prot_Ecto-sp13_S_contig11939.1652.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11939.1652.1
Unique Nameprot_Ecto-sp13_S_contig11939.1652.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11939.1652.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.790e-30
Identity = 75/107 (70.09%), Postives = 83/107 (77.57%), Query Frame = 0 
Query:   26 MERDQQQRQVSGRGLETGRLPTIPCSSNSNPATNTLPWRERRRARQSQPLRRPSAATTGLASATAIRTAMTTIACVVVAGVFLAVRSPHGIRPLQRGEEAAPPTRTG 132
            MERDQQQRQV GRGLE+GRL T P   +SNPAT+T PWRE+R AR+  PLRRPSA T+GLASAT          CVVVAGVFLAVRSP+GI+PLQRGEEA PPT  G
Sbjct:    1 MERDQQQRQVPGRGLESGRLSTTP---SSNPATDTQPWREQRWARRPPPLRRPSATTSGLASATXXXXXXXXXXCVVVAGVFLAVRSPNGIQPLQRGEEA-PPTSAG 103
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11939.1652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDR2_9PHAE3.790e-3070.09Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..199
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11939contigEcto-sp13_S_contig11939:2935..3531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11939.1652.1mRNA_Ecto-sp13_S_contig11939.1652.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11939 2935..3531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11939.1652.1 ID=prot_Ecto-sp13_S_contig11939.1652.1|Name=mRNA_Ecto-sp13_S_contig11939.1652.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
SASATAQEAERSRRAPSVCTQTTHQMERDQQQRQVSGRGLETGRLPTIPC
SSNSNPATNTLPWRERRRARQSQPLRRPSAATTGLASATAIRTAMTTIAC
VVVAGVFLAVRSPHGIRPLQRGEEAAPPTRTGSACPPPPPPPPLLLPRRA
AGDRRFRVGEAVAASGGSGPRIGGETRTASALAEELGGGGGGDDTTNTA
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