mRNA_Ecto-sp13_S_contig5929.16467.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5929.16467.1
Unique NamemRNA_Ecto-sp13_S_contig5929.16467.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE)

HSP 1 Score: 679 bits (1753), Expect = 8.580e-236
Identity = 453/564 (80.32%), Postives = 459/564 (81.38%), Query Frame = 3 
Query:  402 MSSWLMTPILLIAAQTLPTREASAACVEARQAQQPACASSRAGACSSIPTAFVCGLPQRAAARDKNRVVEGDHVSDRLRWGQPKGRRCRPRSRGVQATMDVDGPSDVAGGDGKRSVVVREEVLRQQKEGITAATTVEFPNVQAPTNLPQPGEWLQQXXXXXXXX--LPPAAVAPLNSRVPSSGLNDXXXXRNSSKSK---VKKADPFAAPDNEYTDSFVDSLWINLLSSRMSAAVEAXXXXXXXXXXXXXXXXXXXXXXXXXRSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDATVLGGEKAGQGGAEXXXXXXXNGSVAVSTALAGPGRAAPAAVPASPRRGSGGXGMGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKPQRACHTMPESPLRGP 2078
            MSSWLMTPILLIAAQ+LPTREASAACVEA QAQQPA ASSRAG   S PTAFVCGLPQ+A  RDKNRVVEGDHVSDR RWGQ  G+R RPRSRGVQATMDVDGP DVA    KRSVVVREEVLRQQKEG TAATTVEFPNVQAPTNLPQPGEWLQQXXXXXXX   LPP A APLNSRV  SGL D XXX          VKKADPFAAPDNEYTDSFVDSLWINLLSS        XXXXXXXXXXXXXXXXXXXXXXXXX    XXX    XXXXXXXXXXXXXXXXXXXXXX              DATVLGGEKAGQGGA        NGSVA+S                        X     YTYEDYVALATGLQAGAPERQREVVRG XXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVD+KAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSS+KQPKKPQRACHTMPESPLRGP
Sbjct:    1 MSSWLMTPILLIAAQSLPTREASAACVEAHQAQQPAYASSRAGPSLSFPTAFVCGLPQKAVTRDKNRVVEGDHVSDRQRWGQRNGKRYRPRSRGVQATMDVDGPPDVASSGAKRSVVVREEVLRQQKEGATAATTVEFPNVQAPTNLPQPGEWLQQXXXXXXXLGGLPPTADAPLNSRVSLSGLYDDXXXXXXXXXXXXXVKKADPFAAPDNEYTDSFVDSLWINLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRSXXXXXXXXXXXXXXXXXXXXXXA-------------DATVLGGEKAGQGGAGAANGGGGNGSVALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTYEDYVALATGLQAGAPERQREVVRGVXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDIKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSNKQPKKPQRACHTMPESPLRGP 551
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 3.640e-125
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 3 
Query: 1482 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKPQRACHTMPESPLRGP 2078
            MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQ KK QRACHTMPESPLRGP
Sbjct:    1 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQLKKRQRACHTMPESPLRGP 199
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: A0A835ZB75_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB75_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.000e-52
Identity = 99/191 (51.83%), Postives = 120/191 (62.83%), Query Frame = 3 
Query: 1500 YEDYVALATGLQAGAPER--QREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKPQRACHTMPESP 2066
            Y+ ++ LA G+Q   P+   QR V+ G             YR + PPSKFSAE+NA MC  L  WLVG S +T   V V       G   EVWR  VKVERCRYLEAS+CKG CMNLCK+PTE FFRE+LGMPL + P+F+DLSC F FG +  P  EDPL+ EPC+ +C +S     +  RACHTMPE P
Sbjct:   24 YDTFIVLARGIQLKFPDPADQRAVIAGMLRDALPAWMLHAYRFVSPPSKFSAELNAVMCAILSDWLVGPSTVTTAEVPVA------GGGTEVWRAAVKVERCRYLEASRCKGACMNLCKVPTETFFREELGMPLTLVPDFDDLSCTFTFGVEPAPLAEDPLVVEPCYYQCPASSAAYARSGRACHTMPELP 208
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: A0A2V0P9C6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9C6_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 4.170e-36
Identity = 78/166 (46.99%), Postives = 105/166 (63.25%), Query Frame = 3 
Query: 1500 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCW 1994
            YED+V+++  +  G   + QREVVR              +R LFPP+++SAE NA +    F WLVG+SEL E  V V     G+  RQ   R+ V +++CRYLE+S C G C N+CK+PT+AFF E+ G+PL M PNFEDLSCE  FGQ   P EEDP+ ++PC+
Sbjct:   86 YEDFVSISKEIMRGRGSDAQREVVREVLRNLMPREAPGAFRRLFPPTQWSAEFNALIASMAFFWLVGESELREADVVVGP---GQVRRQ---RSVVYIKKCRYLESSGCVGMCTNMCKVPTQAFFTEEFGLPLTMNPNFEDLSCEMIFGQAPPPVEEDPVYQQPCF 245
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: W1PM95_AMBTC (D27-like_C domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PM95_AMBTC)

HSP 1 Score: 145 bits (367), Expect = 1.550e-35
Identity = 76/184 (41.30%), Postives = 107/184 (58.15%), Query Frame = 3 
Query: 1485 GGGYTYEDYVALA-TGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKP 2033
            GG Y YE +V ++ T +Q  + ++Q+EVVR              +R LFPP+K++AE NA +  P F WLVG S++ E  V+V   K+  G         V + +CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SC+  +GQ   P EEDP+  +PC+     S   P  P
Sbjct:   83 GGLYDYEGFVGVSKTVMQGRSRKQQQEVVREVLLSMLPPGAPAKFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVVE--VEVNGVKQKSG---------VHITKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCDMVYGQAPPPFEEDPVSTQPCYANISGSIANPSSP 255
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: I6PEW1_CHAGL (Putative D27 family protein n=1 Tax=Chaetosphaeridium globosum TaxID=96477 RepID=I6PEW1_CHAGL)

HSP 1 Score: 144 bits (363), Expect = 7.130e-35
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 3 
Query: 1500 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLS 2009
            YE +V ++  +  G +P  Q+  VR              +R LFPP+K SAE+NA++  P F WLVG ++L E  V+V   K+  G         VK+E+CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SCE  +GQ A P EEDP  ++PC+    S
Sbjct:  100 YEGFVDISKRVMQGRSPAEQQASVRRVLLSMLPPEAPASFRKLFPPTKLSAEINAWITVPFFAWLVGPAKLYE--VEVNGVKQWSG---------VKIEKCRYLENSGCVGMCVNMCKVPTQDFFTNEFGLPLTMTPNFEDMSCEMVYGQLAPPVEEDPAYKQPCFAALCS 259
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: A0A0D2N974_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N974_9CHLO)

HSP 1 Score: 144 bits (363), Expect = 1.020e-34
Identity = 79/175 (45.14%), Postives = 109/175 (62.29%), Query Frame = 3 
Query: 1500 YEDYVALATGLQAG-APERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQ 2021
            Y+D+V ++  +  G +  +QREVVR              +R LFPP+++SAE NA +    F WLVG+SEL E   DV+ A E +  RQ   ++ V +++CRYLEAS C G C N+CK+PT+A+F E+ G+PL M PNFEDLSCE  FGQ   P E+DP+  +PC+    S  KQ
Sbjct:   17 YDDFVRISKEIMRGRSAVKQREVVREVLRSLMPREAPGAFRRLFPPTQWSAEFNALIASVAFFWLVGESELREA--DVQVA-EDKVRRQ---KSLVYIKKCRYLEASGCVGMCTNMCKVPTQAYFTEEFGLPLTMKPNFEDLSCEMIFGQAPPPLEQDPVYTQPCFVPQCSLAKQ 185
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: W9RMK3_9ROSA (D27-like_C domain-containing protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RMK3_9ROSA)

HSP 1 Score: 139 bits (351), Expect = 3.540e-34
Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 3 
Query: 1494 YTYEDYVALATGLQAGAPE-RQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLS 2009
            Y YE +V ++  +  G    +Q+EVVR              +R LFPP+K++AE NA +  P F WLVG SE+ E  V+V   K+         R+ V +++CRYLE S C G C+N+CK+PT+ FF  + G+PL M P FED+SCE  +GQ   P EEDP+ ++PC++E  S
Sbjct:   21 YDYESFVDVSKRVMQGRSRMQQQEVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVIE--VEVNGEKQ---------RSGVHIKKCRYLEESGCVGMCVNMCKIPTQDFFTNEFGLPLTMIPKFEDMSCEMVYGQVPPPFEEDPVAKQPCFSEICS 182
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: I6PEW2_9VIRI (Putative D27 family protein (Fragment) n=2 Tax=Penium margaritaceum TaxID=102169 RepID=I6PEW2_9VIRI)

HSP 1 Score: 139 bits (350), Expect = 5.110e-34
Identity = 78/182 (42.86%), Postives = 101/182 (55.49%), Query Frame = 3 
Query: 1503 EDYVALATG----LQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKPQ 2036
            E Y AL       +Q   PE+QR+VV               +R LFPP+K SAE+NA +  PLF WLVG ++LTE  V+V   K+  G         VK+ +CRYLE+S C G C+N+CKLPT+ FF  D G+PL MTPNFED+SCE  FGQ      +DP ++    T C        KP+
Sbjct:   20 EGYDALVDAARRVMQGRTPEQQRQVVANVLMSMLPPNAPATFRRLFPPTKLSAEINAAITVPLFQWLVGPAKLTE--VEVNGVKQWSG---------VKITKCRYLESSGCVGMCVNMCKLPTQDFFTNDFGLPLTMTPNFEDMSCEMVFGQMPPALADDPALQN---TXCFKDTCPMAKPE 187
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BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Match: A0A2P5DJP8_PARAD (Beta-carotene isomerase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DJP8_PARAD)

HSP 1 Score: 140 bits (354), Expect = 7.000e-34
Identity = 72/169 (42.60%), Postives = 102/169 (60.36%), Query Frame = 3 
Query: 1494 YTYEDYVALATGLQAGAPE-RQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWT 1997
            Y YE +V ++  +  G    +Q+EVVR              +R LFPP+K++AE NA +  P F WLVG SE+ E  V+V   K+  G         V +++CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SCE  +GQ   P EEDP+ ++PC++
Sbjct:   93 YDYESFVDVSKRVMQGRSRLQQQEVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVIE--VEVNGVKQKSG---------VLIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCEMVYGQVPPPFEEDPVSKQPCFS 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5929.16467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L107_9PHAE8.580e-23680.32D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
D7FK55_ECTSI3.640e-12598.99D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A835ZB75_9STRA1.000e-5251.83D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A2V0P9C6_9CHLO4.170e-3646.99D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
W1PM95_AMBTC1.550e-3541.30D27-like_C domain-containing protein n=3 Tax=Ambor... [more]
I6PEW1_CHAGL7.130e-3543.27Putative D27 family protein n=1 Tax=Chaetosphaerid... [more]
A0A0D2N974_9CHLO1.020e-3445.14D27-like_C domain-containing protein n=1 Tax=Monor... [more]
W9RMK3_9ROSA3.540e-3441.62D27-like_C domain-containing protein n=2 Tax=Morus... [more]
I6PEW2_9VIRI5.110e-3442.86Putative D27 family protein (Fragment) n=2 Tax=Pen... [more]
A0A2P5DJP8_PARAD7.000e-3442.60Beta-carotene isomerase n=2 Tax=Cannabaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5929contigEcto-sp13_S_contig5929:513..7747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score387.1
Seed ortholog evalue1.4e-104
Seed eggNOG ortholog2880.D7FK55
Model size2460
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.Domain of unknown function (DUF4033)
EggNOG OGs2CN5C@1,2QTYT@2759
Ec32 ortholog descriptionDomain of unknown function DUF4033
Ec32 orthologEc-04_005770.1
Cds size1680
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5929.16467.1prot_Ecto-sp13_S_contig5929.16467.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5929 892..7346 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463823.8531733-UTR-Ecto-sp13_S_contig5929:512..8911681463823.8531733-UTR-Ecto-sp13_S_contig5929:512..891Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5929 513..891 -
1681463823.924526-UTR-Ecto-sp13_S_contig5929:7346..77471681463823.924526-UTR-Ecto-sp13_S_contig5929:7346..7747Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5929 7347..7747 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463823.8664334-CDS-Ecto-sp13_S_contig5929:891..9871681463823.8664334-CDS-Ecto-sp13_S_contig5929:891..987Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 892..987 -
1681463823.8773296-CDS-Ecto-sp13_S_contig5929:1539..16401681463823.8773296-CDS-Ecto-sp13_S_contig5929:1539..1640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 1540..1640 -
1681463823.8895183-CDS-Ecto-sp13_S_contig5929:2138..22891681463823.8895183-CDS-Ecto-sp13_S_contig5929:2138..2289Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 2139..2289 -
1681463823.8985326-CDS-Ecto-sp13_S_contig5929:3960..40531681463823.8985326-CDS-Ecto-sp13_S_contig5929:3960..4053Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 3961..4053 -
1681463823.9073853-CDS-Ecto-sp13_S_contig5929:5004..57961681463823.9073853-CDS-Ecto-sp13_S_contig5929:5004..5796Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 5005..5796 -
1681463823.9160144-CDS-Ecto-sp13_S_contig5929:6899..73461681463823.9160144-CDS-Ecto-sp13_S_contig5929:6899..7346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5929 6900..7346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5929.16467.1

>prot_Ecto-sp13_S_contig5929.16467.1 ID=prot_Ecto-sp13_S_contig5929.16467.1|Name=mRNA_Ecto-sp13_S_contig5929.16467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=560bp
MSSWLMTPILLIAAQTLPTREASAACVEARQAQQPACASSRAGACSSIPT
AFVCGLPQRAAARDKNRVVEGDHVSDRLRWGQPKGRRCRPRSRGVQATMD
VDGPSDVAGGDGKRSVVVREEVLRQQKEGITAATTVEFPNVQAPTNLPQP
GEWLQQQQQQQLGGLPPAAVAPLNSRVPSSGLNDDDDDRNSSKSKVKKAD
PFAAPDNEYTDSFVDSLWINLLSSRMSAAVEAEAAAAAAAAAAAAVGRAK
GNSDNNGRSAIAAAAAPDGSSAGSSGGGDDSAGSPAGEPASVAAAAAAAA
AAGGDATVLGGEKAGQGGAEAANGGGGNGSVAVSTALAGPGRAAPAAVPA
SPRRGSGGGGMGGGYTYEDYVALATGLQAGAPERQREVVRGVLRSVFPAW
FPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGE
GPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRM
TPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQPKKPQRACHT
MPESPLRGP*
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mRNA from alignment at Ecto-sp13_S_contig5929:513..7747-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5929.16467.1 ID=mRNA_Ecto-sp13_S_contig5929.16467.1|Name=mRNA_Ecto-sp13_S_contig5929.16467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7235bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5929:513..7747- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTAGCTCGAGTTCAGCACACCGAGCGCGTTATTACGAGCCACGAGTCGC
CGGACGTACGAACGCACATTCGGGAAGAGTTGACTTGCCGCCTAGAATCA
CCTCACGCGCACGTGCCGAGAGAAGCGCTCATGACGCCAAAGCGGCAGCA
CAGGACCGCAGCAAGAAAAAGCCTTCACGGTCGAAACCCCTTGTAACGGC
CGCTCGACGAGCCTGCGACCTGGCCACGTAAGCTGCCAAGGACTCTCCTG
CAGTCACAAGGCAGCGCCAGCAGCGGTGCAGAACGTCGTGTTTCAGGCAC
TTGCAGGGAAGACATCCAGAGGCACAGCAATAGGCTAAGAAGTACGACGG
AGGAAGCAGGAAACAAGAGGAGCAACACCCTAAGTTCCTCTTCGGCAGGC
CATGTCATCATGGCTGATGACGCCGATTCTTCTGATCGCGGCCCAAACGC
TGCCGACACGGGAGGCGTCAGCCGCATGCGTGGAAGCGCGTCAAGCCCAG
CAGCCGGCTTGTGCGTCATCGAGAGCGGGCGCTTGTTCATCGATCCCAAC
AGCATTCGTGTGTGGGCTCCCACAAAGAGCAGCGGCTCGAGATAAGAACC
GGGTTGTTGAAGGTGACCACGTGAGCGACCGACTGCGGTGGGGACAGCCG
AAAGGGAGGAGATGTAGGCCAAGGTCGCGGGGGGTGCAAGCAACGATGGA
CGTGGATGGACCGTCGGATGTTGCTGGTGGTGACGGAAAGAGGAGCGTAG
TGGTGAGGGAAGAGGTGCTGCGGCAACAAAAGGAAGGAATAACCGCGGCA
ACCACGGTTGAATTTCCGAACGTTCAAGCGCCAACAAACTTGCCGCAGGT
GTGTCTCTTGAAGATGCGACAGACTGCAGTAGTAGACTCCGCAAGATTGC
ACAATAGCTGCTCGCACAAATAGTTTTCCCGACACCAGTTGCTGTTGAGA
CTTCAACACATCCCTTCGAATGACTCAGTGTCTCGATCGGGCAGCATTTC
TGTGATTTTGAAGTATGCTTTGATAGACACTTGCTTCAGTAGTCTACCGC
AGCGGTACCGTTCTGCTGCTGGTTTAACTTGGATTAGGACAGAGGGTGCA
TAGTAACGAAGGATGCCGACGGTAAAGCAGAGGACTTTTCAATGTTAGCC
ACTCGGCGAGCGAAAAAGCTACGAAGGGTAGGCAGGCATGTCCCGATGTA
GTCACAGGAAAGCGCACACTCTAAGAGGCGTGTGTTCATGTACAGACGAG
ATGTGGTACATATACTCTGTGGCGGGAAAATTTACGCTCTTCATGGCAGC
GGTAAATGGTAAATCACAACACACGAAGCTGTTTTTGAATGTGACGGCAA
GTTCAACTACATGTCGTTTTCGGCGAGTGGGCTGGTCATCCACGGACCGC
GGCTAATTTTCGATGCTCGACCAAAAATTGTCTGACGCAGATGAAGCAGA
GTTTCAAAACAGTTTGAAGGATATAATTTCAATTTTCTCCGAATCATTTA
TTCATTCCGAAATCTTGCGCACACTCTCACACCACCCCTGTCATCGCTCG
TACATAGTGTGTGTGTGGGTGGGTTCCTGTAGACCTGCAGTGTTTGCTAC
GGCGGTCGCCATGTTCGCGCCGGTTCCTCAAGATTGACGCCCGGCCTACG
GGACATACAGTAGAGATCGTGAGGCAATGAAAAATAGTCTATGTTTCCTG
GTGTGATGTTTATGGACGCCGCGATGACTTGAGCAGAAATTACCAAAGTC
CGGCTTCGAAGTCCAGCCTGATTTCCCTAACGAAAGCACCGCTATGTGCC
AGCTGCTGGGTGCAGAAGACTATCAGGACATGAGTGCTGCTGCAAGCTCC
TCCTCTGGACGAAAACCTCGAGATATCACTCCGCCATTAACTCTACAAGC
TGTCTCCCGCCGTCCTTTTTCGAACCCTCGAACTTCAAATCTAAACACCA
GCCCGGAGAATGGCTTCAGCAGCAGCAGCAGCAGCAGCTAGGCGGCTTGC
CGCCCGCAGCCGTTGCGCCGCTCAATAGCCGCGTCCCGTCATCCGGGCTT
AACGACGACGACGACGACAGGAATAGCAGTAAGAGTAAGGTTAAGAAGGC
AGACCCCTTCGCGGCCCCCGACAACGAGTACACCGACTCCTTCGTGGACT
CGCTGTGGATCAACCTCCTGAGCAGCCGCATGTCCGCTGCGGTGGAGGCG
GAGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGCCGCGC
CAAGGGCAACAGCGACAACAACGGGAGGAGCGCGATCGCCGCCGCCGCCG
CCCCAGACGGCAGTAGTGCCGGTAGTTCCGGCGGCGGCGATGATAGTGCC
GGTTCTCCTGCGGGCGAACCGGCGTCAGTAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGGAGGAGATGCCACGGTGCTGGGAGGGGAAAAGGCAGGGC
AGGGCGGGGCGGAGGCGGCGAACGGCGGCGGGGGCAACGGTAGCGTTGCG
GTATCGACAGCATTGGCGGGACCAGGGAGGGCCGCGCCGGCGGCGGTGCC
GGCGTCGCCGCGACGGGGGTCCGGCGGCGGCGGGATGGGGGGGGGGTACA
CGTACGAGGACTACGTCGCCTTGGCGACCGGGCTGCAGGCCGGCGCGCCC
GAGAGGCAGAGGGAGGTGGTGCGGGGAGTCTTGCGCTCGGTCTTCCCGGC
GTGGTTCCCGGCGTTCTATCGCATGCTTTTCCCTCCAAGCAAGGTGTGCA
AACAACTAGGAATTTTTTTATTTCTCCAAGCATGGCGTGTGACTGGACCC
CGTGTTGAAAAGTCTAGCGGTTAAGATTTTCCCTCCACACAAGGTGTGTT
TTTCGGCCATGCTTACAAGCAAATGGGAATATTTCTCCTCCAAGTATGAT
ATGTTTCGAGGGCAGGTTGTAAACAACCACACTACTGTAAGAAAATTGTA
TTTGTCATGATATCGAAGCACGGCTGTGCCCGTGCGTAGCGCATGGATTT
GAAAGCATCGTTTTTGGACAGCGAGGACAAGCGAAGTAGAACGAGAAGAG
CGGTGGTTTATGCGATCTGGTAGTTGGTTTGAAGGTGTCGGTGCCACTCT
GTGGTTGCTTTAGTCCGAGGAGGGGGACCACGAGACAAGAGAAAGGAAAA
CACGCCTCGCCTTCGTGTTAAACGAGGAGCTGGAGGGGTCGCACGGTGTC
ACGTCCGGAAAAGTGTGGTGGTGCGTAGGTACTCCAGTCACGGCGTACGC
TGCTCTGGATGGACTTTGGTCAACGCGCATGCCACGCTGATGCCCGTTTT
TTGTTTTTGTGTGTGTGTGTTAGGATTCAGGTGTGTGTGTTGTGTTGTGC
GGTGTGTACCTAGCTGTTGATTCATGACGTTAGCTCCGAAGGGTTCCGCC
GCCACGAGATATGGTGATGGTTGAAGGAGCGGCATGTCATCAGGCAGCAA
TGGCCCTTCGAATGTGTGTGTAAGTCTTGACAGCACGTGTTGTAAATTAC
ATAAATCACGCACGCTCATGATGGCAGATTGACGGGAGACCGTTGTACGA
GACGCGAACACCTCGACACAGGGTAACCCCCCACACACACACGCACGCGC
ATGCAAAACATGAGTACACCACACACACACGACTATCCCCTGACAATCGC
GTGGGTACTGTTCCATGGCCTCCCGCATGCGCACTCGTCCACAGTTTTCT
GCTGAGGTGAACGCGTTCATGTGTCCTCCGCTGTTTGGGTGGCTCGTGGG
AAAGTCGGAGCTCACGGAAGGCGTTGTCGATGTCAAGGTGAGGCAGAGGC
CGGCAGAACGGGAAGAAGAAAGCACCAAACAGGCTTGCCACCCCATCCCC
CGATTATTTCGGAGCGATCATGCGTCGCCCCCTGTGAGACAGCAGGAGGT
GGCGAGGGAGCCGGCGGGTGCGCGAAGTACTTGTCGATCATTCGCATGTA
TGTTTTTTGTTTTTTGGACCGAATACTGCGGAGGGTGTCTTCGTGGTTGT
TGTGTAAGGTCAACTCTTACGTTAGGTCTGCATTTTGTCTGGAACCCACT
GAATCAGGTGGAAATTCACAGGCAAACAGAGAGCAGCTGCGATTTTTTAG
ATTAACCCTCATGGTCGGAAAAGGGAAAACACTGGCTTTGACTCGACCGA
CCACCAAAGACAGACGCTTGACAGACCACCAACTGACGGTTGGTTCCTTT
TGAACCACCACACATATGACTTCACACACACGACAGACATCAACAGCGGC
TATGCCGTTGGATCGCGAGGAAGACATACATACACACACCTACCTCTGCT
CTTTTGTTGAGCAGCAGCAGCACACACATACATCAGGAGCAGACAACAGA
AAAAGCAATTGCACTTGAAAGTGATGAGAGCATGCGATAAGAAGAGCATG
CAGTAGCAGCGATAGAAAAGAAGGGCTTTCTCTTTGTGCCTCTACCAAAT
GCTTTCCATGTACACACAATCCTGTGGCTCGCTCGTAGGCGGCAGTAGTA
GAGGTTGTCGATTGGTGGATGCTGTGTAAATATTCAAGATCCGATCTGTA
TCATCACGGTACATGTATATGGAGAAATCTACCTAAACACCATCGATACA
CGGGTGCACGCGGGTGCGGAGGTTCGGTGCCAACAAACGTGCAGTTGGTG
CCGCGCACGTGCAGCAACGCCTGCACAACGACGTCAAACCCAAGTCCCAG
AAAAAAAATCAAATACGATTTGGCCCTCCAAATCGCAGATGGAAATGCGA
TTCCGGGCTGTATACGATTTGAAATTGCAGATTCCCGGCGAATAACAGCA
CCGTAAGGGTTGGTATGGTCTGTCGACCTCTCTACAAACCCAAATCTCAG
CAACTGCAGACCTTCCATAAGAGTTGGTCTAAGACTGTGTGTCGCACGCC
ACCCGTACTTCGGAGAAGCGAAAACGAGCGACTCACGCATGGTCTAAAGC
ACTCAACACACTCGTTGTCAAAGGGCGTCACTCAAGAATGGGGTAGGCAA
TGGAGAATGGGGGTGACTAAGAACGCGCGACCCCTTTGGCCGCCAGCCCA
ATCTTGACTCGTGGTAGCCCCGGCGCTTCGCATTGCCCCGAGCCTTCTGT
ACATATCCTGCCACGATCGGGAGCCCGCCTCAGATGTTAAGATGTATCTA
CCTCGTCCTCTCCCGGACCTCGTTGTTTCTTACCTCCGTTGATGTATCCT
TCCCGTGAGTGGCACTTGTGCGTACCTTCCCTGCTATTTGAGTTTGTCTT
TGACCGATTCCTATGCCTTCCTCCCCTGTTGAAGTTTTCCCTTGACTGGA
CTCATGCGTACCTCCCTTGTTGAGGTTTTGCCTCGACTGGCAGTTACGCA
TACCTCCCCCTTCAAAAGTGTTCCCCTGACTGACACTTACACATACCTCC
ACTGCTGTTGGAGTTGTTTATCGATGTGTTTTCATCACCGCCGCCACCGC
CGTTGCAGGCGGCCAAGGAAGGGGAGGGTCCTAGGCAGGAGGTTTGGCGG
AACACCGTGAAGGTGGAGCGCTGTCGGTATCTCGAGGCAAGCAAGTGCAA
GGGGACGTGCATGAACCTCTGCAAGCTCCCCACCGAGGCCTTCTTCAGGG
AAGACCTGGGTGAGTAGTCGCGAACCCAGCCAGCCCGGACGTGCGGGGTG
TGTGCGTCCATCGTTCCGAAACAGAGCTTGTCGCGTAAGACAGGAGTGGT
AGTAACAAGCGGCGTGAGGCATCGAAGTGTGTGTGTAGGCATCCTCGCCG
TGCTGCGCTAGGAGTCGGAAGGCGGTGCTTGTGGTCGCGAGACAGGAATG
AACCGTACACGAGGCAGGCGTGCGTGCGTGTGTGTTTCTCTCTCTTTATT
GTTAGCGTCGACCGCGCTCTCCGGCTGACCAATGAACGGACGCTACGTCT
CGGTGCGTGTGTTATTACGTGAGACGACGCCACCTTTGGTTCTGCCGTTG
TCTTAGTAGCCGCAACAACAACAACAGGGCCGTAACTTGATATTTGCGCC
TAGGCTTTGTGCCCTTTACTGAAACAGAGATAGCTGGGGCAGCTCTCCCG
TTGCTCGACTGATGATGATCGCTCGACCGGTCCGCCTCGCCGACGGGGTT
TTGCCAGGTATGCCGTTGCGCATGACCCCGAACTTCGAAGACCTGTCGTG
CGAGTTCGCGTTTGGTCAAGATGCCTTGCCTGCTGAGGAAGACCCCCTGA
TGCGAGAGGTGAGCCAGAGGGAGGACGGGTGGAGAGTATAGAGTGAGAAG
AATAAATGGGCAGCAGAAAGACGGGGGGGGGAAAGCTGGAGGGACGGGGA
AGGTTGGTAGGGGAGACCTCAAGAGAGAGAGAGAGGGAGTTGGTTAGAGA
GGAAGAGATGGAAAGAAAAAATAAAGACAAACGTGAGAGAGAGAAAGTGA
GAGAGAGATAGAGGAGGGACGGATAGAAAAACGAAAGGCATAGGTGTGTG
TTAGAGAGAAAGTTGGAGAGAGAGGGAGAGACGGATATAAAAAACATTGA
CGAACGTGTGAGAGAGAGAGGAGGGACGGATGGAAAAATTGGAGACTAAT
GTTTGTGTGTGAGAGAGAGAACCGGAGATGCTGAAGTCAGAAACAGCGAG
GAGAGAGACAGGAAGAAGTCTTAATCGAGCACGCGTGCTTCCGCGGAACC
CGCGTGTGGCGATTTTTTGCTTGTGTCCTGAAATCCCAGCTTGCTCACTC
TTCTCTGCCCCCTGCCTGCCCCCCCCCCCATCTCCTTCGCTGGACAAAAC
CCCCTTCCAGCCCTGCTGGACGGAGTGCCTCAGCTCGGACAAGCAGCCGA
AAAAGCCCCAGAGAGCTTGCCACACCATGCCGGAGTCCCCCCTCAGGGGA
CCCTAAGGTGAAGTAGCAGCATGTTTCCACAACAACTGTACACCATGTAG
TCAGGGGACTGGCGACAGCAGTCCACAGCCTCCGCGTCTGAAAGGAGTTG
GGGGGCGGGGGTGTAAAGAGGAAGGCGAATTTTGTCAGGGCTCGTCACTC
TCTATAACGCGGGAATCGATTCGTACCTGCGCCGCCACGAGCGGCCCCGG
CGTTTGTATTATTTATTCCTTGGGGTGTAGTTCGTGCTTCGATATCAAAG
AGAGAAAACAACACCGTGAAAGTTGTGTAGTGGCGTTCTAGACAGCGGTT
GGCTGTGGTCTATTGAGGAAGCTACGCTAGTGTAGGGAATAGTGGCCGTA
GGCGAAGTGCGGCAGTGTCGGGACGATGTAAGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5929:513..7747-

>mRNA_Ecto-sp13_S_contig5929.16467.1 ID=mRNA_Ecto-sp13_S_contig5929.16467.1|Name=mRNA_Ecto-sp13_S_contig5929.16467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1680bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5929:513..7747- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCATCATGGCTGATGACGCCGATTCTTCTGATCGCGGCCCAAACGCT
GCCGACACGGGAGGCGTCAGCCGCATGCGTGGAAGCGCGTCAAGCCCAGC
AGCCGGCTTGTGCGTCATCGAGAGCGGGCGCTTGTTCATCGATCCCAACA
GCATTCGTGTGTGGGCTCCCACAAAGAGCAGCGGCTCGAGATAAGAACCG
GGTTGTTGAAGGTGACCACGTGAGCGACCGACTGCGGTGGGGACAGCCGA
AAGGGAGGAGATGTAGGCCAAGGTCGCGGGGGGTGCAAGCAACGATGGAC
GTGGATGGACCGTCGGATGTTGCTGGTGGTGACGGAAAGAGGAGCGTAGT
GGTGAGGGAAGAGGTGCTGCGGCAACAAAAGGAAGGAATAACCGCGGCAA
CCACGGTTGAATTTCCGAACGTTCAAGCGCCAACAAACTTGCCGCAGCCC
GGAGAATGGCTTCAGCAGCAGCAGCAGCAGCAGCTAGGCGGCTTGCCGCC
CGCAGCCGTTGCGCCGCTCAATAGCCGCGTCCCGTCATCCGGGCTTAACG
ACGACGACGACGACAGGAATAGCAGTAAGAGTAAGGTTAAGAAGGCAGAC
CCCTTCGCGGCCCCCGACAACGAGTACACCGACTCCTTCGTGGACTCGCT
GTGGATCAACCTCCTGAGCAGCCGCATGTCCGCTGCGGTGGAGGCGGAGG
CGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGCCGCGCCAAG
GGCAACAGCGACAACAACGGGAGGAGCGCGATCGCCGCCGCCGCCGCCCC
AGACGGCAGTAGTGCCGGTAGTTCCGGCGGCGGCGATGATAGTGCCGGTT
CTCCTGCGGGCGAACCGGCGTCAGTAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGGAGGAGATGCCACGGTGCTGGGAGGGGAAAAGGCAGGGCAGGG
CGGGGCGGAGGCGGCGAACGGCGGCGGGGGCAACGGTAGCGTTGCGGTAT
CGACAGCATTGGCGGGACCAGGGAGGGCCGCGCCGGCGGCGGTGCCGGCG
TCGCCGCGACGGGGGTCCGGCGGCGGCGGGATGGGGGGGGGGTACACGTA
CGAGGACTACGTCGCCTTGGCGACCGGGCTGCAGGCCGGCGCGCCCGAGA
GGCAGAGGGAGGTGGTGCGGGGAGTCTTGCGCTCGGTCTTCCCGGCGTGG
TTCCCGGCGTTCTATCGCATGCTTTTCCCTCCAAGCAAGTTTTCTGCTGA
GGTGAACGCGTTCATGTGTCCTCCGCTGTTTGGGTGGCTCGTGGGAAAGT
CGGAGCTCACGGAAGGCGTTGTCGATGTCAAGGCGGCCAAGGAAGGGGAG
GGTCCTAGGCAGGAGGTTTGGCGGAACACCGTGAAGGTGGAGCGCTGTCG
GTATCTCGAGGCAAGCAAGTGCAAGGGGACGTGCATGAACCTCTGCAAGC
TCCCCACCGAGGCCTTCTTCAGGGAAGACCTGGGTATGCCGTTGCGCATG
ACCCCGAACTTCGAAGACCTGTCGTGCGAGTTCGCGTTTGGTCAAGATGC
CTTGCCTGCTGAGGAAGACCCCCTGATGCGAGAGCCCTGCTGGACGGAGT
GCCTCAGCTCGGACAAGCAGCCGAAAAAGCCCCAGAGAGCTTGCCACACC
ATGCCGGAGTCCCCCCTCAGGGGACCCTAA
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