prot_Ecto-sp13_S_contig5945.16495.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5945.16495.1
Unique Nameprot_Ecto-sp13_S_contig5945.16495.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5945.16495.1 vs. uniprot
Match: D7FZ24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ24_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 9.480e-8
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    1 MRSRASCEDRSAEKDIGVLLHTQQLSPPVGHAGS 34
            MR+RAS  +RSAEK   VLLHTQQLSPPVGH  S
Sbjct:    1 MRARASGRERSAEKYTSVLLHTQQLSPPVGHERS 34
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5945.16495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ24_ECTSI9.480e-873.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5945contigEcto-sp13_S_contig5945:4808..4909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5945.16495.1mRNA_Ecto-sp13_S_contig5945.16495.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5945 4725..4909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5945.16495.1 ID=prot_Ecto-sp13_S_contig5945.16495.1|Name=mRNA_Ecto-sp13_S_contig5945.16495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MRSRASCEDRSAEKDIGVLLHTQQLSPPVGHAGS
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