prot_Ecto-sp13_S_contig596.16519.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig596.16519.1
Unique Nameprot_Ecto-sp13_S_contig596.16519.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length543
Homology
BLAST of mRNA_Ecto-sp13_S_contig596.16519.1 vs. uniprot
Match: D7FGU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU7_ECTSI)

HSP 1 Score: 870 bits (2249), Expect = 9.340e-316
Identity = 456/543 (83.98%), Postives = 483/543 (88.95%), Query Frame = 0
Query:    1 MEPKEYLIPAEKVRRRPNIYHSPAFGVPMWAGRAQPPLTRFARDVRAFLRGKGTGGTGRVEEAYPVGVARARESEHVTVDAIRRVGT-GAIGEDEGRWQALVRFQPRKTSERDDQSVFQSLGLEVGQEVRGGTVVSSVVSVVKGGLLSQWSVAPGMEVIDDGSKGHVTIAMETPFRPLGDLSDDEEEKENIPPPLPAYVGGMASTTHQCQSSFAKMLLSMYFTANETLLEGACRYKTDAELSPPCGKAERTALAARKKAFLDSLPGKLGLDVIGREEGQGRSGLIQVISVAPESLADYYGVRVEDTIVGVNGYPLIRLSRAGFFGKVAKALTTCASGTPSGGVLRLFLVRKGKSPPLLTKAQISKSRASPSPSPPWEANKVPAAPACSPRVKRAPRRQTRVGGKDRQQHYKRWDEASPTDAVPQISVEAAAXXXXXXXQGRAERKELRKRPLWWDKRAKGSTLCVLRLRPAKAAGRLDPEQRVQEDQGTRGHVPGKELDVAFACLNMLDFRPVGSELHSSKKCKMFIPRPHLDTRCHSPRNLL 542
            MEPKEYL P +KVRRRPNIYHSPAFGVPM AGR QPPLTRFARDVRAFLRGKGT G GRVEEAYPVGVARARE+EHVTVDAIR++GT GAIGE+EG WQALV+FQPRKTSERDDQSVFQSLGLEV QEVRGGTV SSV SVV+GGLLSQW VAPGMEVIDDG KGHVTIAMETPFRP+G+LSD +EEKENIPPP PAYVGG+A TTHQ  +SFA+MLLSMYFTANETLLEGA  YKTDAELSPPCGKAERT LAARKKAFLDSLPGKLGLDVIG EEG+GRSGLIQVISVAPESLAD+YGVRV+D +VG+NGYPL+RLSRAGF GKVAKALTTCASGTPSGGVLR FLVRK KSPPLLTKAQISKSRASPSPSPPWEAN+VP APA  P        QTR   KDRQQHYKRWDEASP DAVPQISVEAA XXXXXXX        LRKRPLWW+KRAKGSTLCVLRLRPAKAA RLDP+ R QEDQG+RGHVPGK+LDVAFAC+ MLDFRPVGSELH+SK+  MFIPR  LDTRCH PRN L
Sbjct:    1 MEPKEYLKPVDKVRRRPNIYHSPAFGVPMGAGRPQPPLTRFARDVRAFLRGKGTVGAGRVEEAYPVGVARARETEHVTVDAIRKIGTVGAIGEEEGCWQALVQFQPRKTSERDDQSVFQSLGLEVDQEVRGGTVASSVASVVEGGLLSQWGVAPGMEVIDDGGKGHVTIAMETPFRPIGNLSDVDEEKENIPPPTPAYVGGIALTTHQYGNSFAEMLLSMYFTANETLLEGAFSYKTDAELSPPCGKAERTVLAARKKAFLDSLPGKLGLDVIGGEEGRGRSGLIQVISVAPESLADFYGVRVQDALVGINGYPLVRLSRAGFLGKVAKALTTCASGTPSGGVLRFFLVRKSKSPPLLTKAQISKSRASPSPSPPWEANEVPKAPARPPXXXXXXXXQTRARRKDRQQHYKRWDEASPMDAVPQISVEAAXXXXXXXXXXXXXXXXLRKRPLWWEKRAKGSTLCVLRLRPAKAAERLDPKGREQEDQGSRGHVPGKKLDVAFACMVMLDFRPVGSELHASKERSMFIPRSRLDTRCHIPRNRL 543          
BLAST of mRNA_Ecto-sp13_S_contig596.16519.1 vs. uniprot
Match: A0A6H5KJS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS0_9PHAE)

HSP 1 Score: 511 bits (1315), Expect = 9.750e-175
Identity = 307/496 (61.90%), Postives = 332/496 (66.94%), Query Frame = 0
Query:   29 MWAGRAQPPLTRFARDVRAFLRGKGTGGTGRVEEAYPVGVARARESEHVTVDAIRRVGT-GAIGEDEGRWQALVRFQPRKTSERDDQSVFQSLGLEVGQEVRGGTVVSSVVSVVKGGLLSQWSVAPGMEVIDDGSKGHVTIAMETPFRPLGDLSDDEEEKENIPPPLPAYVGGMASTTHQCQSSFAKMLLSMYFTANETLLEGACRYKTDAELSPPCGKAERTALAARKKAFLDSLPGKLGLDVIGREEGQGRSGLIQ------------------------VISVAPESLADYYGVRVEDTIVGVNGYPLIRLSRAGFFGKVAKALTTCASGTPSGGVLRLFLVRKGKSPPLLTKAQISKSRASPSPSPPWEANKVPAAPACSPRVKRAPRRQTRVGGKDRQQHYKRWDEASPTDAVPQISVEAAAXXXXXXX--QGRAERKELRKRPLWWDKRAKGSTLCVLRLRPAKAAGRLDPEQRVQEDQGTRGHVPGKEL 497
