mRNA_Ecto-sp13_S_contig595.16501.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig595.16501.1
Unique NamemRNA_Ecto-sp13_S_contig595.16501.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 1.680e-184
Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 2
Query:  209 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            MVDISRH+DFLGPCGKTLSVSERSGLQVSMMQR+REERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK      FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXX RPPERFLEMHRLA IVKTID AVAVVPKGALLVEASRKIRP+RNFEGLSVEAAKDLR+YFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCS+LRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct:    1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK------FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 1.940e-119
Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 2
Query:  494 MPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            MP+VKPEYEVLAAAVTGRLRGDPSLPLDEEPE       XXXXXX RPPERFLEMHRLA IVKTID AVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLR+YFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPS SCS+LRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct:    1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA)

HSP 1 Score: 311 bits (797), Expect = 9.700e-102
Identity = 161/291 (55.33%), Postives = 206/291 (70.79%), Query Frame = 2
Query:  209 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTG--RLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            MVDI +H++FLGP G +LS  ER+GLQVSM+QR++EE L   + FWGK+  +E DYL+CY+L  P LEEG FP+++      +Y+  S+DT LR MP +  E + LAAAV    R +GDPSLPLD EPE                PERF E+HRLA+ V  ID  VAV PKGA+L+EASR++ P+R FEGLS EAA ++RNYFH R PE+  A AALT+KGLV DADFLDP+A D+P G W+L+ + + + + LRSLAWPGYFFF +  +G++GG YFG GLPNTDL FML
Sbjct:    1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQ------YYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAA---PERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.050e-85
Identity = 142/277 (51.26%), Postives = 181/277 (65.34%), Query Frame = 2
Query:  251 GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLD--EEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            G TLS+ E+SGL ++++QR +EE    K+ FWGK+ G E DYLV YAL    +   D P KK      FY+C   D +LR +P +  EY  +A ++ GR +GDPS+PLD  EE E                 ERF E+HRL + V+ ID  VAVVP+GA L+EAS KI  +RN+EGLS EAA DLRNYFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+L+ + S +   LRS  WPGYFFFH+  T +YGG YFGDGL N DL FML
Sbjct:   14 GCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKK------FYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK-------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA)

HSP 1 Score: 232 bits (592), Expect = 8.380e-71
