mRNA_Ecto-sp13_S_contig5956.16512.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A6H5JX01_9PHAE (DUF155 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX01_9PHAE) HSP 1 Score: 578 bits (1489), Expect = 1.190e-200 Identity = 301/314 (95.86%), Postives = 304/314 (96.82%), Query Frame = 1
Query: 1 MDSLYIDVIHSTTDLRGGLRKARELERPAWEADEYADEEDGYRDGYDQEQXXXXGTGXXXXXXXXEDGGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRLVGGSDR 942
MDSLYIDVIHSTTDLRGGLRKARELERPAWE DEYAD E+GY DGYDQEQ GTG XXXXX EDGGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFM+GKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVII+YLIFVEVAIELVWNVIIKDVLRLVGGSDR
Sbjct: 264 MDSLYIDVIHSTTDLRGGLRKARELERPAWETDEYADGEEGYGDGYDQEQEEVDGTGVGXXXXX-EDGGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMMGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIVYLIFVEVAIELVWNVIIKDVLRLVGGSDR 576
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: D8LTX9_ECTSI (DUF155 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX9_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.270e-114 Identity = 193/204 (94.61%), Postives = 193/204 (94.61%), Query Frame = 1
Query: 1 MDSLYIDVIHSTTDLRGGLRKARELERPAWEADEYADEEDGYRDGYDQEQXXXXGTGXXXXXXXX--EDGGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIG 606
MDSLYIDVIHSTTDLRGGLRKARELERPAWEADE AD EDGY DGYDQ XXXX XXXXXXXX ED GDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIG
Sbjct: 112 MDSLYIDVIHSTTDLRGGLRKARELERPAWEADESADGEDGYGDGYDQXXXXXXXXXXXXXXXXXXXEDEGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIG 315
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A835ZB52_9STRA (DUF155 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB52_9STRA) HSP 1 Score: 265 bits (676), Expect = 6.570e-80 Identity = 155/317 (48.90%), Postives = 195/317 (61.51%), Query Frame = 1
Query: 4 DSLYIDVIHSTTDLRGGLRKARELERPAWEADEYADEEDGYRD-----GYDQEQXXXXGTGXXXXXXXXEDGGDDAVTRH--KDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGG-KRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRLVG 930
D LY DVIHSTTD L + + E DE A++ D D+E+ AV H KD+ PYG ++FWG + AEE ++LS + +F VG VSE+EL QS DDMTF + G K +K DE+ L T EKL+YS +LAQSAKLFVFEERL NIIE T YP+ L TGKI LT++Q+ +L+GRVL E+NEVNLHSD+LD PE+FWE WEP Y+ LC YLD+PLR+ +NKRL +LRELLDVL Q TN HA RLEV++ ELVWNV ++D++ LVG
Sbjct: 155 DVLYSDVIHSTTDKL--LTEEPAEDYATKEGDENAEDSQAETDRESKYARDREREHERSQHSLL-----------AVPSHIGKDMFILPYGCIIFWGFTPAEELKLLSEIRKFAVGPVSESELEQSQDDMTFCFVDAGDDKESRVIKADELVLSTDSALEKLSYSFALAQSAKLFVFEERLGNIIEQTRVYPEELKLTGKIQLTQMQMNKLIGRVLVERNEVNLHSDVLDKPEFFWETQTWEPEYQRLCTYLDMPLRLVVINKRLDVLRELLDVLHNQVTNTHAIRLEVVV----------ELVWNVGVRDIMHLVG 448
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A4D9D3S6_9STRA (DUF155 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3S6_9STRA) HSP 1 Score: 227 bits (578), Expect = 3.130e-64 Identity = 122/232 (52.59%), Postives = 157/232 (67.67%), Query Frame = 1
Query: 229 KDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRL 924
K I FPYG VFWGC++ EE+ +S LT F V VS+ E +S+DD + Y + + EITL + DP EKLA S SLAQSAKLFVFE+R+D I +T P LA GK ++ +I +L G+V E+NE+NLHSDILDTPE+FWE D WEP Y LC YLD+P RV+ LNKRL ILRELL+VL TQ N+H+T+LE+I+I LI VEV ++ V + + D+L L
Sbjct: 339 KHIFCFPYGCTVFWGCTKEEEERFISMLTPFAVELVSDMEREESYDDFAYFYGS-----SPQILHYEITLTSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKTNVSRKEISKLTGKVFLERNEINLHSDILDTPEWFWEADLWEPRYVGLCKYLDLPNRVNILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQ-VLEIALNDLLHL 564
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A7S2S7I6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7I6_9STRA) HSP 1 Score: 208 bits (530), Expect = 6.020e-60 Identity = 110/234 (47.01%), Postives = 151/234 (64.53%), Query Frame = 1
Query: 223 RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTR-FMVGKVSETELAQSFDDMTFVYRHRGGKRG--------VPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWN 897
RHKDI+FFP+G VVFWGC EE VLS L+ F +E EL +S D M F Y G + D++ L + P EKLA S +LAQSAKLFVFE RLD I + + P+ LA +G + LT ++ R++G++ + +VNLHSDILD PE+ WE + WEP++ LC+YLDI RV+ LNKRL ++RELLDVL TQ + +++RLE I+I LI +E+ E++W+
Sbjct: 73 RHKDIIFFPFGCVVFWGCDHEEELGVLSFLSSAFSESLSTEAELQESHDTMAFTYNSNSAGPGNFAATTPRTRVLGDKVHLVSWHPLEKLAVSFALAQSAKLFVFEARLDVTINSVKRIPEELAESGSVSLTRNELSRMMGKLFIARTQVNLHSDILDEPEFLWEYEDWEPSFHKLCSYLDIDHRVELLNKRLDLIRELLDVLDTQLESKNSSRLEWIVIILIIIEILFEVLWD 306
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A3F2RCQ5_9STRA (DUF155 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RCQ5_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.410e-59 Identity = 111/239 (46.44%), Postives = 158/239 (66.11%), Query Frame = 1
