prot_Ecto-sp13_S_contig5951.16505.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5951.16505.1
Unique Nameprot_Ecto-sp13_S_contig5951.16505.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length629
Homology
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A6H5KPF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF1_9PHAE)

HSP 1 Score: 1069 bits (2765), Expect = 0.000e+0
Identity = 561/633 (88.63%), Postives = 572/633 (90.36%), Query Frame = 0
Query:    1 MKRGQEILVGVGDSSFCQIPCPWASWSRQTADEKSKSHLGSSNDDVGSFQTKISQIACGATICLAAVNXXXXXXXXXXXX--AIDLAPLACLLEWGTGLYGERLSTEASVPQQGDDRKPASFLNHPAQVAFSSFPLGLRSSPPAVRYIVCGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSASGTPLDEGGLANTSSGAAGAATG----VKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALGPSPFVAGSPRRPQQDTTASAAGDSATVNDSGASPASGKRKLATISSAPAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTLATSSKGRAFVWGQVAPPLQHYGGRGGGKQKGEDGSSVRGTGTGDGKGPPLRPFSVPREMNPAELLQDAAPPNSQMDEGGEGRCCCEVGSPKGVRAGAADKEDPRWKVSTVGCGPWFVVFGLQEEERQ 627
            MKRGQEILVGVGDSSFCQIPCPWASWSRQTADEK KSH  SSNDDV   QTKISQIACGAT CLAAVNXXXXXXXXXXXX  AID AP A LLEWGTGLYGERLSTE SVPQQGD+R   SFLNHPA VAFSS PLGLRSSPPA+RYI CGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQC +GSTPAA PLSYPSSS PDWVAEPLGLGGSKVADLAAGDDHVIAVGTDG AWAWGRGDCGQLGYGSP DG D DGG SACVPMAV LPS ASGTPLDEGGLA+TSSGAAGA       VKSGHG+Q+PRK PGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTG+E VACGAWHTAALSTTGDVYTWGWARFGALGPSP VAG  RRPQQDTTAS  GDSAT+NDSGASPASGKRKL T SS PAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTLATSSKGRAFVWGQVAPPLQ YGGRGGG+QKG DGSSVRG  TGD KGPPL PFSVPREM PA+LLQDAAP NSQ DE  EGRC CEVGSP+GVRAGA DK D RWKVSTVGCGPWFVVFGLQEEERQ
Sbjct:    1 MKRGQEILVGVGDSSFCQIPCPWASWSRQTADEKGKSHGSSSNDDVCRVQTKISQIACGATTCLAAVNXXXXXXXXXXXXXXAIDPAPPAYLLEWGTGLYGERLSTETSVPQQGDERNQESFLNHPAPVAFSSLPLGLRSSPPAIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCHDGSTPAARPLSYPSSSNPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGCAWAWGRGDCGQLGYGSP-DGVDYDGGGSACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAXXXXXXXVKSGHGLQDPRKRPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGMETVACGAWHTAALSTTGDVYTWGWARFGALGPSPLVAGFHRRPQQDTTASVIGDSATINDSGASPASGKRKLETTSSTPAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTLATSSKGRAFVWGQVAPPLQQYGGRGGGEQKGGDGSSVRGIDTGDRKGPPLGPFSVPREMKPADLLQDAAPSNSQTDERREGRCYCEVGSPRGVRAGAVDKGDSRWKVSTVGCGPWFVVFGLQEEERQ 632          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: D8LN13_ECTSI (Regulator of chromosome condensation-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN13_ECTSI)

HSP 1 Score: 1036 bits (2680), Expect = 0.000e+0
Identity = 542/632 (85.76%), Postives = 555/632 (87.82%), Query Frame = 0
Query:    1 MKRGQEILVGVGDSSFCQIPCPWASWSRQTADEKSKSHLGSSNDDVGSFQTKISQIACGATICLAAVNXXXXXXXXXXXXAIDLAPLACLLEWGTGLYGERLSTEASVPQQGDDRKPASFLNHPAQVAFSSFPLGLRSSPPAVRYIVCGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSASGTPLDEGGLANTSSGAAGAATGVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALGPSPFVAGSPRRPQQDTTASAAGDSATVNDSGASPASGKRKLATISSAPAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTLATSSKGRAFVWGQVAPPLQHYGGRGGGKQKGEDGSSVRGTGTGDGK----GPPLRPFSVPREMNPAELLQDAAPPNSQMDEGGEGRCCCEVGSPKGVRAGAADKEDPRWKVSTVGCGPWFVVFGLQEEERQG 628
            MKRGQEILVGVGDSSFCQIPCPWASWSRQTAD  SKSH  S N+DV   QTKISQIACGAT CLAAVNXXXXXXXX    AID A  + LLEWGTGLYGERLSTE SVPQQGD+R  ASFLNHPAQVA SS PLGLRSSPP +RYI CGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGG SACVPMAV LPS ASGTPLDEGGLA+TSSGAAGAATGVKSGHGV       GALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTG+EAVACGAWHTAALSTTGDVYTWGWARFGALGPSPFV GSP RPQQDTTASA GDSAT+NDSGASPASGKRKL +  S PA EEGEVRPYPGLVD MDDILADDDDQLVSVSCGARYT+ATS+KGRAFVWGQVAPPLQHYGGRGG                        G  L PFS PREM PAELLQDAAPPNSQMDEGGEGRCCCEVGS KG+RAGA D+ D RW+VS VGCGPWFVVFGLQEEERQG
Sbjct:    1 MKRGQEILVGVGDSSFCQIPCPWASWSRQTADANSKSHP-SRNEDVRRVQTKISQIACGATTCLAAVNXXXXXXXXS---AIDHARPSFLLEWGTGLYGERLSTETSVPQQGDERNHASFLNHPAQVALSSLPLGLRSSPPVIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGGSACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAATGVKSGHGVH------GALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGMEAVACGAWHTAALSTTGDVYTWGWARFGALGPSPFVTGSPLRPQQDTTASATGDSATINDSGASPASGKRKLKSARSTPAEEEGEVRPYPGLVDEMDDILADDDDQLVSVSCGARYTVATSTKGRAFVWGQVAPPLQHYGGRGGXXXXXXXXXXXXXXXXXXXXXXXXGRRLGPFSAPREMKPAELLQDAAPPNSQMDEGGEGRCCCEVGSAKGLRAGADDEGDSRWRVSAVGCGPWFVVFGLQEEERQG 622          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A7S2WVU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVU6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.560e-21
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 0
Query:  312 RKCPGALVIRA---ACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            R C  AL  +A   A G  HSA++ + GR++TFGSG   QLG G   +    P +V+ L+GVG + P+G+ TGI  V+CG WHTAA++T GD+YTWGW RFG LG
Sbjct:    9 RPCTVALGAQAWSVAAGPVHSAVVDSKGRLYTFGSGGRYQLGHGQAVDEPE-PRLVETLLGVGRLLPNGTSTGIRQVSCGTWHTAAITTDGDLYTWGWGRFGQLG 112          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: W4GMU7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMU7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.860e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0
Query:  323 ACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            A G  HSA+I+ DG ++TFG GL+ QLG GT     + PT V +L GVG ++ +  FTG+  VACGAWHTAAL+TTGDVYTWGW + G LG
Sbjct:  165 AAGAHHSAVISCDGHLYTFGWGLYHQLGHGTTNNVFT-PTRVRSLEGVGQLQRN-HFTGLARVACGAWHTAALTTTGDVYTWGWGQHGQLG 253          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A2C9V2R9_MANES (Uncharacterized protein n=8 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9V2R9_MANES)

HSP 1 Score: 101 bits (252), Expect = 4.110e-19
Identity = 74/202 (36.63%), Postives = 97/202 (48.02%), Query Frame = 0
Query:  216 GSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSASGTP----LDEGGLANTSSGAAGAATGVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            G ++A +AAG  H +A+   G  W WG G  GQLG GS               P  VH  +S+ G      L  GG+A+              GHG     + PG+ +   ACG  HSA+IT+ G + TFG GL+GQ G G+  +  S P  V AL+G+           IE VA G WHT  +S  GDVY +G  +FG LG
Sbjct:  222 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVR--------MVSSPHPVHCINSSYGKDITGALSRGGMAS-------------EGHGY----RVPGSYIKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PICVSALLGIR----------IEGVAAGLWHTVCISADGDVYAFGGNQFGQLG 387          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: W4GLY5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLY5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.650e-19
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  323 ACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGAL 412
            A G  HSA+I+ DG ++TFG GL+ QLG GT     + PT V +L GVG ++ +  FTG+  VACGAWHTAAL+TTGDVYTWGW + G L
Sbjct:  165 AAGAHHSAVISCDGHLYTFGWGLYHQLGHGTTNNVFT-PTRVRSLEGVGQLQRN-HFTGLARVACGAWHTAALTTTGDVYTWGWGQHGQL 252          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A6P4MW89_GOSAR (ultraviolet-B receptor UVR8-like n=33 Tax=Malvaceae TaxID=3629 RepID=A0A6P4MW89_GOSAR)

HSP 1 Score: 99.8 bits (247), Expect = 1.840e-18
Identity = 73/201 (36.32%), Postives = 99/201 (49.25%), Query Frame = 0
Query:  216 GSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSAS---GTPLDEGGLANTSSGAAGAATGVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            G ++A +AAG  H +A+  +G  W WG G  GQLG GS           S+  P+    PSS      + L  G L++                  +   + PG+ V   ACG  HSA+IT+ G + TFG GL+GQ G G+  +  S PT V AL+G+           IE+VA G WHT  +ST GDVY +G  +FG LG
Sbjct:  229 GVRIATVAAGGRHTLALSDNGQVWGWGYGGEGQLGLGSRIRMV------SSPHPIPCIEPSSLGKDRASALSRGSLSSE-----------------RQSFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PTCVSALLGIR----------IESVAAGLWHTVCVSTDGDVYAFGGNQFGQLG 395          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A0B0PG70_GOSAR (RCC1 domain-containing 1 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A0B0PG70_GOSAR)

HSP 1 Score: 99.0 bits (245), Expect = 1.930e-18
Identity = 73/201 (36.32%), Postives = 98/201 (48.76%), Query Frame = 0
Query:  216 GSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSAS---GTPLDEGGLANTSSGAAGAATGVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            G ++A +AAG  H +A+   G  W WG G  GQLG GS           S+  P+    PSS      + L  G L++                  +   + PG+ V   ACG  HSA+IT+ G + TFG GL+GQ G G+  +  S PT V AL+G+           IE+VA G WHT  +ST GDVY +G  +FG LG
Sbjct:  163 GVRIATVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRIRMV------SSPHPIPCIEPSSLGKDRASALSRGSLSSE-----------------RQSFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PTCVSALLGIR----------IESVAAGLWHTVCVSTDGDVYAFGGNQFGQLG 329          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A834WAP7_9FABA (Ultraviolet-B receptor UVR8 isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WAP7_9FABA)

HSP 1 Score: 99.0 bits (245), Expect = 3.660e-18
Identity = 74/199 (37.19%), Postives = 96/199 (48.24%), Query Frame = 0
Query:  216 GSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSAS-GTPLDEGGLANTSSGAAGAATGVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            G ++A +AAG  H +A+   G  W WG G  GQLG GS          S   +P     P      T L  GG+++                  QN R  PG+ V   ACG  HSA+IT+ G + TFG GL+GQ G G+  +  S PT V +L+G+           IE VA G WHT  +ST GDVY +G  +FG LG
Sbjct:  246 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----SPHLIPCIDSSPYGKDRSTALARGGMSSEG----------------QNFR-VPGSYVKEIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PTCVSSLLGIQ----------IEGVAAGLWHTVCISTHGDVYAFGGNQFGQLG 412          
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Match: A0A0L9UW84_PHAAN (Uncharacterized protein n=6 Tax=Vigna TaxID=3913 RepID=A0A0L9UW84_PHAAN)

HSP 1 Score: 99.0 bits (245), Expect = 3.720e-18
Identity = 72/199 (36.18%), Postives = 99/199 (49.75%), Query Frame = 0
Query:  216 GSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGSSACVPMAVHLPSSASGTPLDEGGLANTSSGAAGAATGVKSGHGVQNPR-KCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLGLGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGDVYTWGWARFGALG 413
            G ++A +AAG  H +A+   G  WAWG G  GQLG GS                  + + SS    P     + ++  G   +AT V+   G +    + PG+ + R ACG  HSA+IT+ G + TFG GL+GQ G G+  +  S PT V +L+G+           IE VA G WHT   S  GDVY +G  +FG LG
Sbjct:  250 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGS-----------------RIRMVSSPHLVPC----IDSSYYGKDRSATLVRGSMGSEGQSFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PTCVSSLLGIH----------IEGVAAGLWHTVCTSADGDVYAFGGNQFGQLG 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5951.16505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPF1_9PHAE0.000e+088.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN13_ECTSI0.000e+085.76Regulator of chromosome condensation-like protein ... [more]
A0A7S2WVU6_9STRA1.560e-2150.48Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W4GMU7_9STRA2.860e-1957.14Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A2C9V2R9_MANES4.110e-1936.63Uncharacterized protein n=8 Tax=Crotonoideae TaxID... [more]
W4GLY5_9STRA4.650e-1956.67Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6P4MW89_GOSAR1.840e-1836.32ultraviolet-B receptor UVR8-like n=33 Tax=Malvacea... [more]
A0A0B0PG70_GOSAR1.930e-1836.32RCC1 domain-containing 1 n=1 Tax=Gossypium arboreu... [more]
A0A834WAP7_9FABA3.660e-1837.19Ultraviolet-B receptor UVR8 isoform X1 n=1 Tax=Sen... [more]
A0A0L9UW84_PHAAN3.720e-1836.18Uncharacterized protein n=6 Tax=Vigna TaxID=3913 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 237..253
score: 42.16
coord: 385..401
score: 43.14
coord: 401..415
score: 41.11
coord: 495..513
score: 30.7
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 335..395
e-value: 4.7E-11
score: 43.1
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 385..395
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 336..398
score: 14.403
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 160..235
score: 9.499
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 236..335
score: 10.645
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 90..281
e-value: 8.7E-17
score: 62.7
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 283..532
e-value: 1.5E-32
score: 114.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 50..416
NoneNo IPR availablePFAMPF13540RCC1_2coord: 219..248
e-value: 2.2E-5
score: 24.1
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 25..414
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 316..513
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 316..513
coord: 25..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5951contigEcto-sp13_S_contig5951:6237..8655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5951.16505.1mRNA_Ecto-sp13_S_contig5951.16505.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5951 6237..8655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5951.16505.1 ID=prot_Ecto-sp13_S_contig5951.16505.1|Name=mRNA_Ecto-sp13_S_contig5951.16505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=629bp
MKRGQEILVGVGDSSFCQIPCPWASWSRQTADEKSKSHLGSSNDDVGSFQ
TKISQIACGATICLAAVNNNNNNNNNSSSSAIDLAPLACLLEWGTGLYGE
RLSTEASVPQQGDDRKPASFLNHPAQVAFSSFPLGLRSSPPAVRYIVCGA
HFVVASLENGGCISWGGGREGRRALGRGSCGTCGQCRNGSTPAAPPLSYP
SSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLG
YGSPPDGADCDGGSSACVPMAVHLPSSASGTPLDEGGLANTSSGAAGAAT
GVKSGHGVQNPRKCPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQLG
LGTVGETSSIPTVVDALIGVGTMRPDGSFTGIEAVACGAWHTAALSTTGD
VYTWGWARFGALGPSPFVAGSPRRPQQDTTASAAGDSATVNDSGASPASG
KRKLATISSAPAAEEGEVRPYPGLVDGMDDILADDDDQLVSVSCGARYTL
ATSSKGRAFVWGQVAPPLQHYGGRGGGKQKGEDGSSVRGTGTGDGKGPPL
RPFSVPREMNPAELLQDAAPPNSQMDEGGEGRCCCEVGSPKGVRAGAADK
EDPRWKVSTVGCGPWFVVFGLQEEERQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II