mRNA_Ecto-sp13_S_contig595.16501.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 1.680e-184 Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 2
Query: 209 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
MVDISRH+DFLGPCGKTLSVSERSGLQVSMMQR+REERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXX RPPERFLEMHRLA IVKTID AVAVVPKGALLVEASRKIRP+RNFEGLSVEAAKDLR+YFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCS+LRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct: 1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK------FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE) HSP 1 Score: 353 bits (905), Expect = 1.940e-119 Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 2
Query: 494 MPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
MP+VKPEYEVLAAAVTGRLRGDPSLPLDEEPE XXXXXX RPPERFLEMHRLA IVKTID AVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLR+YFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPS SCS+LRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct: 1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA) HSP 1 Score: 311 bits (797), Expect = 9.700e-102 Identity = 161/291 (55.33%), Postives = 206/291 (70.79%), Query Frame = 2
Query: 209 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTG--RLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
MVDI +H++FLGP G +LS ER+GLQVSM+QR++EE L + FWGK+ +E DYL+CY+L P LEEG FP+++ +Y+ S+DT LR MP + E + LAAAV R +GDPSLPLD EPE PERF E+HRLA+ V ID VAV PKGA+L+EASR++ P+R FEGLS EAA ++RNYFH R PE+ A AALT+KGLV DADFLDP+A D+P G W+L+ + + + + LRSLAWPGYFFF + +G++GG YFG GLPNTDL FML
Sbjct: 1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQ------YYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAA---PERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.050e-85 Identity = 142/277 (51.26%), Postives = 181/277 (65.34%), Query Frame = 2
Query: 251 GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLD--EEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
G TLS+ E+SGL ++++QR +EE K+ FWGK+ G E DYLV YAL + D P KK FY+C D +LR +P + EY +A ++ GR +GDPS+PLD EE E ERF E+HRL + V+ ID VAVVP+GA L+EAS KI +RN+EGLS EAA DLRNYFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+L+ + S + LRS WPGYFFFH+ T +YGG YFGDGL N DL FML
Sbjct: 14 GCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKK------FYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK-------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA) HSP 1 Score: 232 bits (592), Expect = 8.380e-71 Identity = 130/288 (45.14%), Postives = 182/288 (63.19%), Query Frame = 2
Query: 239 LGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDT-SLRLMPAVKPEYEVLAAAVTGRL---RGDPSL-----PLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
LGP G TLS+ ER+ LQ++M+ +R+E L G++ FWGK+ G NDYL+ YA+ PT FP+KK FY+C +S+ SL MP++ E+E LA T R+ RGDPS D++ E + E F E HRL + V+TID +V+P+GA +V+A+ +R +++FEGLS +AA L NY+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W+L + S + +LRS WPGYFF+H ET +YGG YFGDG+ N D+ FML
Sbjct: 9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKK------FYYCTASNGYSLVQMPSLTEEWEGLAK--TWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNKEVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN) HSP 1 Score: 214 bits (544), Expect = 1.120e-63 Identity = 123/288 (42.71%), Postives = 169/288 (58.68%), Query Frame = 2
Query: 230 LDFLGPCGKTLSVSERSGLQVSMMQREREERLE-GKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGR-LRGDPSLPLDEEP----EXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
++FL P G LS+SER+GL ++M+Q + E L G + FWG+++G +DYLV AL TP+ FP KK +Y + + MP + EY AA + + G+PS+P P E PE F E H+LA+ V ID VVP+GA LV+A+ ++ + +EGL+ EAA LR+YFHFR P+S A AL K G+VR DFLDPIA D P G ++L +PS + +I+RS WPG +F+H+ TG+YG Y GDGLPNTD+QFML
