mRNA_Ecto-sp13_S_contig5927.16462.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: D8LH21_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH21_ECTSI) HSP 1 Score: 983 bits (2542), Expect = 0.000e+0 Identity = 586/599 (97.83%), Postives = 588/599 (98.16%), Query Frame = 1
Query: 1 GSKYVPPHLRGGGGEEGPSPAAVQPAGIPGGPGGPVPVQGAPQPTGAWAPRPGAGGYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNWDRGDSRPAPRNSRWNDGXXXXXXXXXXXVNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG 1797
GSKYVPPHLRGGGGEEGP PA VQPAGIPGGPGGPVPVQGAPQPTGAWAPRPGAGGYQG XXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R WDRGD RPAPRNSRWNDGXXXXXXXXXXX+NAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISL+CIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG
Sbjct: 4 GSKYVPPHLRGGGGEEGPGPAVVQPAGIPGGPGGPVPVQGAPQPTGAWAPRPGAGGYQGGXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RKWDRGDFRPAPRNSRWNDGXXXXXXXXXXXINAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG 600
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A6H5JCH1_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH1_9PHAE) HSP 1 Score: 938 bits (2424), Expect = 0.000e+0 Identity = 585/680 (86.03%), Postives = 587/680 (86.32%), Query Frame = 1
Query: 1 GSKYVPPHLRGGGGEEGPSPAAVQPAGIPGGPGGPVPVQGAPQPTGAWAPRPGAGGYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNWD---------------------------------------------------------------------------------RGDSRPAPRNSRWNDGXXXXXXXXXXXVNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG 1797
GSKYVPPHLRGGGGEEGP PAAVQPAGIPGGPGG VPVQGAPQPTGAWAPRPG GGYQG XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GDSRPAPRNSRWND XXXXXXXXXXXVNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISL+CIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG
Sbjct: 4 GSKYVPPHLRGGGGEEGPGPAAVQPAGIPGGPGGXVPVQGAPQPTGAWAPRPGTGGYQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXRKGDSRPAPRNSRWNDXXXXXXXXXXXXVNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYG 683
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A835ZB12_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB12_9STRA) HSP 1 Score: 684 bits (1764), Expect = 8.910e-240 Identity = 338/449 (75.28%), Postives = 388/449 (86.41%), Query Frame = 1
Query: 466 VNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRK---SYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGGG 1803
VN+KGFHGN D R+E++LF+ H GINF +YDDIPVETSGENVPEPI++F D+LG +LMR T LCGYTKPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLISLLR GGP+YP+DG R+ +YPVALVLAPTRELASQIYDEARRFCY TG+APVVIYGGA+ RSQ R+L+RGCDLLVATPGRLVD +ERG++SL CI+FLVLDEADRMLDMGFEPQIRRIV++EDM+ +RQTFMFSATFPREIQ+LA+DFM DYIFLAVGRVGSASKDV QT+EY + +QK L+RTL+ L+ TGLVLVFTETKR ADYLE+QL + PA+SIHGDK+QRERE+AL+ FK+G +PILVATDVAARGLDI+NVTQV+NYDLPTNIDDYVHRIGR ALSFMNE+NRN+AREL+++L EN Q P WL+SMA YGGG
Sbjct: 79 VNSKGFHGNERPDPRVERELFSKEGHQQTGINFSKYDDIPVETSGENVPEPIETFPPDVLGPELMRCTELCGYTKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPEYPDDGGRRQRTTYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARSQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIKFLVLDEADRMLDMGFEPQIRRIVQQEDMSL--DRQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTIEYCENDQKLEALMRTLSKLDGTGLVLVFTETKRGADYLEHQLRMRSLPAASIHGDKSQREREEALKHFKSGKSPILVATDVAARGLDISNVTQVVNYDLPTNIDDYVHRIGRTGRVGNIGHALSFMNERNRNIARELHDLLTENDQVVPAWLSSMASYGGG 525
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A836CEH0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH0_9STRA) HSP 1 Score: 675 bits (1742), Expect = 2.770e-232 Identity = 350/510 (68.63%), Postives = 391/510 (76.67%), Query Frame = 1
Query: 403 APRNSRWND-----------GXXXXXXXXXXXVNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQ-----------------------------YPNDGRRKS---YPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGGG 1803
AP NSRW D G VN+KGFHG+ D RLE++LF H GINF +YDDIPVETSGENVPEPI++F ++LG +LMR+T LCGY KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLISLLR GGPQ YP DG R+ YPVALVLAPTRELASQIYDEARRFCY TG+APVVIYGGA+ R+Q R+L+RGCDLLVATPGRLVD +ERG++SL CI+FLVLDEADRMLDMGFEPQIRRIVE+EDM R RQTFMFSATFPREIQ+LA+DFM DYIFLAVGRVGSASKDV QTVEY + +QK L+RTLNN + TGL+L+FTETKR DYLE+QL QG PA+SIHGDKTQRERE+AL+ FK G TPILVATDVAARGLDI+NVTQV+NYDLPTNIDDYVHRIGR ALSFMNE+NRN+AREL+++L EN Q P WLASMA YGGG
Sbjct: 2 APTNSRWTDRGESRGGGGDYGGRGGGGYGAPRVNSKGFHGDEKGDPRLERELFQKEGHQQTGINFSKYDDIPVETSGENVPEPIETFPPEILGPELMRSTELCGYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPQKQKCLNVPIRSQRSFNNQLPLIAAASAAQYPEDGGRRQRSVYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARTQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIRFLVLDEADRMLDMGFEPQIRRIVEQEDMART--RQTFMFSATFPREIQRLASDFMKDYIFLAVGRVGSASKDVIQTVEYCENDQKMDSLMRTLNNCD-TGLILIFTETKRGCDYLEHQLRMQGLPAASIHGDKTQREREEALKYFKNGQTPILVATDVAARGLDISNVTQVVNYDLPTNIDDYVHRIGRTGRVGNIGHALSFMNERNRNIARELHDLLTENDQVVPAWLASMASYGGG 508
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A7S3XUS5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS5_HETAK) HSP 1 Score: 648 bits (1671), Expect = 6.690e-228 Identity = 327/447 (73.15%), Postives = 375/447 (83.89%), Query Frame = 1
Query: 466 VNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDG--RRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGG 1800
VNA GFHG M D RLE QLF +H + GINFD+YDDIPVE SGENVP I++F ++++GE LM T LC Y KPTPVQ+YSIPIG +RDLMACAQTGSGKTAGFLFP LIS+L +G P P +G R+++P ALVLAPTRELASQIYDEA+RFCY TGIAPVVIYGGADVR+Q RELERGCDLLVATPGRLVDL+ERGR+SL+C+ FL+LDEADRMLDMGFEPQIRRIVE+EDM R ERQTFMFSATFPREIQ+LAADFM +Y+FL VGRVGSASKDVTQ VEYV++++K L+R L +E GL+LVF ETKR+AD++E+ L +G+PA+SIHGDKTQRERE AL FK G PILVATDVAARGLDI+NVTQVIN+DLPTNIDDYVHRIGR XXX AL+FMNEKNRN+AR+LY+ML EN QE PQWL SM YGG