Identity = 130/288 (45.14%), Postives = 182/288 (63.19%), Query Frame = 2
Query:  239 LGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDT-SLRLMPAVKPEYEVLAAAVTGRL---RGDPSL-----PLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            LGP G TLS+ ER+ LQ++M+  +R+E L G++ FWGK+ G  NDYL+ YA+  PT     FP+KK      FY+C +S+  SL  MP++  E+E LA   T R+   RGDPS        D++ E             +   E F E HRL + V+TID   +V+P+GA +V+A+  +R +++FEGLS +AA  L NY+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W+L  + S +  +LRS  WPGYFF+H  ET +YGG YFGDG+ N D+ FML
Sbjct:    9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKK------FYYCTASNGYSLVQMPSLTEEWEGLAK--TWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNKEVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN)

HSP 1 Score: 214 bits (544), Expect = 1.120e-63
Identity = 123/288 (42.71%), Postives = 169/288 (58.68%), Query Frame = 2
Query:  230 LDFLGPCGKTLSVSERSGLQVSMMQREREERLE-GKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGR-LRGDPSLPLDEEP----EXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            ++FL P G  LS+SER+GL ++M+Q  + E L  G + FWG+++G  +DYLV  AL TP+     FP KK      +Y   +    +  MP +  EY   AA +  +   G+PS+P    P    E                PE F E H+LA+ V  ID    VVP+GA LV+A+ ++  +  +EGL+ EAA  LR+YFHFR P+S  A  AL K G+VR  DFLDPIA D P G ++L  +PS + +I+RS  WPG +F+H+  TG+YG  Y GDGLPNTD+QFML
Sbjct:    1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKF-----YYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO)

HSP 1 Score: 201 bits (511), Expect = 1.080e-58
Identity = 126/291 (43.30%), Postives = 173/291 (59.45%), Query Frame = 2
Query:  224 RHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPL--DEEPEXXXXXXXXXXXXXLRPPER-----FLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            RHLD L   G TLSV ER+GL+  M +R+ EE L   + FWG++   E DYLV Y    P+ E   +P K+      FYFC +    L+  P +  E+      +TG LRGDP L +  D+E  XXXXXXXXXXXX    P R     F+E HRLA  V  +D  +++VP+GA ++  +  + P+ +F GLS   A    +Y HFR P + E  + L ++G +RD DFLDP++ D+P G W++ ++     +++RSL WPGYFF H   T  +GGAYFG+GLPN DL FML
Sbjct:    4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQ------FYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC)

HSP 1 Score: 196 bits (497), Expect = 7.970e-57
Identity = 117/284 (41.20%), Postives = 163/284 (57.39%), Query Frame = 2
Query:  227 HLDFLGPC-GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            H+D L  C G TL+  ERS L++  ++R+  E + G M  WGK+ G   DY+VC A     +E  D P KK      FYFC ++   L+  P V  E    AAA TGRL+GDPS P+DE  +                 + F E+ RL  IV+ ID A ++VP GA +V A+  +  +R F+GL+ + A+ L +Y+H+R  +S E  +AL++ GLVR ADFLDPI++D   G W +  + + +  +LR L +PG  FFH+  TG YG AY GDGL N DL FML
Sbjct:    5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKK------FYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK----------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A485LRP6_9STRA (Aste57867_23175 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRP6_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.300e-56
Identity = 117/287 (40.77%), Postives = 160/287 (55.75%), Query Frame = 2
Query:  227 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            HLD +    G T++  ERS L+V  ++R   E ++  M FWG++ G   DY +C A     +E  D P KK      F+FC ++   L+  P V  +    AA  TGRL+GDPS  +DE   EP+                 + F E+ RL  IV+ ID+  +VVP GA +V A+ +I P+R F+GL  E A  L +Y HFR   + E  +A+   GLVR ADFLDP+  D   G WTL  +P+ S  +LR+L +PG+ FFH+  TG +G AYFGDGL N DL FML
Sbjct:    5 HLDIVSRSIGHTVTSQERSNLEVGFIKRNATENIDS-MRFWGRIFGEAQDYTICVAF----VEGVDAPKKK------FFFCTNTSPDLQQFPEVGKDKRDKAARFTGRLKGDPSRLMDENETEPQEG------------ETKDVFREVDRLVLIVEAIDYQASVVPCGAYVVSATHQIVPNRLFQGLPWEKALQLGSYHHFREATTAERKSAIATPGLVRPADFLDPLTVDLD-GTWTLRKDPTGSAVVLRNLVFPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 267          
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Match: A0A6G0X1U3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1U3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 7.530e-56
Identity = 117/296 (39.53%), Postives = 166/296 (56.08%), Query Frame = 2
Query:  200 SSKMVDISRHLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXLRPPERFLEMHRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 1075
            S+K +++  HLD +    G TL+  ERS L++  ++R   E ++  M FWG++ G   DY++C AL    ++  D P KK      F+FC ++   L+  P V  +  V A   TGRL+GDPS  +DE   EP+                 + F E+ RL  +V+ ID   +VVP GA +V A+  + P+R F+GL+ E A  L +Y HFR   + E  +A+   GLVR ADFLDPI  D   G WTL  + + S  +LR+L +PG+ FFH+  TG +G AYFGDGL N DL FML
Sbjct:   14 SAKPMELE-HLDIVSRSIGSTLTCQERSNLEIGFIKRNATENIDS-MRFWGRIAGEAQDYIICVAL----VDGVDAPKKK------FFFCTNTSPELQQFPEVGKDKRVKATRYTGRLKGDPSRLMDESETEPQEGENK------------DVFREVDRLVLLVEAIDTNTSVVPCGAYVVSATHTVIPNRLFQGLTWEKAMQLGSYHHFREATTAERKSAIATPGLVRPADFLDPITVDLE-GTWTLRKDGTGSVVLLRNLVYPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig595.16501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G3_ECTSI1.680e-18495.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZL4_9PHAE1.940e-11992.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YS21_9STRA9.700e-10255.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1U7_9STRA1.050e-8551.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H666_9STRA8.380e-7145.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YNP7_AURAN1.120e-6342.71Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5A8CDT7_CAFRO1.080e-5843.30Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A067CFY2_SAPPC7.970e-5741.20Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LRP6_9STRA2.300e-5640.77Aste57867_23175 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0X1U3_9STRA7.530e-5639.53Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig595contigEcto-sp13_S_contig595:17006..22925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score526.9
Seed ortholog evalue5.8e-147
Seed eggNOG ortholog2880.D7G1G3
Preferred nameRSPH9
Model size1149
KEGG koko:K19757
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032421,GO:0032838,GO:0035082,GO:0040011,GO:0042995,GO:0043005,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060091,GO:0060271,GO:0060285,GO:0060294,GO:0070925,GO:0071840,GO:0097014,GO:0097458,GO:0097729,GO:0097730,GO:0097732,GO:0098862,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons8
EggNOG free text desc.cilium movement involved in cell motility
EggNOG OGs2C9RZ@1,2QR99@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_000910.1
Cds size870
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig595.16501.1prot_Ecto-sp13_S_contig595.16501.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig595 18492..22854 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463826.6148472-UTR-Ecto-sp13_S_contig595:17005..170601681463826.6148472-UTR-Ecto-sp13_S_contig595:17005..17060Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig595 17006..17060 +
1681463826.6376004-UTR-Ecto-sp13_S_contig595:18338..184911681463826.6376004-UTR-Ecto-sp13_S_contig595:18338..18491Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig595 18339..18491 +
1681463826.7465758-UTR-Ecto-sp13_S_contig595:22854..229251681463826.7465758-UTR-Ecto-sp13_S_contig595:22854..22925Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig595 22855..22925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463826.6476204-CDS-Ecto-sp13_S_contig595:18491..185721681463826.6476204-CDS-Ecto-sp13_S_contig595:18491..18572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 18492..18572 +
1681463826.6578481-CDS-Ecto-sp13_S_contig595:19678..198431681463826.6578481-CDS-Ecto-sp13_S_contig595:19678..19843Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 19679..19843 +
1681463826.6679535-CDS-Ecto-sp13_S_contig595:20040..202111681463826.6679535-CDS-Ecto-sp13_S_contig595:20040..20211Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 20041..20211 +
1681463826.6817703-CDS-Ecto-sp13_S_contig595:21209..213171681463826.6817703-CDS-Ecto-sp13_S_contig595:21209..21317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 21210..21317 +
1681463826.699543-CDS-Ecto-sp13_S_contig595:21584..216891681463826.699543-CDS-Ecto-sp13_S_contig595:21584..21689Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 21585..21689 +
1681463826.712238-CDS-Ecto-sp13_S_contig595:21889..220541681463826.712238-CDS-Ecto-sp13_S_contig595:21889..22054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 21890..22054 +
1681463826.7343245-CDS-Ecto-sp13_S_contig595:22779..228541681463826.7343245-CDS-Ecto-sp13_S_contig595:22779..22854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig595 22780..22854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig595.16501.1

>prot_Ecto-sp13_S_contig595.16501.1 ID=prot_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp
MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVE
GNENDYLVCYALATPTLEEGDFPLKKARTPCSFYFCVSSDTSLRLMPAVK
PEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPPAGEDEEEELRPPERFLEM
HRLAFIVKTIDWAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRNY
FHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCS
ILRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML*
back to top

mRNA from alignment at Ecto-sp13_S_contig595:17006..22925+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig595.16501.1 ID=mRNA_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5920bp|location=Sequence derived from alignment at Ecto-sp13_S_contig595:17006..22925+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCGCGCCAAGATTGCCTACCCTCGTGAACAGCACTCAAGAAACAACGCT CGCAGGTGGGTGACGTGTGTACTTAGGTGAAGGATGAGGTGTCATGAAAG CTAGTTGGCAAAGTGCAAACTTGGTTAGGAGTACGGTCGGTGGCGAGGAA CGACGACCGGTTGAACCGCAAAATATCCGTACACCGATGGAGTCGGTACG TAACACGAATGCCAAATGGGTGATCTCTTTGTTAATACTTGAGATATCAT ACAACATAGATATGCAAATAATTCATAAGTGTTCCTCTTTCGTGTTACAG CAGAAGCTTCGATGAGATTGCGGTATTGTTGTTACATTGTTTACGTACAC CCGCACATGGAAGTTTTGCCCCCCGATGCTTGTAGGCGCACCATCAGACA TACTGATGCTGGTGGTACATGTGGTCTACAACCTTGGTACTTCGGGAGCA GGGAAAACTGCGGGCAAGGGTGTCGTATCAACACTATTGTTGTAAAGCCA GAGGTGGAGCCAAGAAAAATCGGGACGCTTGTTTTCAAACGAAAACGCAG CTCGCGCCCCTCCCAGGGAAAATGCTCTCTGGAAATAGATTCCCCCAAAC CGTATTACACATAGAAATAGGACCCAGTGGGCCTGGTTCGGGTTCGAACG TGGCAGTTGTTTGGTCTTTCATATCACTGGGCTGACTTAAAAATTAGTCA TCTTGACGCGAACATGGGCGGTCGGTCGGGACTACAAAGTACGGTTGCAT ATATTTCTGTTGACGTTGCTGATTCGTCGACCGCCAATGGCCCTCATCTT TGCCTCGTGTCCCTACGCCAACCCACAAAGCTGACCGTATGTTCTACTGT ACGTGCTGAAGCTACTGCATTTCCAAAACTCGCTCTTTCACCGTGGCGTA GATTCACTTGTCAACTCCAGCACGCGTGTACATCTTCATTGCAGAGTCGC CGCGAAAACCTGTACTTTTGAGGCAATGGACTTCCAGGAAATACTTGTCA GATACGACATGCTTCAAATACTGTGCTTCGAAAATGTCAGATGTAGCATT TCACCTGTGCAACGACAGGGCTGTGCACCGAGCGTAGACGAGGTCTTTTT TTTACTCACCACGTACAAAAATAATAGCCAGAGATCGACACAATAGTTAG GGTAGACAAGCTATATGATACTGTACATCCAATATTTTAAGTCGTCATCG AAATATCAGAACCAGCAACAGCTGCAAAAAACCCATGAAACTCATATTGC GCGGGACACGACGCACTCACTCCCAAGGACCCCCCACCACTGAACGTCTC AGTGTCCTACCGATCAAAACTTTATTGCACAAGGAACAATATCTGCACGC TGCTAAGCCCCGCCGGAAAGATAGTGGCGAGCGACACCGCAAGGGAGAGT GAAGCGGGCCCTGTATACGCTCTCTTCTGCGGAAGACCTGAGGGGTGCAC CACGCCAACTCGCTCGCGTTGAGTGACAGCAGCAAAATGGTGGACATTTC TCGGCACTTAGACTTCCTCGGACCTTGTGGAAAGACACTCAGCGTCTCCG AGAGGTCAGGGTTGCAGGTGAGAAGCTGATGTAGCCACGGGCTGCCGGTA TCCCGAGCGAAAAGCCGCCGGGAGTTACGTATGGAGGTCGCACCGAAACA