prot_Ecto-sp13_S_contig5959.16517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5959.16517.1
Unique Name	prot_Ecto-sp13_S_contig5959.16517.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	325

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: D7FTL6_ECTSI (Myb protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL6_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 1.900e-166
Identity = 236/292 (80.82%), Postives = 251/292 (85.96%), Query Frame = 0

Query:   33 IRVKMPSREKLVSPSNFGGGSAAKDDGGVFSGSLEGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLSIRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVEITFRTCDDFKKWQESNRVAVSENFSAQFMTRLNDALPETAGRTKSMKNTVPSVNKCFEAFLYDRFVRQQLDGYV 324
            +RVKMPS+EKLV  SN GGG++  D GG FSG+LEGLSS RDLHS Q RV LVVWTKEED  L KLVKANSE++WAQIAADL GALL SHQ  +AEGQ SGR D F TRTGRQCF+RWTTHLAAGVRKHPW E+ED KLRQAVRNA KKVSTDGFWREVA+TIASRTA ECQHRWLSIRQVPWTDRERE +FHAQ+HLGS WNDISKYFVDRTPNEVE TF TCDDFKKWQESNRV VSENFSAQFM RLND LPETAG TKSMK+ VPS N C +A LYDRFVRQQ DG V
Sbjct:  210 VRVKMPSKEKLVPSSNSGGGTSTMDHGGAFSGNLEGLSSTRDLHSSQTRVILVVWTKEEDAILAKLVKANSEKNWAQIAADLSGALLTSHQQREAEGQSSGRTDVFATRTGRQCFERWTTHLAAGVRKHPWMESEDHKLRQAVRNAPKKVSTDGFWREVAETIASRTARECQHRWLSIRQVPWTDREREIIFHAQKHLGSCWNDISKYFVDRTPNEVETTFCTCDDFKKWQESNRVVVSENFSAQFMNRLNDPLPETAGSTKSMKSIVPSANNCLDAVLYDRFVRQQHDGDV 501

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: D7FN70_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN70_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 5.380e-73
Identity = 135/246 (54.88%), Postives = 162/246 (65.85%), Query Frame = 0

Query:    1 MEASSLSNRNVSVNLVRNRSSKGKQNQRALVGIRVKMPSREKLVSPSNFGGGSAAKDDGGVFSGSLEGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVR--NASKKVSTDGFWREVAKTIASRTAWECQHRWLSIRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDR 244
            ME SSLSN+N S+                        PS+E  V PS+ GGG++AKDDG +FSGSLEGLSS RD  S Q+RV LVVWTKEED  LT LV  N E SW Q AADL GALL+S Q  +AEGQ SGR   FT +TGRQC +RWTTHL A V+K+PWT++EDE LRQAVR  +A+K+VS    WR VAKT+A RT WECQHRW SI+ V WT+RE E+L  AQ     R +   ++  +R
Sbjct:  236 METSSLSNKNRSI------------------------PSKETFVPPSDSGGGTSAKDDGAMFSGSLEGLSSTRDSLSSQKRVVLVVWTKEEDARLTHLVITNGEGSWDQKAADLSGALLESRQRREAEGQASGRPGVFTPKTGRQCSERWTTHLVARVQKNPWTKSEDETLRQAVRISSANKEVSAYEVWRVVAKTVAFRTGWECQHRWRSIQDVAWTNREWESLSQAQGKRADRSSSPDRFKKER 457

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814CGT4_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814CGT4_9BILA)

