prot_Ecto-sp13_S_contig59287.16466.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59287.16466.1
Unique Nameprot_Ecto-sp13_S_contig59287.16466.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A6H5JVE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE7_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.480e-43
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQ R
Sbjct:  455 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQFR 539          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: D7FUX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX8_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 4.310e-42
Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            RYIAQGKLE ARSMARRVLTLTLACSGFLATSLLCLSGVIPR FTSDPEVLKRLHQLLPLLA QQPLVALTLVAEGLLVGAGQ R
Sbjct:  232 RYIAQGKLENARSMARRVLTLTLACSGFLATSLLCLSGVIPRCFTSDPEVLKRLHQLLPLLAVQQPLVALTLVAEGLLVGAGQFR 316          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A835YXE7_9STRA (Mate-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.690e-16
Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            RY+ +G+L  AR+MA RV+ LT+A    L  +L    G +P  FT DP +  R+  L+PLLA QQPLVA TL+ EGLLVGA Q R
Sbjct:  289 RYLGRGELRAARAMAARVVALTVASGALLGAALAAARGALPAAFTRDPALAARIGALVPLLALQQPLVAATLLMEGLLVGAQQFR 373          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A6G8Q8A3_9ACTN (MATE family efflux transporter n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8Q8A3_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 7.930e-9
Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            R +  G  + A + ARR++  ++A  G    +LL  +G+IPR FT D EV++R  +L PL A  QP+ A     +G+L+GA   R
Sbjct:  296 RSLGAGDADGAYAAARRMIFWSVAVGGIFCLALLAGTGIIPRAFTGDAEVIERARELWPLFALMQPVGAAVFALDGILIGASDTR 380          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: UPI001E4E03A5 (MATE family efflux transporter n=1 Tax=Brevibacterium sp. CCUG 69071 TaxID=2052937 RepID=UPI001E4E03A5)

HSP 1 Score: 53.1 bits (126), Expect = 5.600e-6
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    3 IAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            +  G  +   ++ RR+    +     +   LL  SG+IPRGF+SDP+V+  L  LLP+LA   P+     V +G+L+GA   R
Sbjct:  291 LGAGNTDAVAAINRRLCLWGIVFGVIVGVILLAGSGIIPRGFSSDPDVITVLAGLLPILALSMPIAGYVFVLDGVLMGAEDAR 373          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A8J4BB24_9CHLO (Protein DETOXIFICATION n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BB24_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 7.960e-6
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            R I  G +  AR +A R+ +L+L     LA  L     ++P  F+SDPEVL+ +  L P++A  QP+  L +  +G+L GAG  R
Sbjct:  496 RDIGAGSVAGARQVASRISSLSLGLGLMLAVGLASSWRLLPGLFSSDPEVLRLVTALFPVVAATQPITVLAMAWDGILYGAGGFR 580          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A8J3T756_9ACTN (Putative DNA-damage-inducible protein F n=1 Tax=Planosporangium mesophilum TaxID=689768 RepID=A0A8J3T756_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 1.040e-5
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    3 IAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVRTM 87
            +  G+ E A+++ARR+  + L      A  +   +GV+P+ FTSDP+V  +  +  P  A   PL  +    +G+L+GAG VR M
Sbjct:  294 LGAGEDEQAKALARRITVIGLVSGAVFAAVIGAGAGVLPKLFTSDPQVFAQAMRAWPWFAGMLPLAGVVFALDGVLIGAGDVRYM 378          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A8J4GU24_9CHLO (Protein DETOXIFICATION n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GU24_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 1.480e-5
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            R I  G +  AR +A RV +L+L     LA +L     ++P  F+SDPEVL+ +  L P++A  QP+  L +  +G+L GAG  R
Sbjct:  484 RDIGAGSVAGAREVAARVSSLSLGLGLVLAGALASGWRLLPGIFSSDPEVLRLVTGLFPVIAAMQPITVLAMAWDGILYGAGGFR 568          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: D8TQI0_VOLCA (Protein DETOXIFICATION n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQI0_VOLCA)

HSP 1 Score: 52.0 bits (123), Expect = 1.500e-5
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVR 85
            R +  G +  AR +A RV +L++     LA  L      +P  F+SDPEVL+ +  L P++A  QP+  L +  +G+L GAG  R
Sbjct:  568 RDLGSGSVSGARMVAGRVGSLSVGLGLLLAGGLAACGAQLPGVFSSDPEVLRLVGALFPVIAATQPITVLAMAWDGILYGAGGFR 652          
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Match: A0A7J7Q836_9CHLO (Protein DETOXIFICATION n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q836_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 2.750e-5
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    1 RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEVLKRLHQLLPLLAFQQPLVALTLVAEGLLVGAG 82
            R  A G+L+ AR +    +TL ++    L   L     ++P  FT D  V +   QL+P++AF QPL AL  V +G+L GAG
Sbjct:  387 RSTAAGELQHARKVVATAITLAVSLGLLLTAILGSTMHLLPELFTQDASVRQLAQQLMPIVAFTQPLNALAFVMDGVLYGAG 468          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59287.16466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JVE7_9PHAE2.480e-4398.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUX8_ECTSI4.310e-4295.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXE7_9STRA3.690e-1651.76Mate-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6G8Q8A3_9ACTN7.930e-937.65MATE family efflux transporter n=1 Tax=Rubrobacter... [more]
UPI001E4E03A55.600e-634.94MATE family efflux transporter n=1 Tax=Brevibacter... [more]
A0A8J4BB24_9CHLO7.960e-637.65Protein DETOXIFICATION n=1 Tax=Volvox africanus Ta... [more]
A0A8J3T756_9ACTN1.040e-534.12Putative DNA-damage-inducible protein F n=1 Tax=Pl... [more]
A0A8J4GU24_9CHLO1.480e-538.82Protein DETOXIFICATION n=2 Tax=Volvox reticuliferu... [more]
D8TQI0_VOLCA1.500e-536.47Protein DETOXIFICATION n=1 Tax=Volvox carteri f. n... [more]
A0A7J7Q836_9CHLO2.750e-537.80Protein DETOXIFICATION n=1 Tax=Scenedesmus sp. NRE... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002528Multi antimicrobial extrusion proteinPFAMPF01554MatEcoord: 2..94
e-value: 2.3E-12
score: 46.9
NoneNo IPR availablePANTHERPTHR42893FAMILY NOT NAMEDcoord: 2..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59287contigEcto-sp13_S_contig59287:510..806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59287.16466.1mRNA_Ecto-sp13_S_contig59287.16466.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59287 510..806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59287.16466.1 ID=prot_Ecto-sp13_S_contig59287.16466.1|Name=mRNA_Ecto-sp13_S_contig59287.16466.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
RYIAQGKLETARSMARRVLTLTLACSGFLATSLLCLSGVIPRGFTSDPEV
LKRLHQLLPLLAFQQPLVALTLVAEGLLVGAGQVRTMMLWGVILSCLFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE_fam