prot_Ecto-sp13_S_contig59633.16527.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59633.16527.1
Unique Nameprot_Ecto-sp13_S_contig59633.16527.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: D7G588_ECTSI (Histidyl-tRNA Synthetase Similar to Histidine Ammonia-Lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G588_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.320e-22
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTK 50
            VAALTCEATRANTAPFDA+NFDVRPHRGQIACADRLRLML+GSKSAN TK
Sbjct:  196 VAALTCEATRANTAPFDALNFDVRPHRGQIACADRLRLMLDGSKSANSTK 245          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: W7TTH8_9STRA (Histidine ammonia-lyase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTH8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.780e-7
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 AALTCEATRANTAPFDAINFDV-RPHRGQIACADRLRLMLEGSKSANPTKASK 53
            AA+ CE T A+  PF A++FD+ RPHRGQ+A A  LRL+LEGS    P   +K
Sbjct:  204 AAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAK 256          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A4D9D9L7_9STRA (tRNA-synt_His domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.700e-7
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    2 AALTCEATRANTAPFDAINFDV-RPHRGQIACADRLRLMLEGSKSANP 48
            AA+ CE T A+  PF A++FD+ RPHRGQ+A A  LRL+LEGS    P
Sbjct:  192 AAVACEVTHASLEPFQAVHFDMHRPHRGQMATAMNLRLLLEGSAVVRP 239          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A1W0A0Z3_9STRA (Histidine--tRNA ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0Z3_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.740e-7
Identity = 29/48 (60.42%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDV-RPHRGQIACADRLRLMLEGSKSAN 47
            VAALTCE T+A TAPF+    D  RPHRG I  A  LR ML+GSK+ N
Sbjct:  189 VAALTCEVTKAQTAPFNVEFHDATRPHRGIITSATNLRAMLDGSKATN 236          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A349P4U4_9FLAO (Histidine ammonia-lyase n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A349P4U4_9FLAO)

HSP 1 Score: 53.1 bits (126), Expect = 9.480e-7
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTKAS 52
            ++AL+ +A   N +PFD +   VRPHRGQI  ADR+R +LEGS+ A   KAS
Sbjct:  224 ISALSMDAFNCNLSPFDELVHFVRPHRGQIKTADRIREILEGSEIAEDEKAS 275          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A840EQX0_9FLAO (Histidine ammonia-lyase n=1 Tax=Mesonia hippocampi TaxID=1628250 RepID=A0A840EQX0_9FLAO)

HSP 1 Score: 50.4 bits (119), Expect = 8.500e-6
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTK 50
            ++ ++ EA   N++PF A+  D+RPHRGQI  A+R+R  LEGS+  N  K
Sbjct:  224 ISTISLEAYDGNSSPFTALVHDIRPHRGQIQTAERVRSFLEGSQLINQPK 273          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A6G0XS38_9STRA (Histidine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XS38_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 5.620e-5
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSA 46
            VAALTCEA +A++ PF   +   RPHRG I  A  LR+ML+ SK A
Sbjct:  192 VAALTCEALKASSFPFQEAHDVDRPHRGMITVAANLRVMLDNSKFA 237          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: A0A1L3J3D2_9FLAO (Histidine ammonia-lyase n=1 Tax=Gramella salexigens TaxID=1913577 RepID=A0A1L3J3D2_9FLAO)

HSP 1 Score: 47.8 bits (112), Expect = 7.640e-5
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTKAS 52
            + A++ +A   N +PFD +   VRPHRGQ+  A+R+R  LEGS+ A   K S
Sbjct:  224 IGAISIDAFDCNLSPFDELVHIVRPHRGQVKTAERIRTFLEGSEIAQTEKES 275          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: UPI0016726961 (histidine ammonia-lyase n=1 Tax=Salinimicrobium marinum TaxID=680283 RepID=UPI0016726961)

HSP 1 Score: 47.8 bits (112), Expect = 7.640e-5
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTK 50
            + AL+ +A   NT PFD +   VRPHRGQI  A R+R  LEGS+ A   K
Sbjct:  224 IGALSIDAFDCNTDPFDELVHMVRPHRGQIKTAGRIRQFLEGSEIAKQHK 273          
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Match: H2BYK3_GILLR (Histidine ammonia-lyase n=1 Tax=Gillisia limnaea (strain DSM 15749 / LMG 21470 / R-8282) TaxID=865937 RepID=H2BYK3_GILLR)

HSP 1 Score: 47.8 bits (112), Expect = 7.640e-5
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTKAS 52
            ++A++ +A   N +PFD +   VRPHRGQI  A+RLR +L GS+ A   KAS
Sbjct:  224 ISAISIDAFDCNMSPFDELVHMVRPHRGQIKTAERLREILTGSELAAQEKAS 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59633.16527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G588_ECTSI1.320e-2294.00Histidyl-tRNA Synthetase Similar to Histidine Ammo... [more]
W7TTH8_9STRA1.780e-752.83Histidine ammonia-lyase n=2 Tax=Nannochloropsis ga... [more]
A0A4D9D9L7_9STRA2.700e-756.25tRNA-synt_His domain-containing protein n=1 Tax=Na... [more]
A0A1W0A0Z3_9STRA3.740e-760.42Histidine--tRNA ligase (Fragment) n=1 Tax=Thrausto... [more]
A0A349P4U4_9FLAO9.480e-751.92Histidine ammonia-lyase n=3 Tax=Flavobacteriaceae ... [more]
A0A840EQX0_9FLAO8.500e-646.00Histidine ammonia-lyase n=1 Tax=Mesonia hippocampi... [more]
A0A6G0XS38_9STRA5.620e-554.35Histidine--tRNA ligase n=1 Tax=Aphanomyces euteich... [more]
A0A1L3J3D2_9FLAO7.640e-544.23Histidine ammonia-lyase n=1 Tax=Gramella salexigen... [more]
UPI00167269617.640e-550.00histidine ammonia-lyase n=1 Tax=Salinimicrobium ma... [more]
H2BYK3_GILLR7.640e-548.08Histidine ammonia-lyase n=1 Tax=Gillisia limnaea (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001106Aromatic amino acid lyasePFAMPF00221Lyase_aromaticcoord: 1..46
e-value: 1.2E-10
score: 40.7
NoneNo IPR availableGENE3D1.20.200.10coord: 1..53
e-value: 3.4E-11
score: 44.9
IPR008948L-Aspartase-likeSUPERFAMILY48557L-aspartase-likecoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59633contigEcto-sp13_S_contig59633:605..763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59633.16527.1mRNA_Ecto-sp13_S_contig59633.16527.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59633 605..763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59633.16527.1 ID=prot_Ecto-sp13_S_contig59633.16527.1|Name=mRNA_Ecto-sp13_S_contig59633.16527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
VAALTCEATRANTAPFDAINFDVRPHRGQIACADRLRLMLEGSKSANPTK
ASK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001106Aromatic_Lyase
IPR008948L-Aspartase-like