prot_Ecto-sp13_S_contig594.16489.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig594.16489.1
Unique Nameprot_Ecto-sp13_S_contig594.16489.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 2.030e-94
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0
Query:    1 MEASSYTLPAAFCFIAVQLTFQASRQATPKRPKRGKVKGGGTSQQQRQAQQGSTATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLACERYL 149
            MEASSYTLPAAFCFIAVQLTFQA+RQATPKRPKRGKVKGGGT+Q+Q+QA QGS ATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALS VGSCGDVPCAIDVREVSPFLAGLACERYL
Sbjct:    1 MEASSYTLPAAFCFIAVQLTFQATRQATPKRPKRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI00165AE3F6 (ribonuclease P protein subunit p14 isoform X1 n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165AE3F6)

HSP 1 Score: 68.6 bits (166), Expect = 8.070e-12
Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   66 VAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGL 143
            V  KTFI+A +K LHGEVG+ A  VDVL +D  +    LRVP+R LV + ++L+L GS  +  CA  V +VSPFL  L
Sbjct:   61 VELKTFIIACLKGLHGEVGA-ALNVDVLKYDEETLSALLRVPSRGLVKLWSSLTLQGSYKNQTCAFRVLQVSPFLLAL 137          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: A0A4W3J7P9_CALMI (Uncharacterized protein n=5 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J7P9_CALMI)

HSP 1 Score: 64.3 bits (155), Expect = 2.400e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   66 VAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            V FK  I+AA++DLHGE+G+ A PVDVL+++       LRV  R LV + +AL+L+G      CA  V +VSPFL  L+
Sbjct:   40 VQFKHLIVAALRDLHGEIGA-ALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALS 117          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI0004574E47 (ribonuclease P protein subunit p14 isoform X1 n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI0004574E47)

HSP 1 Score: 64.3 bits (155), Expect = 3.530e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   66 VAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            V FK  I+AA++DLHGE+G+ A PVDVL+++       LRV  R LV + +AL+L+G      CA  V +VSPFL  L+
Sbjct:   58 VQFKHLIVAALRDLHGEIGA-ALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALS 135          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI001F047F46 (ribonuclease P protein subunit p14-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F047F46)

HSP 1 Score: 63.2 bits (152), Expect = 6.100e-10
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   66 VAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            V  K+FI++AVK LHG VGS    +D+L  D  +GE  LRV + +LV + ++L+L+    D  C  +V++VSP+L  LA
Sbjct:   37 VQLKSFIVSAVKQLHGSVGSSTV-IDILKVDKRNGEIILRVKSSNLVKLWSSLTLINKYNDNACRFNVQQVSPYLMSLA 114          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI0007F8D296 (ribonuclease P protein subunit p14 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0007F8D296)

HSP 1 Score: 61.6 bits (148), Expect = 2.430e-9
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   64 TDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGL 143
            +DV  K+FI+A +K LHGEVG+ A   DVL +D  S    LRV +R LV + ++L+L G   +  CA  V +VSP+L  L
Sbjct:   40 SDVELKSFIIAGLKSLHGEVGA-ALNFDVLKYDEESLTALLRVYSRGLVKLWSSLTLQGFYQNQACAFRVLQVSPYLLAL 118          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI001ABDDCD8 (ribonuclease P protein subunit p14-like isoform X2 n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDDCD8)

HSP 1 Score: 61.6 bits (148), Expect = 4.640e-9
Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   68 FKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            FK+FIL+A+K+LHGEVG+ + P+D+L +D  +    LR+ +  LV +  +L+L+G      C++ V + SPFL  LA
Sbjct:   76 FKSFILSALKELHGEVGA-SIPLDLLKFDGQTLYAILRIKSSGLVKLWTSLTLLGQYQGHQCSVRVLQTSPFLLALA 151          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: H2MDH7_ORYLA (Ribonuclease P/MRP subunit p14 n=5 Tax=Oryzias TaxID=8089 RepID=H2MDH7_ORYLA)

HSP 1 Score: 60.5 bits (145), Expect = 7.960e-9
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   66 VAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGL 143
            V  K FI+A +K+LHGEVG+ A   DVL +D  S    LRV +  LV + ++L+L+GS  +  CA  V +VSPFL  L
Sbjct:   50 VELKHFIIAGLKNLHGEVGA-ALNFDVLKYDEGSLTALLRVHSSGLVKLWSSLTLLGSYQNQSCAFRVLQVSPFLLAL 126          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI001AACA93D (ribonuclease P protein subunit p14-like isoform X2 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AACA93D)

HSP 1 Score: 60.1 bits (144), Expect = 9.640e-9
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   58 QGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            +GV L T   +K+ I++AVK+LHGEVG+ + P+D+L +D  +    LR+ +   V +  +L+L+G   +  C+I V +VSPFL  LA
Sbjct:   36 EGVKL-TAAQYKSLIVSAVKELHGEVGA-SCPLDLLKYDDKTLSAILRINSSGFVKLWTSLTLLGHYQNQECSIRVLQVSPFLLALA 120          
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Match: UPI0008550BAE (ribonuclease P protein subunit p14 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008550BAE)

HSP 1 Score: 58.2 bits (139), Expect = 5.240e-8
Identity = 33/87 (37.93%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   58 QGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 144
            +GV L T   +K+ I++AVK+LHGEVG+ + P+D+L ++  +    LR+ +   V +  +L+L+G   +  C++ V +VSPFL  LA
Sbjct:   36 EGVKL-TAAQYKSLIVSAVKELHGEVGA-SCPLDLLKYEEKTLSAILRIRSSGFVKLWTSLTLLGQYQNQACSVCVIQVSPFLLALA 120          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig594.16489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LNR1_ECTSI2.030e-9495.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00165AE3F68.070e-1250.00ribonuclease P protein subunit p14 isoform X1 n=2 ... [more]
A0A4W3J7P9_CALMI2.400e-1046.84Uncharacterized protein n=5 Tax=Callorhinchus mili... [more]
UPI0004574E473.530e-1046.84ribonuclease P protein subunit p14 isoform X1 n=1 ... [more]
UPI001F047F466.100e-1043.04ribonuclease P protein subunit p14-like n=1 Tax=Xe... [more]
UPI0007F8D2962.430e-945.00ribonuclease P protein subunit p14 n=1 Tax=Kryptol... [more]
UPI001ABDDCD84.640e-941.56ribonuclease P protein subunit p14-like isoform X2... [more]
H2MDH7_ORYLA7.960e-946.15Ribonuclease P/MRP subunit p14 n=5 Tax=Oryzias Tax... [more]
UPI001AACA93D9.640e-940.23ribonuclease P protein subunit p14-like isoform X2... [more]
UPI0008550BAE5.240e-837.93ribonuclease P protein subunit p14 n=1 Tax=Nanoran... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085Rnp2-like domain superfamilyGENE3D3.30.70.3250coord: 60..148
e-value: 6.2E-6
score: 28.1
IPR038085Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 64..142
IPR002759Ribonuclease P/MRP protein subunitPFAMPF01900RNase_P_Rpp14coord: 67..137
e-value: 4.7E-5
score: 23.6
NoneNo IPR availablePANTHERPTHR15441FAMILY NOT NAMEDcoord: 65..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig594contigEcto-sp13_S_contig594:15277..17132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig594.16489.1mRNA_Ecto-sp13_S_contig594.16489.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig594 14600..17217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig594.16489.1 ID=prot_Ecto-sp13_S_contig594.16489.1|Name=mRNA_Ecto-sp13_S_contig594.16489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
MEASSYTLPAAFCFIAVQLTFQASRQATPKRPKRGKVKGGGTSQQQRQAQ
QGSTATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSG
EGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLACERYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038085Rnp2-like_sf
IPR002759RNase_P/MRP_subunit