HSP 1 Score: 89.4 bits (220), Expect = 5.380e-16
Identity = 61/225 (27.11%), Postives = 90/225 (40.00%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVEITFRTCDDFKKWQESNRVAVSENFSAQFMTRLNDALPETAGRTKSMKNTVPSVNKC 306
            WT EED  L +  +   E  W Q+A  +GG                        RT  QC  RW   L   + K PWT  ED K+R+ V     +      W  +AK +  R   +C+ RW +     I + PWTD+E   ++   +HLG++W +I++Y + R+ N ++           W  S R    + F  Q    +   L  TA      K  VP    C
Sbjct:   47 WTNEEDQKLREGRERFGENEWNQVAKHVGGH-----------------------RTDSQCQHRWERVLNPSIVKGPWTNEEDNKVRELVEKYGARQ-----WSLIAKHLTGRVGKQCRERWHNHLNPNINKAPWTDKENLLIYVLHKHLGNKWAEIARYLIGRSDNAIK---------NHWNSSMR----KKFQLQEENLIRQGLDWTAMLPNDFKCPVPLQTSC 230

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814NF05_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814NF05_ADIRI)

HSP 1 Score: 86.7 bits (213), Expect = 3.660e-15
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 0

Query:   67 EGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            E L +IR + S +++ +   WTKEED  L + + ++     W+ I+  +G                         RT  QC  RW   L   + K PWT+ ED+K+ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +HLG++W +I+K+F  R+ N ++
Sbjct:   22 ENLPNIRKIPSSRKK-SYKKWTKEEDDRLREFINSHDGYNDWSSISNYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNEENLRLFILHQHLGNKWAEIAKHFNGRSDNSIK 182

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A820DYE5_9BILA (Hypothetical protein (Fragment) n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A820DYE5_9BILA)

HSP 1 Score: 84.7 bits (208), Expect = 1.620e-14
Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            WTKEED  L   + +N+  + W++I+  +G                         RT  QC  RW   L   + K PWT+ ED K+ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +H G+RW +I+KYF  R+ N ++
Sbjct:   32 WTKEEDERLKDFINSNNGLTDWSRISQYVGNG-----------------------RTDAQCQHRWDRFLDPSITKGPWTDEEDRKVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENFLLFILHQHFGNRWAEIAKYFNGRSDNSIK 173

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A819WXZ1_9BILA (Hypothetical protein n=6 Tax=Rotaria sordida TaxID=392033 RepID=A0A819WXZ1_9BILA)

HSP 1 Score: 83.6 bits (205), Expect = 3.150e-14
Identity = 50/170 (29.41%), Postives = 78/170 (45.88%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            WTKEED  L + + ++   + W+ I+  +G                         RT  QC  RW   L   + K PWT+ ED K+ + VR+   K      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +H G++W +I+KYF  R+ N ++
Sbjct:   37 WTKEEDDRLREFILSHDGLKDWSSISKYVG-----------------------NDRTDAQCQHRWERFLDPSITKGPWTDEEDRKVIELVRDYGAK-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNDENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 178

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A821NDH8_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821NDH8_9BILA)

HSP 1 Score: 83.6 bits (205), Expect = 4.040e-14
Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            WTKEED  L + + ++   + W+ I+  +G                         RT  QC  RW   L   + K PWT+ ED+K+ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +H G++W +I+KYF  R+ N ++
Sbjct:   45 WTKEEDDRLREFILSHDGLKDWSNISKYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNEENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 186

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A817ING3_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817ING3_9BILA)

HSP 1 Score: 82.0 bits (201), Expect = 4.310e-14
Identity = 49/170 (28.82%), Postives = 78/170 (45.88%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKAN-SERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            WTK+ED  L   + ++ S + W+ I+  +G                         RT  QC  RW   L   + K PWT+ ED+K+ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT  E   LF   +H G++W +I+KYF  R+ N ++
Sbjct:   41 WTKDEDDRLRDFILSHDSLKDWSSISKYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDDEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTSEENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 182

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A813MFE2_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A813MFE2_9BILA)

HSP 1 Score: 83.6 bits (205), Expect = 5.250e-14
Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 0