Query: 223 RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRLVGGSD 939
+ KD +F G VFWG + AEE+ L L F VG V + E+ +DM ++Y G + + ND ITL + +EKLA S ++AQS+KL VFEER+++ I T PQ LAATG I ++ I +L+GR+ E+++VNL+SD+LD P++FWE+D +EP Y+ + YL + RV LN RL ILRELLDVLS Q + H T+LE+I+I+LI EVA+++VWN++IKD+L SD
Sbjct: 14 QQKDAFYFATGCAVFWGLTRAEEQAHLMALGTFSVGPVKQVEV----EDMDYMY----GDASI-ICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEDTIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDILGFFPHSD 243
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A2D4BKL3_PYTIN (DUF155 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKL3_PYTIN) HSP 1 Score: 210 bits (535), Expect = 6.750e-59 Identity = 117/248 (47.18%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 208 DDAVT----RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRLVGGSD 939
DDA+ R KD+ +F G VFWG + AEE+ L L F VG V + E+ +DM + Y + ND ITL + +EKLA S ++AQSAKL VFEER++ I+ T PQ LA TG I ++ I +L+GR+ E+N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EVA++LVWN++IKD+L SD
Sbjct: 233 DDALVPLAYRQKDVFYFGTGCTVFWGLTRAEEQAHLRALAAFSVGPVKQVEV----EDMDYTYGDVSR-----IVNDAITLSSNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVAILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQLVWNILIKDILGFFPNSD 471
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: F0WJI1_9STRA (Uncharacterized protein AlNc14C122G6706 n=3 Tax=Albugo TaxID=65356 RepID=F0WJI1_9STRA) HSP 1 Score: 207 bits (528), Expect = 6.600e-58 Identity = 111/232 (47.84%), Postives = 153/232 (65.95%), Query Frame = 1
Query: 223 RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVL 918
KD+ +F G VFWG S AEE+E L L F +G V + E+ +DM +VY + ND ITL + +EKLA S ++AQSAKL VFEER++ I+ T PQ LA TG I ++ I +L+GR+ E+N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EV +++VWN++IKD+L
Sbjct: 243 EQKDVFYFATGCTVFWGLSRAEEQEHLRALISFSMGPVKQVEV----EDMDYVYGDSNR-----IVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVVVQIVWNILIKDIL 465
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: A0A8K1CNT9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNT9_PYTOL) HSP 1 Score: 206 bits (525), Expect = 1.080e-57 Identity = 113/241 (46.89%), Postives = 157/241 (65.15%), Query Frame = 1
Query: 205 GDDAVT---RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVL 918
G+D V R KD+ +F G VFWG + AEE+ L L F VG V + E+ +DM + Y + ND ITL++ +EKLA S ++AQSAKL VFEER++ I+ T PQ LA TG I ++ I +L+GR+ +N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EVA+++VWN++IKD+L
Sbjct: 207 GEDIVPLAYRQKDVFYFGTGCTVFWGLTRAEEQAHLRALMAFSVGPVKQVEV----EDMDYTYGESSR-----IFNDAITLESNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIVRNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQIVWNILIKDIL 438
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Match: K3WZW5_GLOUD (DUF155 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZW5_GLOUD) HSP 1 Score: 205 bits (522), Expect = 1.730e-57 Identity = 111/239 (46.44%), Postives = 154/239 (64.44%), Query Frame = 1
Query: 223 RHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIIYLIFVEVAIELVWNVIIKDVLRLVGGSD 939
R KD+ +F G VFWG + EE+ L L +F VG V + E+ +DM + Y + ND ITL + +EKLA S ++AQSAKL VFEER++ I+ T PQ LA TG I ++ I +L+GR+ E+++VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EV +++VWN+IIKD+L SD
Sbjct: 195 RQKDVFYFATGCTVFWGLTRMEEQAHLRALLQFSVGPVKQIEV----EDMDYTYGD-----ATSIVNDAITLSSNLASEKLAISFAMAQSAKLDVFEERVEETIQQTKHIPQNLATTGSIQYSQGDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKMMRYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVVVQIVWNIIIKDILGFFPRSD 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5956.16512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5956.16512.1 >prot_Ecto-sp13_S_contig5956.16512.1 ID=prot_Ecto-sp13_S_contig5956.16512.1|Name=mRNA_Ecto-sp13_S_contig5956.16512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MDSLYIDVIHSTTDLRGGLRKARELERPAWEADEYADEEDGYRDGYDQEQback to top mRNA from alignment at Ecto-sp13_S_contig5956:839..5768- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5956.16512.1 ID=mRNA_Ecto-sp13_S_contig5956.16512.1|Name=mRNA_Ecto-sp13_S_contig5956.16512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4930bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5956:839..5768- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5956:839..5768- >mRNA_Ecto-sp13_S_contig5956.16512.1 ID=mRNA_Ecto-sp13_S_contig5956.16512.1|Name=mRNA_Ecto-sp13_S_contig5956.16512.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5956:839..5768- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |