prot_Ecto-sp13_S_contig5949.16498.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5949.16498.1
Unique Nameprot_Ecto-sp13_S_contig5949.16498.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length575
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5949.16498.1 vs. uniprot
Match: D8LK92_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK92_ECTSI)

HSP 1 Score: 610 bits (1574), Expect = 4.700e-207
Identity = 467/579 (80.66%), Postives = 476/579 (82.21%), Query Frame = 0 
Query:    1 MFGRRAR-PLAVLDVPRMAQHPPPRLLLEDLEVFDLPGIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWNKFTFQLAISDPVLLRHSHVSLVVMDKERGRKSKGEVIGVANLSLAEVLWINNSPPASANARSXXXXXXXXXXXXXXXXXXXXSLPRRRRSLSPDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIGAAASAGEEASSISSSQQRRGTGMPRHRSHSSLPWGFFRHHNGGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SDVTSVGCEGQDVACASAAXXXXXXXXXXPGVSPTSTTGTCSRALGGCEPSAGTTTDSKEGSAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQRLGPMFDIPLVKSGLHRGRISGRCTLVLGPGTGVNLLRLGSFRALGPGGVASVGGVGLAGLSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKLRDRASEGGENMGNKAPPGLASKSMSDRVLGKSRRMRSDGGGSGRDSTPAGCVCM 574
            MFGRRAR PLAVLDVPRMAQHPPPRLLLEDLEVFDL GIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWN++ FQLAISDPVLLR SHVSLVVMDKERGRKSKGEVIGVANLSLAEVLWINN PPASANARSXXXXXXXXXXXXXXXXXXX SLP RRRSLSPDRA                                KIG AASAGEE SS+SSSQQRRGTGMPRHRSHSSLPWGFFRH NGGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SD+TSVGCEGQDVA  SAA          PGVSPTSTTGT SRALGGCEPSAGTT DSKEGSA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EQRLGPMFDIPLVKSGLHRGRISGRCTLVLG GTGVNLLRLGS RALGPGGVASVGGVG+AGLSDG                                  AAKLRDRASEGGENMGNKAPPGLA+KS+SDRV  KSRR+RSD GG GRDS PAGCVCM
Sbjct:  383 MFGRRARMPLAVLDVPRMAQHPPPRLLLEDLEVFDLQGIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWNRYAFQLAISDPVLLRQSHVSLVVMDKERGRKSKGEVIGVANLSLAEVLWINNGPPASANARSXXXXXXXXXXXXXXXXXXXSSLPLRRRSLSPDRARHSNGTRERSSSLEGHGRGGGDGSSGVGGQDSKIGEAASAGEETSSLSSSQQRRGTGMPRHRSHSSLPWGFFRHQNGGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMTSVGCEGQDVAGTSAAARAAAA----PGVSPTSTTGTSSRALGGCEPSAGTTADSKEGSAYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EQRLGPMFDIPLVKSGLHRGRISGRCTLVLGSGTGVNLLRLGSVRALGPGGVASVGGVGVAGLSDGDGSSGGA---------------------------AAKLRDRASEGGENMGNKAPPGLAAKSVSDRVFSKSRRLRSDSGGGGRDSAPAGCVCM 929
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BLAST of mRNA_Ecto-sp13_S_contig5949.16498.1 vs. uniprot
Match: A0A6H5KKF7_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF7_9PHAE)

HSP 1 Score: 575 bits (1482), Expect = 5.290e-192
Identity = 490/693 (70.71%), Postives = 499/693 (72.01%), Query Frame = 0 
Query:    1 MFGRRAR-PLAVLDVPRMAQHPPPRLLLEDLEVFDLPGIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWNKFTFQLAISDPVLLRHSHVSLVVMDKERGRKSKGEVIGVANLSLAEVLWINNSPPASANARSXXXXXXXXXXXXXXXXXXXXSLPRRRRSLSPDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKIGAAASAGEEASSISSSQQRRGTGMPRHRSHSSLPWGFFRHHNGGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------SDVTSVGCEGQDVACASAAXXXXXXXXXXPGVSPTSTTGTCSRALGGCEPSAGTTTDSKEGSAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQRLGPMFDIPLVKSGLHRGRISGRCTLVLGPGTGVNLLRLGSFRALGPGGVASVGGVGLAGLSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------AAKLRDRASEGGENMGNKAPPGLASKSMSDRVLGKSRRMRSDGGGSGRDSTPAGCVCM 574
            MFGRR+R PLAVLDV RMAQ PPPRLLLEDLEVFDL GIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWNK++FQLAISDPVLLRHSHVSLVVMDKERGR SKGEVIGVANLSLAEVLWINNSPPASANAR XXXXXXXXXXXXXXXXXXX SL  RRRSLSPDRA                                KIG AASAGEEASS+SSSQQRRGTGMPRHRS SSLPWGFFRHH+GGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            SDVTSVGCEGQDVA ASAAXXXXXXXXXXPGVSPTSTTGTCSRALGGCEPSAGTTTDSKEGSAHXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXX EQRLGPMFDIPLVKSGLHRGRISGRCTL+LGPGTGVNLLRLGS RALGPGGVASVGGVG+AGLSDGXXXXXXXXXXXXXXXXX               XX                                                                                                          AAKLRDRASEGGENMGNKAPPGLAS S+SDRVL K RR+RSD GGSGRDSTPA CVCM
Sbjct:  335 MFGRRSRMPLAVLDVSRMAQPPPPRLLLEDLEVFDLLGIAGGGVRNPYVVFSSDPKHLVKASPAGKPPKTTVKKKTLRAKWNKYSFQLAISDPVLLRHSHVSLVVMDKERGRNSKGEVIGVANLSLAEVLWINNSPPASANARXXXXXXXXXXXXXXXXXXXXSSLSLRRRSLSPDRAHRSNSTRERFSSLEGHGRGSGDGASGVGGRDNKIGEAASAGEEASSLSSSQQRRGTGMPRHRSLSSLPWGFFRHHSGGLSYREDGDSGHNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVTSVGCEGQDVAGASAAXXXXXXXXXXPGVSPTSTTGTCSRALGGCEPSAGTTTDSKEGSAHXXXXXXXXXXXXXXXXFFHNLAGHHLXXXXXXXXXXXXXXXXXXXXXAEQRLGPMFDIPLVKSGLHRGRISGRCTLLLGPGTGVNLLRLGSVRALGPGGVASVGGVGVAGLSDGXXXXXXXXXXXXXXXXXGDLYGSPSPNDLRAAXXXXXXXXXXXCARGLGRLFSVARRGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDIRKGGSRGRQSGGXGEVESRRGAGGRAATFSPPATAAAAKLRDRASEGGENMGNKAPPGLASNSLSDRVLSKPRRLRSDRGGSGRDSTPAVCVCM 1027
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5949.16498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK92_ECTSI4.700e-20780.66C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KKF7_9PHAE5.290e-19270.71C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 24..137
e-value: 1.3E-11
score: 54.5
IPR000008C2 domainPFAMPF00168C2coord: 38..127
e-value: 7.1E-6
score: 26.2
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 30..148
e-value: 2.0E-9
score: 39.5
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 24..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5949contigEcto-sp13_S_contig5949:580..4608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5949.16498.1mRNA_Ecto-sp13_S_contig5949.16498.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5949 547..6620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5949.16498.1 ID=prot_Ecto-sp13_S_contig5949.16498.1|Name=mRNA_Ecto-sp13_S_contig5949.16498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=575bp
MFGRRARPLAVLDVPRMAQHPPPRLLLEDLEVFDLPGIAGGGVRNPYVVF
SSDPKHLVKASPAGKPPKTTVKKKTLRAKWNKFTFQLAISDPVLLRHSHV
SLVVMDKERGRKSKGEVIGVANLSLAEVLWINNSPPASANARSSSFSSAA
AAASAAASSRRRSSLPRRRRSLSPDRARRSNSTHERSSSLEDHGRGSSDG
SCGVGGQDKKIGAAASAGEEASSISSSQQRRGTGMPRHRSHSSLPWGFFR
HHNGGLSYREDGDSGHNTAAVAAAACGDGGGGGLRDHHHHHHHHRRASSG
SGGGSDVTSVGCEGQDVACASAAARATAAAAAAPGVSPTSTTGTCSRALG
GCEPSAGTTTDSKEGSAHGGGTGGGGGGGFNRRSSFFHNLAGHHLHHLHH
HQDEQDGRAAAAAAAAEQRLGPMFDIPLVKSGLHRGRISGRCTLVLGPGT
GVNLLRLGSFRALGPGGVASVGGVGLAGLSDGGGSSGGGMYRGGGVESRR
GAGGRAATFPPPATAAAAKLRDRASEGGENMGNKAPPGLASKSMSDRVLG
KSRRMRSDGGGSGRDSTPAGCVCM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf