prot_Ecto-sp13_S_contig5933.16480.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5933.16480.1
Unique Nameprot_Ecto-sp13_S_contig5933.16480.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length743
Homology
BLAST of mRNA_Ecto-sp13_S_contig5933.16480.1 vs. uniprot
Match: A0A6H5KD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD91_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 1.560e-167
Identity = 535/766 (69.84%), Postives = 548/766 (71.54%), Query Frame = 0
Query:    1 MSEDSLGFEPSKPRRAETHRPAPSPRFKDRRPDPTGRRRRSSSRTRSRSGDRAGTAADASSXXXXXXXXXXXXXXNAASSGRAGLMKXXXXXXXXXXXXXXXXXXXXXXGGKGDAKSPASPKPTKTGKKQKSPACADAPGSTTKRSGSTGCGGDTDGADGAGRGGKRXXXXXXXXXXXXXXXXXXXXXXXXXEKNNYRVTSLLRSVSQSSAVARKVGGTSITDAGVAAGPASAXXXXXXXXXXXXXXXXXXXXXXAKVGPGAKEAXXXXXXXXXXXXXXXXXXXXAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAKAVTTATTGA------------------------VSASAPPPSTKATPEKPTAAAPHPSSSDKKNKNASVSGAKAAGATGRGNVACVPRSVAMRPPAAGIREPARLAGAAKKPGGVRAPAAAPGSSSGKVAAGERADAAGAAPKPMNMVVFSNVGKVGGGWWGGSAKKPVSQVAYSTPGAGAAADRRETPTAMRAETAVAAPAAAVATDVSPLPSGELSQQRHRGSXXXXXXXXXXXXXXXXXXXXXXXXXXSTEALGKNKKAVVAPSSAGVAEEGSKIALPARFSSEAPSASSPAGAAEKPKREGATGAGVRGWLEVAPAAARRGESXXXXXXXXXXXXXXPAALSLQAAAKVRKPRPSKPAVPVAAIFDRGDGRERPFSPRSRAATPQSDQADPPADGKISPRGRTTRWDMKQPTS 742
            M EDSLG EP K  RAE   PAPSPRFKD RPD                 DRAGTA +ASS              NAASSGRAGL+K                      GGKGDAKSPASPKPTKTGKKQKS A ADAPGS +KRSGSTGCGG TDGADGAGRGGKR                         EK+  RVTSLLRS+SQSSAVAR VGGTSITD+GVAA  ASA XX      XXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A A T     A                                      EKP AAAPHPSSSD  NKNA VSGAKAAGATGRG V CVPRSVAMR PAAGIREPA LAGAAKKP GVRAP AAPGSSSG VAAGERADA  AAPKPMN+    +VGKVGGGWWGGSAKKPVSQVAYSTPGA  AA RRET TAM AE AV APAAAVAT VSPL SGELSQQR    XXXXXXXXXXXXXXXXXXXXXXXXXXSTE LGKNKK V +PSSA V E+ SKI LPARFS +APSASSPAG A+KPKREGA GA VRGWL+VAPAAARRGES   XXXXXXXXXXXPAALSLQAAA VRKPRPSKPAVPVAAIFD    RE P SPRSRAATPQSDQADPPADGKISPR R TRWDMKQP S
Sbjct: 1126 MREDSLGREPRKASRAEAQPPAPSPRFKDSRPDXXXXXXXXXXXXXXXXXDRAGTATNASSPPPRAGKEGGAGG-NAASSGRAGLVKKAGGKVVKKAKG----------GGKGDAKSPASPKPTKTGKKQKSLASADAPGSASKRSGSTGCGGVTDGADGAGRGGKRRKSLSDGGGGASNAPQGGEGDGGG-EKSYDRVTSLLRSISQSSAVARNVGGTSITDSGVAAAAASASXXPAKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAAAPTAXPAVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPAAAAPHPSSSDN-NKNADVSGAKAAGATGRGKVTCVPRSVAMRSPAAGIREPAPLAGAAKKPSGVRAPPAAPGSSSGNVAAGERADATRAAPKPMNV----DVGKVGGGWWGGSAKKPVSQVAYSTPGAAVAAARRETLTAMTAEAAVPAPAAAVATGVSPLSSGELSQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTETLGKNKKPVTSPSSASVTEKVSKITLPARFSLKAPSASSPAGPADKPKREGAAGAVVRGWLDVAPAAARRGESVMAXXXXXXXXXXXPAALSLQAAANVRKPRPSKPAVPVAAIFD----REVPVSPRSRAATPQSDQADPPADGKISPRVRRTRWDMKQPAS 1870          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5933.16480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD91_9PHAE1.560e-16769.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5933contigEcto-sp13_S_contig5933:5218..8620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5933.16480.1mRNA_Ecto-sp13_S_contig5933.16480.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5933 4660..8686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5933.16480.1 ID=prot_Ecto-sp13_S_contig5933.16480.1|Name=mRNA_Ecto-sp13_S_contig5933.16480.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=743bp
MSEDSLGFEPSKPRRAETHRPAPSPRFKDRRPDPTGRRRRSSSRTRSRSG
DRAGTAADASSPPPRARKKEGGAGGNAASSGRAGLMKKAGGKVVNKAKGG
EKAIMAEAGGGKGDAKSPASPKPTKTGKKQKSPACADAPGSTTKRSGSTG
CGGDTDGADGAGRGGKRRKTSSDDGGGASNAPQEGGEGDGGGEKNNYRVT
SLLRSVSQSSAVARKVGGTSITDAGVAAGPASASASPAKAAPAPAAKAAE
AAAPAAKVGPGAKEAPAGTPAAPATQAVSPAKAAPAATATPAKVTPAAKA
ATAPGTAPVAKAAPTGKPGPTAKAAPAARAAPAAKSAPAAKAAAAPPAKA
VTTATTGAVSASAPPPSTKATPEKPTAAAPHPSSSDKKNKNASVSGAKAA
GATGRGNVACVPRSVAMRPPAAGIREPARLAGAAKKPGGVRAPAAAPGSS
SGKVAAGERADAAGAAPKPMNMVVFSNVGKVGGGWWGGSAKKPVSQVAYS
TPGAGAAADRRETPTAMRAETAVAAPAAAVATDVSPLPSGELSQQRHRGS
SSGGGKAAAVAGESEGGGSSSNAAGGSTEALGKNKKAVVAPSSAGVAEEG
SKIALPARFSSEAPSASSPAGAAEKPKREGATGAGVRGWLEVAPAAARRG
ESMMAGGGGGAAAAKKPAALSLQAAAKVRKPRPSKPAVPVAAIFDRGDGR
ERPFSPRSRAATPQSDQADPPADGKISPRGRTTRWDMKQPTS*
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