Sbjct: 1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKF-----YYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO) HSP 1 Score: 201 bits (511), Expect = 1.080e-58 Identity = 126/291 (43.30%), Postives = 173/291 (59.45%), Query Frame = 2
Query: 224 RHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPL--DEEPEXXXXXXXXXXXXXLRPPER-----FLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
RHLD L G TLSV ER+GL+ M +R+ EE L + FWG++ E DYLV Y P+ E +P K+ FYFC + L+ P + E+ +TG LRGDP L + D+E XXXXXXXXXXXX P R F+E HRLA V +D +++VP+GA ++ + + P+ +F GLS A +Y HFR P + E + L ++G +RD DFLDP++ D+P G W++ ++ +++RSL WPGYFF H T +GGAYFG+GLPN DL FML
Sbjct: 4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQ------FYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC) HSP 1 Score: 196 bits (497), Expect = 7.970e-57 Identity = 117/284 (41.20%), Postives = 163/284 (57.39%), Query Frame = 2
Query: 227 HLDFLGPC-GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
H+D L C G TL+ ERS L++ ++R+ E + G M WGK+ G DY+VC A +E D P KK FYFC ++ L+ P V E AAA TGRL+GDPS P+DE + + F E+ RL IV+ ID A ++VP GA +V A+ + +R F+GL+ + A+ L +Y+H+R +S E +AL++ GLVR ADFLDPI++D G W + + + + +LR L +PG FFH+ TG YG AY GDGL N DL FML
Sbjct: 5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKK------FYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK----------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A485LRP6_9STRA (Aste57867_23175 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRP6_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.300e-56 Identity = 117/287 (40.77%), Postives = 160/287 (55.75%), Query Frame = 2
Query: 227 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
HLD + G T++ ERS L+V ++R E ++ M FWG++ G DY +C A +E D P KK F+FC ++ L+ P V + AA TGRL+GDPS +DE EP+ + F E+ RL IV+ ID+ +VVP GA +V A+ +I P+R F+GL E A L +Y HFR + E +A+ GLVR ADFLDP+ D G WTL +P+ S +LR+L +PG+ FFH+ TG +G AYFGDGL N DL FML
Sbjct: 5 HLDIVSRSIGHTVTSQERSNLEVGFIKRNATENIDS-MRFWGRIFGEAQDYTICVAF----VEGVDAPKKK------FFFCTNTSPDLQQFPEVGKDKRDKAARFTGRLKGDPSRLMDENETEPQEG------------ETKDVFREVDRLVLIVEAIDYQASVVPCGAYVVSATHQIVPNRLFQGLPWEKALQLGSYHHFREATTAERKSAIATPGLVRPADFLDPLTVDLD-GTWTLRKDPTGSAVVLRNLVFPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 267
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A6G0X1U3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1U3_9STRA) HSP 1 Score: 194 bits (492), Expect = 7.530e-56 Identity = 117/296 (39.53%), Postives = 166/296 (56.08%), Query Frame = 2
Query: 200 SSKMVDISRHLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
S+K +++ HLD + G TL+ ERS L++ ++R E ++ M FWG++ G DY++C AL ++ D P KK F+FC ++ L+ P V + V A TGRL+GDPS +DE EP+ + F E+ RL +V+ ID +VVP GA +V A+ + P+R F+GL+ E A L +Y HFR + E +A+ GLVR ADFLDPI D G WTL + + S +LR+L +PG+ FFH+ TG +G AYFGDGL N DL FML
Sbjct: 14 SAKPMELE-HLDIVSRSIGSTLTCQERSNLEIGFIKRNATENIDS-MRFWGRIAGEAQDYIICVAL----VDGVDAPKKK------FFFCTNTSPELQQFPEVGKDKRVKATRYTGRLKGDPSRLMDESETEPQEGENK------------DVFREVDRLVLLVEAIDTNTSVVPCGAYVVSATHTVIPNRLFQGLTWEKAMQLGSYHHFREATTAERKSAIATPGLVRPADFLDPITVDLE-GTWTLRKDGTGSVVLLRNLVYPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig595.16501.1 >prot_Ecto-sp13_S_contig595.16501.1 ID=prot_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEback to top mRNA from alignment at Ecto-sp13_S_contig595:17006..22925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig595.16501.1 ID=mRNA_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5920bp|location=Sequence derived from alignment at Ecto-sp13_S_contig595:17006..22925+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig595:17006..22925+ >mRNA_Ecto-sp13_S_contig595.16501.1 ID=mRNA_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig595:17006..22925+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |