mRNA_Ecto-sp13_S_contig5934.16482.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5934.16482.1
Unique NamemRNA_Ecto-sp13_S_contig5934.16482.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A6H5K7N2_9PHAE (LysM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N2_9PHAE)

HSP 1 Score: 508 bits (1309), Expect = 1.050e-158
Identity = 472/553 (85.35%), Postives = 480/553 (86.80%), Query Frame = 1 
Query:    4 QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SKMFAGAATPVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPHNHNY-----QVLGMLGGXXXXXXXXXXXXXXXXXMAEAGQEAEYRVLCEKVLARRDHKEVAVRRTVMALLAELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAPTLWHSVREVVKEGLAEDRRDFCPQSLACLEMIVIIGSAXXXXXXXXXXXXXXXXXXXXXXXXXX-AGRISPTPHLLSAPTSPRPMTGNKSSPSTSSETGLLVPQDTSVVVGVVMDSEGEVLLSNVSEDDR 1629
            QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAV+YDRRG FFETIWLVVNDLT     VR               +STPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKMFAGAATPVGA  XXXXXXXXXXXXXXXXXXXXXXXXX                     XXXXXX            QVLGMLG    XXXXXXXXXXXXXXMAEA QEAEYR+LCE+VLARRDHKEVAVRRTVMALL ELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAP+LWHSVREVVKEGLAEDRRDFCPQSLACLEMIVIIGSAXXXXXXXXXXXXXXXXXXXXXXXXXX  GRISPTPHLLSAPTSPRPMTGNKSSPSTSSETGLL+PQDTSVVVGVVMDSEGEV+ SNV  DDR
Sbjct:   83 QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAVVYDRRGAFFETIWLVVNDLT-----VRGGG------------ESTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKMFAGAATPVGAPSXXXXXXXXXXXXXXXXXXXXXXXXXAQSQKGRGAFFPEGAGSVAVTXXXXXXXXXXXXXXXXXXQVLGMLG----XXXXXXXXXXXXXXMAEAEQEAEYRLLCERVLARRDHKEVAVRRTVMALLPELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAPSLWHSVREVVKEGLAEDRRDFCPQSLACLEMIVIIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRISPTPHLLSAPTSPRPMTGNKSSPSTSSETGLLLPQDTSVVVGVVMDSEGEVVPSNVGGDDR 614
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BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: D7G554_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G554_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 2.880e-154
Identity = 426/453 (94.04%), Postives = 433/453 (95.58%), Query Frame = 1 
Query:    4 QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SKMFAGAATPVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPHNHNYQ-----VLGMLGGXXXXXXXXXXXXXXXXXMAEAGQEAEYRVLCEKVLARRDHKEVAVRRTVMALLAELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAPTLWHSVREVVKEGLAEDRRDFCPQSLACLEMIV 1341
            QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAV+YDRRG FFETIWLVVNDLTSA VRVRAAAALGAML+LVHERQSTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SKMFAGAATPVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NYQ     VLGMLGG   XXXXXXXXXXXXX MAEAGQEAEYRVLCE+VLARRDHKEVAVRRTVMALL ELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAPTLWHSVREVVKEGLAEDRRDFCPQSLACLE+++
Sbjct:  115 QVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAVVYDRRGAFFETIWLVVNDLTSAVVRVRAAAALGAMLQLVHERQSTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMFAGAATPVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NYQAPGTPVLGMLGGGAAXXXXXXXXXXXXX-MAEAGQEAEYRVLCERVLARRDHKEVAVRRTVMALLPELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLARLGLAAGTGVWRGAPTLWHSVREVVKEGLAEDRRDFCPQSLACLEVLL 565
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A3D8QXE6_9HELO (Non-specific serine/threonine protein kinase n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8QXE6_9HELO)

HSP 1 Score: 83.2 bits (204), Expect = 7.380e-13
Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++    + E +RYA  L+LREL  NAP +MY   G  F+ IW+ + D     +R  AA A+ A  +++ ER    + S    + D+  +G +QGT E VHGSLLVI++LL+  G +M H H
Sbjct:  138 KTALEWLQ--SDRVEEKRYAAVLILRELGRNAPTLMYTFVGLIFDLIWVGLRD-QRLLIRSTAAEAISACFQIIRERDQGLRQSWQTKIYDEAVQGVKQGTVEYVHGSLLVIKELLQQGGMFM-HEH 260
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BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A1Y1YP63_9FUNG (Non-specific serine/threonine protein kinase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YP63_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 9.690e-13
Identity = 48/128 (37.50%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPK---HSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++  G + E +R+A  L+L+ELA++AP ++Y       E +W+ + D + A +R   A  LGA L++V+ R+S  +   + RL  D+ + GF+ GTAE +HGSLL   +LL+H G +M  R+
Sbjct:  140 KSALEWLQ--GDRNEFRRHAAVLILKELAQSAPTLIYFHVNQILENLWVALRD-SKAIIRESGANCLGACLKIVYYRESQIRVQWYCRLY-DECQRGFKLGTAECIHGSLLAFLELLQHTGMFMHERY 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A2J6SYN1_9HELO (Serine/threonine-protein kinase TOR n=1 Tax=Hyaloscypha bicolor E TaxID=1095630 RepID=A0A2J6SYN1_9HELO)

HSP 1 Score: 81.6 bits (200), Expect = 2.240e-12
Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++    + E +RY+  LVLRELA NAP +MY   G  F+ IW+ + D     +R  AA A+ A  +++ ER    + +    + D+  +G  QG+ E +HGSLLVI++LL+  G +M H H
Sbjct:  140 KTALEWLQ--SDRVEERRYSAVLVLRELARNAPTLMYTFVGLIFDQIWVGLRD-QRLLIRQTAAEAISACFQIIRERDQAMRQTWQAKIYDEAVQGVRQGSVEYIHGSLLVIKELLQQGGMFM-HEH 262
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: U9U970_RHIID (Serine/threonine-protein kinase TOR n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9U970_RHIID)

HSP 1 Score: 81.3 bits (199), Expect = 2.420e-12
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1 
Query:   58 GPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHR 405
            G + E++RYA ALVLRELA+NAP ++Y    +  + IW+ + D     +R  +A  L A L++V+ER+S+ +      + D+     + G A+++HG+LL  R+LL H   +M  R++
Sbjct:  126 GDRNESRRYAAALVLRELAQNAPTLIYTYVSSILDNIWVGLRD-QKQIIREASAETLSACLKIVYERESSMRIQWYTKIYDEASRNLKPGNADQIHGALLAYRELLHHAKSFMHERYK 242
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A015K3X5_RHIIW (Serine/threonine-protein kinase TOR n=10 Tax=Glomeraceae TaxID=36751 RepID=A0A015K3X5_RHIIW)

HSP 1 Score: 81.3 bits (199), Expect = 2.930e-12
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1 
Query:   58 GPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHR 405
            G + E++RYA ALVLRELA+NAP ++Y    +  + IW+ + D     +R  +A  L A L++V+ER+S+ +      + D+     + G A+++HG+LL  R+LL H   +M  R++
Sbjct:  126 GDRNESRRYAAALVLRELAQNAPTLIYTYVSSILDNIWVGLRD-QKQIIREASAETLSACLKIVYERESSMRIQWYTKIYDEASRNLKPGNADQIHGALLAYRELLHHAKSFMHERYK 242
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A2J6SCI1_9HELO (Serine/threonine-protein kinase TOR n=1 Tax=Hyaloscypha variabilis F TaxID=1149755 RepID=A0A2J6SCI1_9HELO)

HSP 1 Score: 81.3 bits (199), Expect = 2.960e-12
Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++    + E +RY+  LVLRELA NAP +MY   G  F+ IW+ + D     +R  AA A+ A  +++ ER    + +    + D+  +G  QG+ E +HGSLLVI++LL+  G +M H H
Sbjct:  139 KTALEWLQ--SDRVEERRYSAVLVLRELARNAPTLMYTFVGLVFDQIWVGLRD-PRLLIRQTAAEAISACFQIIRERDQAMRQTWQAKIYDEAVQGVRQGSVEYIHGSLLVIKELLQQGGMFM-HEH 261
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A061HFB7_BLUGR (Non-specific serine/threonine protein kinase n=3 Tax=Blumeria TaxID=34372 RepID=A0A061HFB7_BLUGR)

HSP 1 Score: 81.3 bits (199), Expect = 2.960e-12
Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++    + E +RY+  LVLRELA NAP +MY   G  F+ IW+ + D     +R  AA A+ A  +++ ER  + + +    + D    G  QGT E +HGSLLVI++LL+  G +M H H
Sbjct:  141 KTALEWLQ--SDRVEERRYSAVLVLRELARNAPTLMYAFVGLVFDQIWVGLRD-QRLLIRQTAAEAISASFQIIRERDQSMRQTWQLKIYDGAVTGIRQGTVENIHGSLLVIKELLQQGGMFM-HEH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Match: A0A3E2HJR0_SCYLI (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HJR0_SCYLI)

HSP 1 Score: 81.3 bits (199), Expect = 2.960e-12
Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 1 
Query:   28 KPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRGTFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHS--RLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 402
            K A+E ++    + E +RY+  LVLREL  NAP +MY   G  F+ IW+ + D     +RV AA A+ A  +++ ER    + +    + D+  +G  QG+ E +HGSLLVI++LL+  G +M H H
Sbjct:  141 KTALEWLQ--SDRVEERRYSAVLVLRELGRNAPTLMYAFVGLIFDQIWVGLRD-QRLLIRVTAAEAISACFQIIRERDQVMRQTWQAKIYDEAVQGVRQGSVEYIHGSLLVIKELLQQGGMFM-HDH 263
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5934.16482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7N2_9PHAE1.050e-15885.35LysM domain-containing protein (Fragment) n=1 Tax=... [more]
D7G554_ECTSI2.880e-15494.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3D8QXE6_9HELO7.380e-1339.37Non-specific serine/threonine protein kinase n=2 T... [more]
A0A1Y1YP63_9FUNG9.690e-1337.50Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2J6SYN1_9HELO2.240e-1237.80Serine/threonine-protein kinase TOR n=1 Tax=Hyalos... [more]
U9U970_RHIID2.420e-1235.59Serine/threonine-protein kinase TOR n=1 Tax=Rhizop... [more]
A0A015K3X5_RHIIW2.930e-1235.59Serine/threonine-protein kinase TOR n=10 Tax=Glome... [more]
A0A2J6SCI1_9HELO2.960e-1237.80Serine/threonine-protein kinase TOR n=1 Tax=Hyalos... [more]
A0A061HFB7_BLUGR2.960e-1238.58Non-specific serine/threonine protein kinase n=3 T... [more]
A0A3E2HJR0_SCYLI2.960e-1237.80Non-specific serine/threonine protein kinase (Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5934contigEcto-sp13_S_contig5934:2..4162 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score467.6
Seed ortholog evalue7.8e-129
Seed eggNOG ortholog2880.D7G554
Model size1629
KEGG koko:K06642,ko:K07203,ko:K08873
KEGG Pathwayko01521,ko01522,ko03015,ko03450,ko04012,ko04066,ko04072,ko04110,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map03015,map03450,map04012,map04066,map04072,map04110,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00297
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
EC2.7.11.1
Cds size1629
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03032,ko03400,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463825.2148056-CDS-Ecto-sp13_S_contig5934:1..2981681463825.2148056-CDS-Ecto-sp13_S_contig5934:1..298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5934 2..298 -
1681463825.2308488-CDS-Ecto-sp13_S_contig5934:992..11691681463825.2308488-CDS-Ecto-sp13_S_contig5934:992..1169Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5934 993..1169 -
1681463825.2397811-CDS-Ecto-sp13_S_contig5934:1438..22861681463825.2397811-CDS-Ecto-sp13_S_contig5934:1438..2286Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5934 1439..2286 -
1681463825.248357-CDS-Ecto-sp13_S_contig5934:2980..30951681463825.248357-CDS-Ecto-sp13_S_contig5934:2980..3095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5934 2981..3095 -
1681463825.2639441-CDS-Ecto-sp13_S_contig5934:3970..41621681463825.2639441-CDS-Ecto-sp13_S_contig5934:3970..4162Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5934 3971..4162 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5934.16482.1prot_Ecto-sp13_S_contig5934.16482.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5934 2..4162 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5934.16482.1

>prot_Ecto-sp13_S_contig5934.16482.1 ID=prot_Ecto-sp13_S_contig5934.16482.1|Name=mRNA_Ecto-sp13_S_contig5934.16482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp
FQVLEREFAKPAMELIKVTGPKGENQRYAGALVLRELAENAPAVMYDRRG
TFFETIWLVVNDLTSAAVRVRAAAALGAMLRLVHERQSTPKHSRLVLDKI
EEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRHRRRRRRRRGSTEDNNP
GPYYGGGGSGGATSGTATPFGGGAVTPLGGGGGGGAATPVTNNNSSGVRL
APQMLPPPARGTGGGGGSGGDLSKMFAGAATPVGAPSTAGSGGGGGGGNA
AGGGPSTAQSQKGRGAFFPEGGGSVAATAAARGVVPPPPSPHNHNYQVLG
MLGGGAAGAGAAAAAAAAAAAMAEAGQEAEYRVLCEKVLARRDHKEVAVR
RTVMALLAELVAFFPGGAGEFVEPAVWFLIHTLRQGQRSDRGLAYLSLAR
LGLAAGTGVWRGAPTLWHSVREVVKEGLAEDRRDFCPQSLACLEMIVIIG
SASAATDAAAAAQLGGEGGAAAAAAAAAAGRISPTPHLLSAPTSPRPMTG
NKSSPSTSSETGLLVPQDTSVVVGVVMDSEGEVLLSNVSEDDR
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mRNA from alignment at Ecto-sp13_S_contig5934:2..4162-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5934.16482.1 ID=mRNA_Ecto-sp13_S_contig5934.16482.1|Name=mRNA_Ecto-sp13_S_contig5934.16482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4161bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5934:2..4162- (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCAGGTGTTGGAGCGAGAGTTCGCGAAGCCGGCTATGGAGCTGATAAA
GGTGACCGGCCCGAAGGGCGAAAATCAGAGGTACGCCGGCGCCCTGGTGC
TCCGGGAGCTGGCGGAGAACGCTCCGGCCGTCATGTACGACAGGCGGGGG
ACCTTCTTTGAGACCATCTGGCTGGTGGTGAACGACCTCACGGTGAGAGG
AGGGGGCGGGGGTACTCATAGTCGTGCATGCCGTAGTCGCAAGACCGTTG
AAGATGCTGGGGGGGGGGGGGGGGGGTCTTGTTCGCGGAGAATTTGTGTG
TACTCATGCCTGGTGGGACAAACGCCTCGTCCCTCTGCTGTGGGGGCTGC
CGGTCGAGACTAGACCTCTGCGGTCGTTGTTGTTGGTGTTGATGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTTGTTGTTGCTGTTGTTGATGGCAATCA
GTGTTGTTGATGTTGTTGTTGTTGTTGTTGCTGGTGTTGGTGTTGATGTT
GTTGGTGGTGGTGGTCGTGGTGGTCGTGGTCGTGGTCGCGGTGATGTCGG
CTGTGGTGGTCAATGACCTCACGGCGAGAGGACGAAAAGGGGGGATGTGG
ACTATGTTTGTCTCCAGCGGCCGTGGATTTTATCCGCGTAAGAAGTCCTG
TGTGGACCTGGTTGAACAAGCGCGTCGTCCGTTGACAGCAATGGACCTGC
AGCCATGAGGCAAATAGACCTCTGCTGTTCTGTCGCTGTTTTTGTTGGCG
CACTTTGATTGATTTTAGAACAAGAGCGCGTGTAGCTCTGAGTGATTTAG
CGGTCAGGGAGGATCTCCCTCTCGCGCTCTCGCCCTTCCTCCCTCCCTCT
CCCTCGATTTTTCTGTCTGTCTGTCTGTCTCCATGTATATATTTGTCTTT
CTCCTTCTCTCTGTTGCTATCCGGCCTCCAACATCCTTTCACCCATGAAG
CGCAGCAGCCCTCGCAACATTGCTCCACCATTTGTTCAACCACCGTCCGA
TTGTCTGTCTTGTGTTTTCCGGCGGTGACTGTACCGGTTCGTGATGAAAC
CGATATTTGTGGTTAAGTCGGCGGCGGTGCGTGTCCGAGCGGCCGCCGCC
CTCGGGGCTATGCTTCGGCTGGTGCACGAGAGGCAGAGCACACCCAAGCA
CTCGCGACTCGTGCTAGACAAGATCGAGGAAGGTATGCATACACTACGCT
GATGTAGCCTTATCACATGTGTATTGTAGTGTACGTAGCCTCGCGGTCGT
CTCTCCTTGAGGAGACTGCTGAGATCGAAGAGAGGACATTGCGTAGCTCG
TGCATACGTGTGTGGTGTGAGTAGCGTCGTGGCCGTTTGTTGTTGGGAGG
AATCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTATGAGTTCTTATGTG
CGTACGTTGTTGTCTTCCCATAAAATAAACATTCCATGGTATACAGTACA
TGATCGAAGAAGGAATATCGTCAGTAGCACCACGTATGCACGGTAGGGTT
AGGGTCAGGAGAATAGCTGATGCTGTTGCTGTTGCTGTCAGTGCTTGTGC
GCCTATGCAGTTTGTGAACCCACCGATAGCGAACGTTGTTGTTATGGCGT
TCGTACCCACCGATTATCCATCGACGACGACTACTCGTCTTCGGCAACAT
GTTCTTTTTTATTTGTACATATTTTTGTCTTCCATCATAGCGCATTCATC
TCCTCCGCAGACAATTAGTATTAGTTTTTGTCTCACAAGAACACAGCGCA
TTTATCTCCTGCGCAGATAATTAGTCCGGGATAGATTAGTAGCAATGAAT
TCATAGTGTTTTATTGTGATGACCAACTGTCGATTTTCCTACGCAAAACA
CGCTCGACGCTTGGCAAAAAACAAAGGCTTCGAGCAAGGCACGGCCGAAC
GAGTCCACGGCAGCCTCCTCGTCATCCGGCAGCTCCTGCGACACCCGGGG
CCCTGGATGGCGCACCGCCACCGGCGCCGCCGTCGACGCCGACGGGGGAG
CACGGAAGACAACAACCCGGGCCCCTACTACGGCGGTGGCGGCAGCGGCG
GCGCGACTTCGGGCACGGCGACTCCGTTCGGAGGGGGCGCGGTGACGCCC
CTCGGAGGAGGAGGGGGAGGAGGAGCGGCCACCCCTGTCACGAATAACAA
TAGCAGCGGCGTGCGGCTGGCGCCGCAGATGCTCCCTCCCCCCGCGCGGG
GCACCGGTGGCGGGGGCGGCAGCGGCGGCGATCTGTCGAAGATGTTCGCC
GGTGCCGCCACCCCCGTGGGCGCGCCAAGCACCGCCGGGAGCGGCGGCGG
CGGCGGCGGCGGTAACGCTGCCGGTGGTGGGCCATCCACGGCACAGTCGC
AGAAAGGTCGTGGCGCTTTCTTCCCCGAAGGCGGCGGTAGCGTAGCGGCG
ACAGCGGCAGCGAGGGGCGTGGTGCCCCCGCCCCCGTCCCCCCACAACCA
CAACTACCAGGTGCTGGGGATGCTGGGCGGGGGTGCGGCGGGGGCGGGGG
CGGCAGCGGCGGCGGCGGCGGCAGCGGCGGCGATGGCGGAGGCCGGACAG
GAGGCGGAGTATCGGGTTCTCTGCGAGAAGGTGCTGGCCCGCAGGGACCA
CAAGGAGGTCGCCGTGAGGAGGACGGTGATGGCGCTGCTGGCGGAGCTGG
TGGCATTCTTTCCGGGGGGGGCGGGGGAGTTCGTGGAGCCAGCCGTGTGG
TTCCTCATCCACACGCTCCGGCAGGTAAGGCGATTGTACAAACAGCGTGT
TGTTTTTGGTTGTGCTGCCGTGGTGGTGGTGGGTTTGGGCTTCCATCGCT
GTACGTCGACGCTTTCTCTCTGTTCGCGTTGTGTGCCTCCTTACCCTCCT
CCTCCTCCTCCTCCTCTTCCTCTTCCTCTTTGGTTGCTCCGATTCTTCTC
CTTGCCCTTCTTCATTTCTCTCTCTTTGCTTGCGTGTGTGCTTCCTACTC
TTCCTCCTTGTTTTCTGCCGGGGCGGGGCGGGACGGAACGCAGGGCCAGC
GAAGCGATCGGGGCCTGGCCTACCTGTCGCTAGCGAGGCTCGGGCTGGCC
GCGGGCACCGGGGTGTGGCGCGGAGCCCCGACGCTGTGGCACAGCGTTCG
GGAGGTGGTGAAGGAAGGGTTGGCGGAGGATCGGCGGGACTTCTGCCCTC
AGTCTCTGGCCTGTCTCGAGGTATTGCTCAAGGATCCCGATAGACGGGAA
TTGAACACTCTCTCCTCGGAGCCCCACGATAAACCCAACAAACTTTAAAC
CCAACAAACTTATATGGTATACATGCACTGTACGCGTCCGGTGCCTCTGG
CTGTAGTATGTTTTTTTTTTTATTTCTTATTGGCATCGTCCGCGCTGACC
ACTGAAAATGACGTCTGAATTTATTGGCTTTAGGTCGGGGAGGGGACGCG
ATAGTTTTTTCCCCGGGTCTTGCTGGCTGGGCGGGGAGCAAGAGATTGGT
TCTCCGTGGGGGTGGGGGTGGAGGTGGGCTCGTGGAAAGAAATATACGTA
TTTGACGGCGGATCCCCCAGGTTTTGGTGTGTGTGTGTGTGGTTTCGCTC
TTGAGACTCATCGCAAACTGTTGTTGTTAGTTCGGCATTGGGTCGAATAA
ATCAAGTCTCCCTTGGTGAGGTGGAGGGGGGGGAGGACTCTTGGAAACGC
ATCACTTGTTGGACGGCGGTGCCCCCTGTTCTTGGTTTGTGTATGTTGTG
GTAGCTGTTTGCACCCGTCGCAGATGATTATCGTGATTGGCTTGGCGTTG
GCACGTCGAAGAGATGGAAGTTTCCCTGAGGGGGCAGGCGTAGTGACTGG
TGAAAACGCATGCACGTGTTCGATGGCGGCGGCGCCCCCTGTCCTTTGCT
CCCGTCCTCCTCAGATGATCGTCATTATTGGATCAGCGTCCGCAGCCACC
GACGCCGCCGCGGCAGCGCAACTAGGAGGCGAAGGAGGAGCAGCAGCAGC
AGCAGCAGCAGCGGCGGCGGGGCGAATCTCCCCAACCCCGCACCTCCTGT
CGGCTCCGACCTCCCCACGGCCAATGACAGGCAACAAGTCTAGCCCGTCC
ACTTCCTCGGAGACGGGCCTTCTCGTTCCGCAAGACACGTCCGTGGTTGT
TGGGGTCGTGATGGACTCCGAGGGAGAGGTTTTGCTATCGAACGTTAGCG
AGGACGATCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5934:2..4162-

>mRNA_Ecto-sp13_S_contig5934.16482.1 ID=mRNA_Ecto-sp13_S_contig5934.16482.1|Name=mRNA_Ecto-sp13_S_contig5934.16482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1629bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5934:2..4162- (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCAGGTGTTGGAGCGAGAGTTCGCGAAGCCGGCTATGGAGCTGATAAA
GGTGACCGGCCCGAAGGGCGAAAATCAGAGGTACGCCGGCGCCCTGGTGC
TCCGGGAGCTGGCGGAGAACGCTCCGGCCGTCATGTACGACAGGCGGGGG
ACCTTCTTTGAGACCATCTGGCTGGTGGTGAACGACCTCACGTCGGCGGC
GGTGCGTGTCCGAGCGGCCGCCGCCCTCGGGGCTATGCTTCGGCTGGTGC
ACGAGAGGCAGAGCACACCCAAGCACTCGCGACTCGTGCTAGACAAGATC
GAGGAAGGCTTCGAGCAAGGCACGGCCGAACGAGTCCACGGCAGCCTCCT
CGTCATCCGGCAGCTCCTGCGACACCCGGGGCCCTGGATGGCGCACCGCC
ACCGGCGCCGCCGTCGACGCCGACGGGGGAGCACGGAAGACAACAACCCG
GGCCCCTACTACGGCGGTGGCGGCAGCGGCGGCGCGACTTCGGGCACGGC
GACTCCGTTCGGAGGGGGCGCGGTGACGCCCCTCGGAGGAGGAGGGGGAG
GAGGAGCGGCCACCCCTGTCACGAATAACAATAGCAGCGGCGTGCGGCTG
GCGCCGCAGATGCTCCCTCCCCCCGCGCGGGGCACCGGTGGCGGGGGCGG
CAGCGGCGGCGATCTGTCGAAGATGTTCGCCGGTGCCGCCACCCCCGTGG
GCGCGCCAAGCACCGCCGGGAGCGGCGGCGGCGGCGGCGGCGGTAACGCT
GCCGGTGGTGGGCCATCCACGGCACAGTCGCAGAAAGGTCGTGGCGCTTT
CTTCCCCGAAGGCGGCGGTAGCGTAGCGGCGACAGCGGCAGCGAGGGGCG
TGGTGCCCCCGCCCCCGTCCCCCCACAACCACAACTACCAGGTGCTGGGG
ATGCTGGGCGGGGGTGCGGCGGGGGCGGGGGCGGCAGCGGCGGCGGCGGC
GGCAGCGGCGGCGATGGCGGAGGCCGGACAGGAGGCGGAGTATCGGGTTC
TCTGCGAGAAGGTGCTGGCCCGCAGGGACCACAAGGAGGTCGCCGTGAGG
AGGACGGTGATGGCGCTGCTGGCGGAGCTGGTGGCATTCTTTCCGGGGGG
GGCGGGGGAGTTCGTGGAGCCAGCCGTGTGGTTCCTCATCCACACGCTCC
GGCAGGGCCAGCGAAGCGATCGGGGCCTGGCCTACCTGTCGCTAGCGAGG
CTCGGGCTGGCCGCGGGCACCGGGGTGTGGCGCGGAGCCCCGACGCTGTG
GCACAGCGTTCGGGAGGTGGTGAAGGAAGGGTTGGCGGAGGATCGGCGGG
ACTTCTGCCCTCAGTCTCTGGCCTGTCTCGAGATGATCGTCATTATTGGA
TCAGCGTCCGCAGCCACCGACGCCGCCGCGGCAGCGCAACTAGGAGGCGA
AGGAGGAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGGGCGAATCTCCC
CAACCCCGCACCTCCTGTCGGCTCCGACCTCCCCACGGCCAATGACAGGC
AACAAGTCTAGCCCGTCCACTTCCTCGGAGACGGGCCTTCTCGTTCCGCA
AGACACGTCCGTGGTTGTTGGGGTCGTGATGGACTCCGAGGGAGAGGTTT
TGCTATCGAACGTTAGCGAGGACGATCGG
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