CTCGATCGAAACGTGGTAGAAAACTAGCAGGTTCTTGAGTCGAACAACCT GGATTCTTATGTCGAATGACCCGGGTCTAGAGCCATCAGATATCATTGCA ATACATACACCTTCAATCGCATCGCACGGCTCCAACGTGTTCGGCTGCTC AAATTTCATGCACCGTTTGGTGCCCGTGCGATGGACAGTTTTGAAGCGAT CTTGGTCGTGGGATACTCGTCATGTGAGCTGCTGTTGCGGTATTTTCGGC CTGTCGCTGATACTCGACATATTGAAGCAGAACAAATCCATACCTTCTCG ATGTCGACGTGTGCATACAAAACGTCCTCCGGCATTGCCCCCGATTGAGA AGAGAGGGGACAGTACCATTCAACGATTTAAGTGAATACGAGCCTCCCAA CCTAGCAACCATACTGTTTTTCACTACAGAGCTGTTCTGAGGGATCGCAA GTTTCTGGGCGAAAAAAAGAAAAGAACCTTGACCATGAGATGGGGGAGGA CGGGGGTACTCATAGTCGTGAACGCCGTAGTCGTTAGCCCATTGACCTCA CGTCCCTACAAAGCCGGGACGGAGCACGCCGGGTTTTTAAGGGACCAGGC TCTCACATCACCAAGCGCGAAGCACCGTGAGGTATTCGCCGAGTCGCATG AAGGGTGCGCTGCATCCTGCGAAGGGTGTTCGGTATCTTGGGCTTACTTC TTTACGCACGGATGACAGCTGCGTATTACGTGAATTATTTTCTAGTGCTT TCACTTCCAGAGACAGTTATACACACTGTGTAACTGCCTCGAGGGTGCTT GACCAGTTTTACGAAACATGATCATCCCCTTTGCACGCAGCAAGGGTTCT CGACCCCGCACAACACAATAACTCAACCACGATTATGAGGAGGGGGAGGG GGACTTTCAGCGAGACTGACCTCCGCTCCAACAGAATAGTGACGGGGTCA ACAAAGAGGGCAGTGGGAAGAGTATATGGCACGAAAAAAAGAGACGCTAA CGAAAAATATTGCTGTCGGGCAGGTGTCAATGATGCAGCGGGAGCGGGAG GAGCGTCTGGAAGGGAAGATGGTCTTCTGGGGCAAGGTTGAAGGCAACGA GAACGACTACCTCGTTTGCTATGCATTGGCGACACCAACTCTAGAAGAAG GCGACTTCCCCCTCAAGAAGGCGAGAACACCTTGCTCTGTGCGTGTCGAT CACATTCTTGCTGCCGCTGCGACTGCTACTGCTGCCTGCTGTGGTTACTG CTGCGTTTTCATGTACCAGGCTCTCCAGAAAACTATTCCCACATCGAACT CACCAAAATCTGATGCCTCGAACATGTTCCCGTACGTTTGCAAGAATAAA TGCCACCCCGGCCCACCCACCCCCACCTGCCTCAGTTCTACTTCTGCGTG AGCAGCGACACGTCCCTGCGCCTGATGCCGGCCGTGAAGCCCGAGTACGA GGTCCTGGCGGCGGCTGTGACGGGGAGGCTAAGAGGGGACCCTTCACTTC CTCTCGACGAGGAGCCGGAGGAGGAGGAGCCCCCCGCTGGGGAAGACGAA GAAGAGGTGTGATTTCTAGGTATACGAAGATAGCGCCCACACTGGGCAGT ATAGAACTCCGCGCTCAACACGACATCAAACATCATAACCTGGGTCCCAT TCCGGGCCCGGGCTCTTTCATGCGGATAGTGCCCGAGCTTGAGAACTTGG CAGAGAGTACCTTCGTGCTTAGAGCATAACACTAAGCAGAAGCGCTCGAG GACTTGGCAGCAAACGAACTTCGTTCTTGGCATTACATCAAGCAGTACAG CTTGAGAACTTGCCAGTCACCTAAGAGCTTCATGCTTGGCATTGCATCAA GCACTATAGCACTCGAGAGCTTGGCAGCTGAGAAGTTCGTGCTTAGCAAT ACATGAAACAGTAGCGATCGAGCATGTGGTAGTTGAGAACTTTGTGCTTA GCACTACATGAAACCTGTGCACTTTGTGTGAGCCCGGGATAGTTACAAAG CTAAACCTACATGGCGGCCGTTGGTAGCCTACAAGAGGAACCAATAACCC AAGTCTTGGCTAACACTAGAGGTCCGTAAGTACGGACGATATCTGTATTT TTTCTCTGCCTTCGATGCTGTGTTAGAAACAGATACTGCATACACGAAAG CCGTTGCTCGGTTTCGAGTTCATTCCCCGGGTTGTGGCCCAATGTATGTT CCTCGCGATAGTCACGTTTGTAGCGCCCACCGCGATTAATGGCGAGAACT CTGGGAGGCAAAAAAGGCCGTAGTTGTGTGGCTGGCGCTTCACCACAACC TACAACAACCGTCACAGACATCGTCCTTCTCGAAATTCGTCCAAACGGAA ACGAAACGAAACGAGGAGGAGTATCTACGTGGCCTCCTATCCCCCCCTCC CCCCCCCTGCGTCCTATGGTCCGTCCTTTCGGGGACGCGTGGTCAGAAGT CGAACTGCCAAGGCATGCCAAACGTGAGTATCCCCCTCTGCGTCCTTTTC TCCCTATGCATGTTTCGCCGATACGCCTACCACGATACCGCGTGATCCGC GAAGGAGCTCCGCCCCCCGGAGCGATTCTTGGAGATGCATCGCCTCGCTT TCATCGTGAAAACCATCGACTGGGCCGTAGCCGTGGTGCCGAAGGGGGCC CTCCTTGTTGAGGTATGATACACGGCACGAACCCACGCACCAGAAATTCG TATGTTTCGAGACGTGAGTCATTCTTGGGTTTCCCATGGAACACTTAAAG AGTGAGCGGGAAAAGAGGAGGTTTCTACTGCAGTACCCGCAATGGCTGCC GACGCCCGTACGATAGTAAACTGTGGTGCTGTTTATCCCGAATGATGCTG AAACACCGCAAAGAGGACTCTACCCGCGCCCTGAGGCCACCATGTTGCGC CTGTGCTTGGATGCTGTGGATTTATTCAGGCGTCCCGCAAGATTCGGCCT CACCGCAACTTCGAGGGCCTATCGGTAGAGGCGGCAAAAGATCTCAGAAA CTACTTCCACTTCAGGAATCCCGAGAGCATCGAGGTGGGAGCGGAACATA TAAATAAGCGATTTTACGGTGTGGAGTTCTCCCAACCATGCTTTCCCCGC CCGAATTCCTCCACCCAACCGAATCGGGAATCGGGATCCACCTCTTCTCT GTCAAATTCGCCTCTTCCCTTCCTGTCTCGCGGCGTGACTGAAAATGGCC CCGTACCTCCCTTCCATCCTCCTCTTCCCACCAGGCCATCGCGGCGCTCA CGAAGAAGGGCTTGGTGAGAGATGCCGACTTCCTCGACCCCATCGCCGCC GACAAGCCGCCGGGGTGCTGGACGCTTTCCATGAACCCCTCGGCCTCGTG CTCGATACTGCGCAGTCTAGCGTGGCCAGGATACTTTTTCTTTCACGAGG TGAGCGCCGAATATACCCCAATTGTAGGCAGCAGTCTGAGGCGGCCTGAT TTGGGCAAAGACACTGAAAAGTAGAACCATTCCATTGGATACCACAAAAG TCACTGTCGATAGACTTGCTGCCTCACAAAAAAGACGCCAGACGCGCCAC GCACTACAACTTCGGAGCAGAGCCAACATCAATCCATGTACAAGCGGCGG GGAGTTTAGATTTTCCGCCTGCTCCGACGAGCGAAATTGGCATTCAATTA TGCGTTGCCCGCAAGATTTATTCTGTTGGGGCAGGAGGTCTTTCGAGTGC GGAACAAGAAGGTTTCAACGAACCCGCCCGCCATATTGTATGACATGCAG GGGAGATGTCGCTGTTGACCAGGAAGCATGCACCCGGCAACGAGGAGGGG GAGCACGTTTTCTCCAAAATCTCTCTTTCGATTGTTTTTGTGTTCGTTCT AGCTGGTACTCGAAGTGAGCCGTGTGCCCTCCACTCGACTGTCGAATGCT ACTCTGCCTTTCAGGCAACGATTTACTGCGCTCGTCCAGCCAAACTGCGA TAGGATGCGAACAAACTGCGAAACCATGCGGACAACAAAACCGTTGTCCG TGCAACCCTTCGGTCAAGGCCTGGCGTACATTTCGTTGCGGACTGACGGC CTTGTACTCCGTCCACCTTAAACCACCCCCGTTCACAACATTTTGTCGTC TGTTTCCTCGACCGACGTGCGAAGGCGGAAACAGGGGACTACGGCGGGGC GTACTTTGGAGACGGGTTGCCGAACACAGACCTGCAATTCATGCTGTGAT CGATTGGTCGGATTTTGGTCCATGTACGAATGGAAGAGGAACGTGCTCGA CGCTAACATGAAGGGCCGCT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig595:17006..22925+

>mRNA_Ecto-sp13_S_contig595.16501.1 ID=mRNA_Ecto-sp13_S_contig595.16501.1|Name=mRNA_Ecto-sp13_S_contig595.16501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig595:17006..22925+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGACATTTCTCGGCACTTAGACTTCCTCGGACCTTGTGGAAAGAC
ACTCAGCGTCTCCGAGAGGTCAGGGTTGCAGGTGTCAATGATGCAGCGGG
AGCGGGAGGAGCGTCTGGAAGGGAAGATGGTCTTCTGGGGCAAGGTTGAA
GGCAACGAGAACGACTACCTCGTTTGCTATGCATTGGCGACACCAACTCT
AGAAGAAGGCGACTTCCCCCTCAAGAAGGCGAGAACACCTTGCTCTTTCT
ACTTCTGCGTGAGCAGCGACACGTCCCTGCGCCTGATGCCGGCCGTGAAG
CCCGAGTACGAGGTCCTGGCGGCGGCTGTGACGGGGAGGCTAAGAGGGGA
CCCTTCACTTCCTCTCGACGAGGAGCCGGAGGAGGAGGAGCCCCCCGCTG
GGGAAGACGAAGAAGAGGAGCTCCGCCCCCCGGAGCGATTCTTGGAGATG
CATCGCCTCGCTTTCATCGTGAAAACCATCGACTGGGCCGTAGCCGTGGT
GCCGAAGGGGGCCCTCCTTGTTGAGGCGTCCCGCAAGATTCGGCCTCACC
GCAACTTCGAGGGCCTATCGGTAGAGGCGGCAAAAGATCTCAGAAACTAC
TTCCACTTCAGGAATCCCGAGAGCATCGAGGCCATCGCGGCGCTCACGAA
GAAGGGCTTGGTGAGAGATGCCGACTTCCTCGACCCCATCGCCGCCGACA
AGCCGCCGGGGTGCTGGACGCTTTCCATGAACCCCTCGGCCTCGTGCTCG
ATACTGCGCAGTCTAGCGTGGCCAGGATACTTTTTCTTTCACGAGGCGGA
AACAGGGGACTACGGCGGGGCGTACTTTGGAGACGGGTTGCCGAACACAG
ACCTGCAATTCATGCTGTGA
back to top