query:    6 FMAIILLAAVLQTSNGFVVAPSSSLNVRRQSHSGMQMLXXXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            F  +I L   +  ++ F+    +   V+  S + +QML               + V+Q+ GF + +L   G  NLRK LM  KIDIYPLQGK+ NCGGGG CGTCAV V  GA N SPK P EKK+L KK  P++YRLSCCT VSG  TV+TKP
Sbjct:    3 FTVVIFLVCAISGASAFLGQSLALNRVQASSSTSLQMLFGSKKKAAPVKGKYSITVKQR-GFTDFDLETEGTANLRKTLMAQKIDIYPLQGKLTNCGGGGVCGTCAVEVMDGANNLSPKAPNEKKVLSKK--PENYRLSCCTRVSGACTVRTKP 153
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: W7TM71_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM71_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.820e-30
Identity = 63/103 (61.17%), Postives = 71/103 (68.93%), Query Frame = 0 
Query:   59 VKVQQKTGFKETELTL--AGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            V VQQK  +K  EL +      NLRK LM NKIDIYPLQGKIYNCGGGG CGTCA+ +  GA+N +PK P E K L  KK  D  RL+CCT  SG VTV+TKP
Sbjct:   58 VTVQQKF-YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKG-DDIRLACCTRASGDVTVKTKP 158
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: M1VFK1_CYAM1 (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VFK1_CYAM1)

HSP 1 Score: 113 bits (282), Expect = 1.570e-28
Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:   78 TNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            +NLRK L++NKID+Y L+GK+ NCGGGG CGTC V++  G  N +P+G  E ++ E K++PDS+RLSCCT + GP+TV+TKP
Sbjct:  109 SNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: UPI00055BF685 ((2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055BF685)

HSP 1 Score: 99.0 bits (245), Expect = 5.350e-24
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:   70 TELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            TE+  A  +NLR+  + N +DIY L+GK+ NCGG G C TC V++  G +N SP+   E+K L KK  PDSYRLSC T+V GP+TV+TKP
Sbjct:   17 TEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRLGKK--PDSYRLSCQTVVKGPITVRTKP 104
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: A0A835YVE2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.210e-22
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:   79 NLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            NLRK L+DNK+D+Y    K+  CGGGG+CGTC V V  G +NCS KG GE+K+L  K      RL+CCT V+GPV+V  KP
Sbjct:   40 NLRKLLLDNKVDLYKPLDKLKQCGGGGTCGTCRVRVTEGMENCSKKGLGEEKML--KAVGADIRLACCTRVTGPVSVTVKP 118
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: A0A2T2RV34_9CYAN (Iron ABC transporter substrate-binding protein n=1 Tax=Cyanobacteria bacterium QH_9_48_43 TaxID=1919126 RepID=A0A2T2RV34_9CYAN)

HSP 1 Score: 93.2 bits (230), Expect = 9.260e-22
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 0 
Query:   69 ETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            + E+  A  TNLR+  ++N ID+Y L+GK+ NCGG G CGTC V V  G +N S +   EK+  +KK  PDSYRLSC T+V+G V+V TKP
Sbjct:   10 DKEVVAAEGTNLREKALENGIDVYTLKGKLTNCGGDGQCGTCIVEVVEGMENLSERTEPEKQKFKKK--PDSYRLSCQTLVNGSVSVITKP 98
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BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: A0A218QTJ0_9CYAN (Ferredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A218QTJ0_9CYAN)

HSP 1 Score: 92.4 bits (228), Expect = 1.660e-21
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:   71 ELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVSGPVTVQTKP 159
            E+  A   NLR   M N IDIY   GK+ NCGGGG+CGTC V +  G +N SP+   E ++L+KK  P++YRL+C T+V+G V+V TKP
Sbjct:   12 EVIAANGANLRLKAMQNNIDIYKFIGKMTNCGGGGNCGTCIVEIVEGIENLSPRTDAENRILKKK--PENYRLACQTVVNGAVSVVTKP 98
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Match: K9YSI2_DACSA (Ferredoxin n=2 Tax=Cyanobacteria TaxID=1117 RepID=K9YSI2_DACSA)

HSP 1 Score: 91.3 bits (225), Expect = 5.250e-21
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0 
Query:   69 ETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVS-GPVTVQTKP 159
            + E+  A   NLR+  ++N++DIY  +GK+ NCGG G CGTC V V  G +N S + P E+K L+KK  PDSYRLSC T+V+ G V++ TKP
Sbjct:   10 DKEVIAADGANLREKALENRVDIYTFRGKMLNCGGYGQCGTCVVEVVEGMENLSERTPAEQKKLKKK--PDSYRLSCQTIVNHGDVSIVTKP 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5969.16538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBE9_ECTSI2.770e-9093.71Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CNT2_9STRA1.250e-3852.74Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S2UXM9_9STRA2.210e-3647.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TM71_9STRA2.820e-3061.17Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
M1VFK1_CYAM11.570e-2857.322Fe-2S ferredoxin-type domain-containing protein n... [more]
UPI00055BF6855.350e-2453.33(2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. G... [more]
A0A835YVE2_9STRA7.210e-2255.562Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2T2RV34_9CYAN9.260e-2251.65Iron ABC transporter substrate-binding protein n=1... [more]
A0A218QTJ0_9CYAN1.660e-2150.56Ferredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=... [more]
K9YSI2_DACSA5.250e-2150.00Ferredoxin n=2 Tax=Cyanobacteria TaxID=1117 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 56..159
e-value: 3.2E-18
score: 67.5
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 98..149
e-value: 1.5E-7
score: 31.3
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 57..159
score: 9.098
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 67..159
NoneNo IPR availablePANTHERPTHR23426:SF49coord: 67..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.88
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 69..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5969contigEcto-sp13_S_contig5969:4159..7765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5969.16538.1mRNA_Ecto-sp13_S_contig5969.16538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5969 4159..7765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5969.16538.1 ID=prot_Ecto-sp13_S_contig5969.16538.1|Name=mRNA_Ecto-sp13_S_contig5969.16538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
MKSFLFMAIILLAAVLQTSNGFVVAPSSSLNVRRQSHSGMQMLFGGGGAK
KKAAGGIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYN
CGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLEKKKSPDSYRLSCCTMVS
GPVTVQTKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0360102Fe-2S_ferredoxin-like_sf