Query:   87 WTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            WTKEED  L   + +N+  + W++I+  +G                         RT  QC  RW   L   + K PWT+ ED K+ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +H G+RW +I+KYF  R+ N ++
Sbjct:   40 WTKEEDERLKDFIISNNGLTDWSRISQYVGNG-----------------------RTDAQCQHRWDRFLDPSITKGPWTDEEDRKVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENFLLFILHQHFGNRWAEIAKYFNGRSDNSIK 181

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BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814H4T5_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814H4T5_ADIRI)

HSP 1 Score: 83.2 bits (204), Expect = 5.750e-14
Identity = 51/180 (28.33%), Postives = 81/180 (45.00%), Query Frame = 0

Query:   77 SGQQRVALVVWTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 250
            S  ++ +   WTKEED  L   +  N   + W++I+  +G                         RT  QC  RW   L   + K PWT+ ED ++ + VR+   +      W  +AK +  R   +C+ RW +     I + PWT+ E   LF   +H G+RW +I+KYF  R+ N ++
Sbjct:   31 SSSRKKSYKKWTKEEDERLKDFINCNGGLTDWSRISQYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDRRVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENLLLFVLHQHFGNRWAEIAKYFNGRSDNSIK 182

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTL6_ECTSI	1.900e-166	80.82	Myb protein n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D7FN70_ECTSI	5.380e-73	54.88	Myb-like DNA-binding domain containing protein n=1...	[more]
A0A814CGT4_9BILA	5.380e-16	27.11	Hypothetical protein n=1 Tax=Didymodactylos carnos...	[more]
A0A814NF05_ADIRI	3.660e-15	28.42	Hypothetical protein n=2 Tax=Adineta ricciae TaxID...	[more]
A0A820DYE5_9BILA	1.620e-14	30.00	Hypothetical protein (Fragment) n=2 Tax=Adineta st...	[more]
A0A819WXZ1_9BILA	3.150e-14	29.41	Hypothetical protein n=6 Tax=Rotaria sordida TaxID...	[more]
A0A821NDH8_9BILA	4.040e-14	28.82	Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 ...	[more]
A0A817ING3_9BILA	4.310e-14	28.82	Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ...	[more]
A0A813MFE2_9BILA	5.250e-14	30.00	Hypothetical protein n=1 Tax=Adineta steineri TaxI...	[more]
A0A814H4T5_ADIRI	5.750e-14	28.33	Hypothetical protein n=2 Tax=Adineta ricciae TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 83..156 e-value: 7.9E-8 score: 42.0 coord: 214..259 e-value: 1.5 score: 16.9 coord: 159..213 e-value: 1.1E-6 score: 38.2
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 214..249 e-value: 4.2E-6 score: 26.9
None	No IPR available	GENE3D	1.10.10.60		coord: 214..279 e-value: 5.5E-7 score: 31.5
None	No IPR available	GENE3D	1.10.10.60		coord: 158..213 e-value: 2.0E-11 score: 45.6
None	No IPR available	GENE3D	1.10.10.60		coord: 86..157 e-value: 5.8E-13 score: 50.6
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 87..171 e-value: 3.5E-13 score: 49.6
None	No IPR available	PANTHER	PTHR46621	FAMILY NOT NAMED	coord: 135..248 coord: 86..247
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 155..211 score: 9.535
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 79..158 score: 9.261
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 86..159
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 157..250

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5959	contig	Ecto-sp13_S_contig5959:4173..7789 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5959.16517.1	mRNA_Ecto-sp13_S_contig5959.16517.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5959 4170..7789 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5959.16517.1 ID=prot_Ecto-sp13_S_contig5959.16517.1|Name=mRNA_Ecto-sp13_S_contig5959.16517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp
MEASSLSNRNVSVNLVRNRSSKGKQNQRALVGIRVKMPSREKLVSPSNFG
GGSAAKDDGGVFSGSLEGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVK
ANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRW
TTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTA
WECQHRWLSIRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE
ITFRTCDDFKKWQESNRVAVSENFSAQFMTRLNDALPETAGRTKSMKNTV
PSVNKCFEAFLYDRFVRQQLDGYV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf