prot_Ecto-sp13_S_contig593.16469.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig593.16469.1
Unique Nameprot_Ecto-sp13_S_contig593.16469.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length381
Homology
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BLAST of mRNA_Ecto-sp13_S_contig593.16469.1 vs. uniprot
Match: D8LM49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM49_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 1.460e-88
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0 
Query:  116 MVNVCVALEGSKVEDGXXXXXXXXXATSGSNDVASSAITYIMSQRLVQTYVPPSPQYLTAVYRTLTSSFPEFLDRPLEICDYTGGKRFDWTYPGVRGLPLEAFLLEVGLREDPPWTFPTVLKSLTDRLASAGITTTDELCEAATSGVLLSK 266
            MVNVCVALEGSKV+DG XXXXXX  ATSGSNDVASSAITYIMSQ LVQTYVPPSPQYLTAVYRTLTSSFPEFLDRPLEICDYTGGKR DWTYPGVRGLPLEAFLLEVGLREDPPWTFPTVLK LTDRLASAG+TTTDELCEAATSGVLLSK
Sbjct:    1 MVNVCVALEGSKVKDGDXXXXXXTSATSGSNDVASSAITYIMSQHLVQTYVPPSPQYLTAVYRTLTSSFPEFLDRPLEICDYTGGKRSDWTYPGVRGLPLEAFLLEVGLREDPPWTFPTVLKPLTDRLASAGVTTTDELCEAATSGVLLSK 151
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BLAST of mRNA_Ecto-sp13_S_contig593.16469.1 vs. uniprot
Match: A0A6C0E796_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E796_9ZZZZ)

HSP 1 Score: 61.6 bits (148), Expect = 8.560e-8
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:   21 MFSYGSNNEQQLRARVHSPRLRGRPAYLDGYVRVFGFKSPPWSGSVASVAPKVGGRVYGRFYLMTPEEMEILDLYEAVKLG 101
            +FSYGSNN+ QL  R++    +  PAY + +   FG  S  W+G+V ++ P    +VYG    +   +++ LD +EAV LG
Sbjct:    4 LFSYGSNNKDQLEERLNIKITKIEPAYYENHALAFGSWSKNWNGAVGTLMPLKNEKVYGYLTHLENSDLDRLDKFEAVHLG 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig593.16469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM49_ECTSI1.460e-8894.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6C0E796_9ZZZZ8.560e-837.04Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.490.10coord: 6..190
e-value: 5.2E-20
score: 73.7
IPR009288Gamma-glutamylcyclotransferase, AIG2-likePFAMPF06094GGACTcoord: 21..159
e-value: 3.1E-6
score: 27.8
IPR036568Gamma-glutamyl cyclotransferase-like superfamilySUPERFAMILY110857Gamma-glutamyl cyclotransferase-likecoord: 21..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig593contigEcto-sp13_S_contig593:7160..18162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig593.16469.1mRNA_Ecto-sp13_S_contig593.16469.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig593 7160..18162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig593.16469.1 ID=prot_Ecto-sp13_S_contig593.16469.1|Name=mRNA_Ecto-sp13_S_contig593.16469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=381bp
MSTKMAAANNNDPLQDRFIGMFSYGSNNEQQLRARVHSPRLRGRPAYLDG
YVRVFGFKSPPWSGSVASVAPKVGGRVYGRFYLMTPEEMEILDLYEAVKL
GALSTRRSDIRTQAVMVNVCVALEGSKVEDGDGDDDDNTNATSGSNDVAS
SAITYIMSQRLVQTYVPPSPQYLTAVYRTLTSSFPEFLDRPLEICDYTGG
KRFDWTYPGVRGLPLEAFLLEVGLREDPPWTFPTVLKSLTDRLASAGITT
TDELCEAATSGVLLSKLAAAAAAAAGAAAAAAVAAAATGTAETPANTAAT
AADSSAEKLHSGGGAGSAGGGSGGGGGHGALPTESEAGGRSEEYSEWAEA
LRNLQSRATVADFTEQTVDIIARIVSGQHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009288AIG2-like
IPR036568GGCT-like_sf