            MWAGR QPPLTRFARDVRAFLRGKGTGGTGRVEEAYPVGVARARE+EH+TVD IR+VGT GAIGE+EG WQALVRFQ  KTS                                                   G KGHVTIAMET FRPLGDLSDD+EE+E+I PP PAYVGG+A TTHQC  SFA MLLSMYFTANETLLEGA  YKTDAEL PPCGKAERTALAARKKAFLDSLPGKLGLDV+G EEGQGRSGLIQ                        V SV PESL D+YGVRVEDTIVG+NGYPLIRLSRAGF GKVAKALTTCASGTPSGGVL LFLVRK       ++   S+ R S       ++   P AP                G +         + A+P D           XXXXXXX  QGRAERKELRKRPLWWDKRAKGSTLC+LRLRPAKAA RL+PE+RVQEDQG+RGHVPG+ +
Sbjct:    1 MWAGRPQPPLTRFARDVRAFLRGKGTGGTGRVEEAYPVGVARARETEHITVDTIRKVGTVGAIGEEEGCWQALVRFQLCKTSA--------------------------------------------------GGKGHVTIAMETSFRPLGDLSDDDEEREDINPPPPAYVGGIALTTHQCHKSFANMLLSMYFTANETLLEGAFSYKTDAELLPPCGKAERTALAARKKAFLDSLPGKLGLDVMGGEEGQGRSGLIQALLATPQAVLGDGLVDNNNESMFQVTSVTPESLVDFYGVRVEDTIVGINGYPLIRLSRAGFLGKVAKALTTCASGTPSGGVLPLFLVRKR------SRLHFSRKRRSLK-----QSLSKPLAPLGG-----------EWGARGSDPPPPGEESAAPADKXXXXXXXXXXXXXXXXXXXQGRAERKELRKRPLWWDKRAKGSTLCILRLRPAKAAERLNPERRVQEDQGSRGHVPGEPM 424          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig596.16519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGU7_ECTSI9.340e-31683.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJS0_9PHAE9.750e-17561.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 257..363
e-value: 2.6E-7
score: 32.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 265..316
score: 8.526
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 265..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig596contigEcto-sp13_S_contig596:7533..12332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig596.16519.1mRNA_Ecto-sp13_S_contig596.16519.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig596 7533..12332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig596.16519.1 ID=prot_Ecto-sp13_S_contig596.16519.1|Name=mRNA_Ecto-sp13_S_contig596.16519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp
MEPKEYLIPAEKVRRRPNIYHSPAFGVPMWAGRAQPPLTRFARDVRAFLR
GKGTGGTGRVEEAYPVGVARARESEHVTVDAIRRVGTGAIGEDEGRWQAL
VRFQPRKTSERDDQSVFQSLGLEVGQEVRGGTVVSSVVSVVKGGLLSQWS
VAPGMEVIDDGSKGHVTIAMETPFRPLGDLSDDEEEKENIPPPLPAYVGG
MASTTHQCQSSFAKMLLSMYFTANETLLEGACRYKTDAELSPPCGKAERT
ALAARKKAFLDSLPGKLGLDVIGREEGQGRSGLIQVISVAPESLADYYGV
RVEDTIVGVNGYPLIRLSRAGFFGKVAKALTTCASGTPSGGVLRLFLVRK
GKSPPLLTKAQISKSRASPSPSPPWEANKVPAAPACSPRVKRAPRRQTRV
GGKDRQQHYKRWDEASPTDAVPQISVEAAAAAAAAAAQGRAERKELRKRP
LWWDKRAKGSTLCVLRLRPAKAAGRLDPEQRVQEDQGTRGHVPGKELDVA
FACLNMLDFRPVGSELHSSKKCKMFIPRPHLDTRCHSPRNLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf