prot_Ecto-sp13_S_contig5969.16537.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5969.16537.1
Unique Nameprot_Ecto-sp13_S_contig5969.16537.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length455
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5969.16537.1 vs. uniprot
Match: D8LBE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE8_ECTSI)

HSP 1 Score: 691 bits (1783), Expect = 1.010e-244
Identity = 353/389 (90.75%), Postives = 359/389 (92.29%), Query Frame = 0 
Query:   66 HRYDGGANMRNVSRGGGRGFPGGGRGRTMAKSGAREKGDRYGGAEPVKSSGRMSITFTRQDGGGGAKQRGRXXEYDRMXXXXXXGRGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSRTKRRDVISHSAAGDSEDKLGGGSSYRERVDRSSNKLVAANKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYCRTGATDEAIAPTPVPQSAGYINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTFVEDPRFRPAGRGNSGADNGRNVSSSKPSPETGGDMIRHDEGDEMHVDESASGRGWA 454
            HRYDGGA MRNVSRGGGRGFP             REKGDRYGG EPVKSSGRMSITFTRQDGGGGAKQRGR  EYDRM  XXX GRGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSR KRRDVISH +AGDSEDK+G G SYRERVDRSSNKLVAANKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYC TGA DE IAPTPV QSAGYINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTFVEDPRFR AGRG+S ADNGRNVSSSKPSPE+GGDM+RHDEGDEMH+DESASGRGWA
Sbjct:  255 HRYDGGAKMRNVSRGGGRGFPXXXXXXXXXXXXXREKGDRYGGGEPVKSSGRMSITFTRQDGGGGAKQRGRGGEYDRMREXXXGGRGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSRAKRRDVISHCSAGDSEDKVGAGGSYRERVDRSSNKLVAANKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYCHTGANDEVIAPTPVQQSAGYINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTFVEDPRFRAAGRGDS-ADNGRNVSSSKPSPESGGDMVRHDEGDEMHMDESASGRGWA 642
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BLAST of mRNA_Ecto-sp13_S_contig5969.16537.1 vs. uniprot
Match: A0A6H5JHP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP0_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 3.100e-133
Identity = 212/227 (93.39%), Postives = 214/227 (94.27%), Query Frame = 0 
Query:   66 HRYDGGANMRNVSRGGGRGFPGGGRGRTMAKSGAREKGDRYGGAEPVKSSGRMSITFTRQDGGGGAKQRGRXXEYDRMXXXXXXGRGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSRTKRRDVISHSAAGDSEDKLGGGSSYRERVDRSSNKLVAANKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKS 292
            HRYDGGANMRNVSRGGGRGFPGGGR RTMAK G REKGDRYGG EPVKSSGRMSITFTRQDGGGGAKQRGR  EYDRM  XXX GRGEALKGGAGRDRDGMKGD+F+PIGRHKEKDSDVGGSRTKRRDVISHSAAGDSEDKLG G SYRERVDRSSNKLVA NKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFED TLSVELMRVRCDVCYHEKS
Sbjct:  279 HRYDGGANMRNVSRGGGRGFPGGGRSRTMAKGGVREKGDRYGGGEPVKSSGRMSITFTRQDGGGGAKQRGRGGEYDRMREXXXGGRGEALKGGAGRDRDGMKGDNFIPIGRHKEKDSDVGGSRTKRRDVISHSAAGDSEDKLGAGGSYRERVDRSSNKLVAVNKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDVTLSVELMRVRCDVCYHEKS 505
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BLAST of mRNA_Ecto-sp13_S_contig5969.16537.1 vs. uniprot
Match: A0A835Z2T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.610e-32
Identity = 77/212 (36.32%), Postives = 102/212 (48.11%), Query Frame = 0 
Query:  233 EVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYCRT---------------------GATDEAIAP------------TPVPQSAG----------------YINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKD 395
            EV +  W  Q+Q+ +ERPNL HWRD++ A  ++  +D E   L+ +LM +RC VCY EK DGD+FCWN +C  SP+F  + +                      G  D+++               P  Q +G                Y NTF R TL+D AL   L APVKWLE KR++           PALYRWQCWASL  +P   D
Sbjct:  563 EVARRQWDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSD 774
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5969.16537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBE8_ECTSI1.010e-24490.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHP0_9PHAE3.100e-13393.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2T4_9STRA2.610e-3236.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5969contigEcto-sp13_S_contig5969:3..3079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5969.16537.1mRNA_Ecto-sp13_S_contig5969.16537.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5969 3..3079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5969.16537.1 ID=prot_Ecto-sp13_S_contig5969.16537.1|Name=mRNA_Ecto-sp13_S_contig5969.16537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=455bp
SRNRSSRSTARTAHSSSDSSGQDDDGDEHDNGRSTRRRRRAPMDDDSDFE
DANQGDDEDDDGDDDHRYDGGANMRNVSRGGGRGFPGGGRGRTMAKSGAR
EKGDRYGGAEPVKSSGRMSITFTRQDGGGGAKQRGRGGEYDRMRERERGG
RGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSRTKRRDVISHSAA
GDSEDKLGGGSSYRERVDRSSNKLVAANKKDEEVIKSSWVHQMQKAKERP
NLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWN
EKCWMSPVFSGYCRTGATDEAIAPTPVPQSAGYINTFGRETLIDPALTSA
LQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTFVE
DPRFRPAGRGNSGADNGRNVSSSKPSPETGGDMIRHDEGDEMHVDESASG
RGWA*
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