mRNA_Ecto-sp13_S_contig5959.16517.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: D7FTL6_ECTSI (Myb protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL6_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 1.980e-166 Identity = 236/292 (80.82%), Postives = 251/292 (85.96%), Query Frame = 1
Query: 100 IRVKMPSREKLVSPSNFGGGSAAKDDGGVFSGSLEGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLSIRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVEITFRTCDDFKKWQESNRVAVSENFSAQFMTRLNDALPETAGRTKSMKNTVPSVNKCFEAFLYDRFVRQQLDGYV 975
+RVKMPS+EKLV SN GGG++ D GG FSG+LEGLSS RDLHS Q RV LVVWTKEED L KLVKANSE++WAQIAADL GALL SHQ +AEGQ SGR D F TRTGRQCF+RWTTHLAAGVRKHPW E+ED KLRQAVRNA KKVSTDGFWREVA+TIASRTA ECQHRWLSIRQVPWTDRERE +FHAQ+HLGS WNDISKYFVDRTPNEVE TF TCDDFKKWQESNRV VSENFSAQFM RLND LPETAG TKSMK+ VPS N C +A LYDRFVRQQ DG V
Sbjct: 210 VRVKMPSKEKLVPSSNSGGGTSTMDHGGAFSGNLEGLSSTRDLHSSQTRVILVVWTKEEDAILAKLVKANSEKNWAQIAADLSGALLTSHQQREAEGQSSGRTDVFATRTGRQCFERWTTHLAAGVRKHPWMESEDHKLRQAVRNAPKKVSTDGFWREVAETIASRTARECQHRWLSIRQVPWTDREREIIFHAQKHLGSCWNDISKYFVDRTPNEVETTFCTCDDFKKWQESNRVVVSENFSAQFMNRLNDPLPETAGSTKSMKSIVPSANNCLDAVLYDRFVRQQHDGDV 501
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: D7FN70_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN70_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.410e-73 Identity = 136/247 (55.06%), Postives = 163/247 (65.99%), Query Frame = 1
Query: 1 RMEASSLSNRNVSVNLVRNRSSKGKQNQRALVGIRVKMPSREKLVSPSNFGGGSAAKDDGGVFSGSLEGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVR--NASKKVSTDGFWREVAKTIASRTAWECQHRWLSIRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDR 735
RME SSLSN+N S+ PS+E V PS+ GGG++AKDDG +FSGSLEGLSS RD S Q+RV LVVWTKEED LT LV N E SW Q AADL GALL+S Q +AEGQ SGR FT +TGRQC +RWTTHL A V+K+PWT++EDE LRQAVR +A+K+VS WR VAKT+A RT WECQHRW SI+ V WT+RE E+L AQ R + ++ +R
Sbjct: 235 RMETSSLSNKNRSI------------------------PSKETFVPPSDSGGGTSAKDDGAMFSGSLEGLSSTRDSLSSQKRVVLVVWTKEEDARLTHLVITNGEGSWDQKAADLSGALLESRQRREAEGQASGRPGVFTPKTGRQCSERWTTHLVARVQKNPWTKSEDETLRQAVRISSANKEVSAYEVWRVVAKTVAFRTGWECQHRWRSIQDVAWTNREWESLSQAQGKRADRSSSPDRFKKER 457
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814CGT4_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814CGT4_9BILA) HSP 1 Score: 89.4 bits (220), Expect = 5.470e-16 Identity = 61/225 (27.11%), Postives = 90/225 (40.00%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKANSERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVEITFRTCDDFKKWQESNRVAVSENFSAQFMTRLNDALPETAGRTKSMKNTVPSVNKC 921
WT EED L + + E W Q+A +GG RT QC RW L + K PWT ED K+R+ V + W +AK + R +C+ RW + I + PWTD+E ++ +HLG++W +I++Y + R+ N ++ W S R + F Q + L TA K VP C
Sbjct: 47 WTNEEDQKLREGRERFGENEWNQVAKHVGGH-----------------------RTDSQCQHRWERVLNPSIVKGPWTNEEDNKVRELVEKYGARQ-----WSLIAKHLTGRVGKQCRERWHNHLNPNINKAPWTDKENLLIYVLHKHLGNKWAEIARYLIGRSDNAIK---------NHWNSSMR----KKFQLQEENLIRQGLDWTAMLPNDFKCPVPLQTSC 230
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814NF05_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814NF05_ADIRI) HSP 1 Score: 86.7 bits (213), Expect = 3.720e-15 Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 1
Query: 202 EGLSSIRDLHSGQQRVALVVWTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
E L +IR + S +++ + WTKEED L + + ++ W+ I+ +G RT QC RW L + K PWT+ ED+K+ + VR+ + W +AK + R +C+ RW + I + PWT+ E LF +HLG++W +I+K+F R+ N ++
Sbjct: 22 ENLPNIRKIPSSRKK-SYKKWTKEEDDRLREFINSHDGYNDWSSISNYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNEENLRLFILHQHLGNKWAEIAKHFNGRSDNSIK 182
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A820DYE5_9BILA (Hypothetical protein (Fragment) n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A820DYE5_9BILA) HSP 1 Score: 84.7 bits (208), Expect = 1.650e-14 Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
WTKEED L + +N+ + W++I+ +G RT QC RW L + K PWT+ ED K+ + VR+ + W +AK + R +C+ RW + I + PWT+ E LF +H G+RW +I+KYF R+ N ++
Sbjct: 32 WTKEEDERLKDFINSNNGLTDWSRISQYVGNG-----------------------RTDAQCQHRWDRFLDPSITKGPWTDEEDRKVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENFLLFILHQHFGNRWAEIAKYFNGRSDNSIK 173
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A819WXZ1_9BILA (Hypothetical protein n=6 Tax=Rotaria sordida TaxID=392033 RepID=A0A819WXZ1_9BILA) HSP 1 Score: 83.6 bits (205), Expect = 3.190e-14 Identity = 50/170 (29.41%), Postives = 78/170 (45.88%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
WTKEED L + + ++ + W+ I+ +G RT QC RW L + K PWT+ ED K+ + VR+ K W +AK + R +C+ RW + I + PWT+ E LF +H G++W +I+KYF R+ N ++
Sbjct: 37 WTKEEDDRLREFILSHDGLKDWSSISKYVG-----------------------NDRTDAQCQHRWERFLDPSITKGPWTDEEDRKVIELVRDYGAK-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNDENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 178
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A821NDH8_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821NDH8_9BILA) HSP 1 Score: 83.6 bits (205), Expect = 4.100e-14 Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKANSE-RSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
WTKEED L + + ++ + W+ I+ +G RT QC RW L + K PWT+ ED+K+ + VR+ + W +AK + R +C+ RW + I + PWT+ E LF +H G++W +I+KYF R+ N ++
Sbjct: 45 WTKEEDDRLREFILSHDGLKDWSNISKYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTNEENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 186
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A817ING3_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817ING3_9BILA) HSP 1 Score: 82.0 bits (201), Expect = 4.370e-14 Identity = 49/170 (28.82%), Postives = 78/170 (45.88%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKAN-SERSWAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
WTK+ED L + ++ S + W+ I+ +G RT QC RW L + K PWT+ ED+K+ + VR+ + W +AK + R +C+ RW + I + PWT E LF +H G++W +I+KYF R+ N ++
Sbjct: 41 WTKDEDDRLRDFILSHDSLKDWSSISKYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDDEDKKVIELVRDYGAR-----HWSLIAKELKGRVGKQCRERWHNHLNPLINKNPWTSEENLRLFILHQHFGNKWAEIAKYFNGRSDNSIK 182
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A813MFE2_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A813MFE2_9BILA) HSP 1 Score: 83.6 bits (205), Expect = 5.340e-14 Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 262 WTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
WTKEED L + +N+ + W++I+ +G RT QC RW L + K PWT+ ED K+ + VR+ + W +AK + R +C+ RW + I + PWT+ E LF +H G+RW +I+KYF R+ N ++
Sbjct: 40 WTKEEDERLKDFIISNNGLTDWSRISQYVGNG-----------------------RTDAQCQHRWDRFLDPSITKGPWTDEEDRKVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENFLLFILHQHFGNRWAEIAKYFNGRSDNSIK 181
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Match: A0A814H4T5_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814H4T5_ADIRI) HSP 1 Score: 83.2 bits (204), Expect = 5.830e-14 Identity = 51/180 (28.33%), Postives = 81/180 (45.00%), Query Frame = 1
Query: 232 SGQQRVALVVWTKEEDVTLTKLVKANSERS-WAQIAADLGGALLKSHQPGKAEGQPSGRADFFTTRTGRQCFDRWTTHLAAGVRKHPWTEAEDEKLRQAVRNASKKVSTDGFWREVAKTIASRTAWECQHRWLS-----IRQVPWTDRERETLFHAQRHLGSRWNDISKYFVDRTPNEVE 753
S ++ + WTKEED L + N + W++I+ +G RT QC RW L + K PWT+ ED ++ + VR+ + W +AK + R +C+ RW + I + PWT+ E LF +H G+RW +I+KYF R+ N ++
Sbjct: 31 SSSRKKSYKKWTKEEDERLKDFINCNGGLTDWSRISQYVGNG-----------------------RTDAQCQHRWERFLDPSITKGPWTDEEDRRVIELVRDYGARQ-----WSLIAKELKGRVGKQCRERWHNHLNPAINKNPWTNDENLLLFVLHQHFGNRWAEIAKYFNGRSDNSIK 182 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5959.16517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5959.16517.1 >prot_Ecto-sp13_S_contig5959.16517.1 ID=prot_Ecto-sp13_S_contig5959.16517.1|Name=mRNA_Ecto-sp13_S_contig5959.16517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp MEASSLSNRNVSVNLVRNRSSKGKQNQRALVGIRVKMPSREKLVSPSNFGback to top mRNA from alignment at Ecto-sp13_S_contig5959:4170..7789+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5959.16517.1 ID=mRNA_Ecto-sp13_S_contig5959.16517.1|Name=mRNA_Ecto-sp13_S_contig5959.16517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3620bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5959:4170..7789+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5959:4170..7789+ >mRNA_Ecto-sp13_S_contig5959.16517.1 ID=mRNA_Ecto-sp13_S_contig5959.16517.1|Name=mRNA_Ecto-sp13_S_contig5959.16517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5959:4170..7789+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |