prot_Ecto-sp13_S_contig59499.16499.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59499.16499.1
Unique Nameprot_Ecto-sp13_S_contig59499.16499.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length73
Homology
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: D8LI15_ECTSI (Folate/biopterin transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 6.200e-37
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNALM 69
            WGLTISELFWINALVPLVLV+PLMPFLLEDKKPRE GVLKRHSDELWTLVQK AVWRPMIFVYLYNALM
Sbjct:  290 WGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNALM 358          
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: A0A1Z5K9Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO)

HSP 1 Score: 58.5 bits (140), Expect = 2.750e-8
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRH----SDELWTLVQKNAVWRPMIFVYLYNAL 68
            W L I  +F+INA  PL+ +LP +P+LLE     ET  L ++      EL+   Q  AVW+PM FVY+YNAL
Sbjct:  377 WSLPIRLIFFINAAFPLIFLLPFVPYLLE----LETDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNAL 444          
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: A0A7S1FNC7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.760e-8
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    3 LTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNAL 68
            L IS +F+INA  P++ +LPL+PFL+E +   E         +L+   Q  AVW+PM FVY+YNA+
Sbjct:  463 LPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQCKDLFHTAQLKAVWQPMTFVYIYNAM 528          
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: A0A8K1FJ66_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ66_PYTOL)

HSP 1 Score: 55.8 bits (133), Expect = 2.430e-7
Identity = 25/67 (37.31%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYNA 67
            +GLT+SE+F + A++PLV V+P + +LLE+          +  ++LW ++Q+ A W+P+ F+ L+NA
Sbjct:  219 FGLTMSEVFLLLAVLPLVTVVPCI-YLLEEPHVTHVATWSQQREQLWLMLQRRATWQPLCFLALFNA 284          
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: A0A067CA45_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CA45_SAPPC)

HSP 1 Score: 52.4 bits (124), Expect = 4.080e-6
Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    1 WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYN 66
            W + ++  FWI A VP V+ +P++ F ++D K  E      + ++LWTLVQK AVW+ +IF +++N
Sbjct:  227 WDIGVNGYFWILA-VPAVINIPIVWFCIKDTKT-EAVQFSVYFNQLWTLVQKRAVWQVLIFNFVFN 290          
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Match: A0A067BNQ4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BNQ4_SAPPC)

HSP 1 Score: 51.6 bits (122), Expect = 7.620e-6
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLVQKNAVWRPMIFVYLYN 66
            W + ++  FWI A +P V+ +P++ F ++D K  E      + ++LWTLVQK AVW+ +IF + +N
Sbjct:  227 WDIGVNGYFWILA-IPSVINIPVVWFFIKDTK-HEAVQFSVYFNQLWTLVQKRAVWQVLIFNFFFN 290          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59499.16499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LI15_ECTSI6.200e-3795.65Folate/biopterin transporter n=2 Tax=Ectocarpus Ta... [more]
A0A1Z5K9Z9_FISSO2.750e-845.83Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1FNC7_9STRA2.760e-843.94Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A8K1FJ66_PYTOL2.430e-737.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CA45_SAPPC4.080e-639.39Uncharacterized protein n=2 Tax=Saprolegnia parasi... [more]
A0A067BNQ4_SAPPC7.620e-637.88Uncharacterized protein n=2 Tax=Saprolegnia parasi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59499contigEcto-sp13_S_contig59499:8..226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59499.16499.1mRNA_Ecto-sp13_S_contig59499.16499.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59499 8..226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59499.16499.1 ID=prot_Ecto-sp13_S_contig59499.16499.1|Name=mRNA_Ecto-sp13_S_contig59499.16499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp
WGLTISELFWINALVPLVLVLPLMPFLLEDKKPRETGVLKRHSDELWTLV
QKNAVWRPMIFVYLYNALMVGVS
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