Sbjct: 20 VNAIGFHGRMEADKRLESQLFEQKDHQTAGINFDKYDDIPVEVSGENVPPHIETFSVEVIGERLMANTVLCQYNKPTPVQRYSIPIGKESRDLMACAQTGSGKTAGFLFPVLISMLTKGPPAPPEEGGYARRTHPNALVLAPTRELASQIYDEAKRFCYATGIAPVVIYGGADVRNQLRELERGCDLLVATPGRLVDLIERGRVSLACVNFLILDEADRMLDMGFEPQIRRIVEQEDMPR--ERQTFMFSATFPREIQRLAADFMRNYVFLTVGRVGSASKDVTQRVEYVEEHEKLDHLMRFLQGVEE-GLILVFVETKRSADHIEHMLYKEGFPAASIHGDKTQREREGALANFKNGRCPILVATDVAARGLDISNVTQVINFDLPTNIDDYVHRIGRTGXXXNVGNALAFMNEKNRNIARDLYDMLSENDQEVPQWLGSMVSYGG 463
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A7S2V445_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V445_9STRA) HSP 1 Score: 631 bits (1627), Expect = 1.990e-221 Identity = 327/449 (72.83%), Postives = 373/449 (83.07%), Query Frame = 1
Query: 466 VNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDG--RRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGGGG 1806
+N+KGFHG D RLE++LF E + GINFD+Y DIPVE SG+N P+P+ F +++GE LMR T LC Y KPTPVQ+YSIPIG RDLMACAQTGSGKTAGFLFP L S++ G P G RRK++PVALVLAPTRELASQI++EARRFCY TG+APVV+YGGADVR Q R+LERGCDLLVATPGRLVDL+ERGR+SL I+FLVLDEADRMLDMGFEPQIRRIVE+EDMTR ERQTFMFSATFPREIQ+LAADFM DYIFL VGRVGSASKDV Q VEYVD+ K L+R L + + GL+LVF ETKR+ D++E L +G+PA+SIHGDK+QRERE AL+ FK G PILVATDVAARGLDI+NVT V+NYDLPTNIDDYVHRIGRXXXXXXXXXALSF+NEKNRNVARELYE+L EN E PQWL+SMA +GGGG
Sbjct: 14 LNSKGFHGEETPDPRLERELFERPEQQTAGINFDKYFDIPVEVSGDNAPDPVSEFTPELVGEQLMRNTVLCNYNKPTPVQRYSIPIGAQGRDLMACAQTGSGKTAGFLFPVLTSMITNGAPPQQGQGGYRRKTFPVALVLAPTRELASQIFNEARRFCYCTGVAPVVVYGGADVRVQLRDLERGCDLLVATPGRLVDLMERGRVSLLNIRFLVLDEADRMLDMGFEPQIRRIVEQEDMTR--ERQTFMFSATFPREIQRLAADFMKDYIFLTVGRVGSASKDVLQKVEYVDERDKLDSLMRFLQTV-SEGLILVFVETKRSCDHIEDMLLREGFPAASIHGDKSQREREFALKNFKNGRCPILVATDVAARGLDISNVTNVVNYDLPTNIDDYVHRIGRXXXXXXXXXALSFVNEKNRNVARELYELLAENGHETPQWLSSMASFGGGG 459
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A7S2AA77_TRICV (RNA helicase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AA77_TRICV) HSP 1 Score: 616 bits (1589), Expect = 2.310e-215 Identity = 305/444 (68.69%), Postives = 361/444 (81.31%), Query Frame = 1
Query: 469 NAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGG 1800
N +GFHG+M D RLEKQLF + + + GINFD+YDDIPVETSG +VPEPI+ + + +GEDLMR LCGY+KPTPVQKYS+PIG +NRDLMACAQTGSGKTAGFLFP L+S+++ GG + + GRR+SYP AL+LAPTRELASQI++EA+RF YRTGIA VV+YGGA+VR Q R++ERGCDLLVATPGRLVDL+ERGR+S+ I+FLVLDEADRMLDMGFEPQIRRIVE+E M +RQT MFSATFP +IQ+LA DFM DYIFL VGRVGSASKD++QTVEYV+ N K L+R L +E GL+L+F ETKR+ADYLE L +G+PA SIHGDK QRERE+AL FK TP++VATDVA+RGLDI NVTQV+N+DLPTNIDDYVHRIGR ALSF+NEKN VAREL E+L EN QE P WL M+ YGG
Sbjct: 26 NERGFHGDMKPDPRLEKQLFQSEDRQTTGINFDKYDDIPVETSGADVPEPIEVYTEETIGEDLMRNVQLCGYSKPTPVQKYSVPIGTANRDLMACAQTGSGKTAGFLFPVLMSMIKNGGSEPLDHGRRRSYPEALLLAPTRELASQIHEEAKRFTYRTGIASVVVYGGAEVREQLRQIERGCDLLVATPGRLVDLIERGRVSMENIKFLVLDEADRMLDMGFEPQIRRIVEQEGMPHSEDRQTMMFSATFPTQIQRLAGDFMRDYIFLTVGRVGSASKDISQTVEYVENNAKVETLMRFLLTIEE-GLILIFVETKRSADYLEDVLCAKGFPACSIHGDKGQREREEALWSFKNARTPVMVATDVASRGLDIPNVTQVVNFDLPTNIDDYVHRIGRTGRAGNTGAALSFVNEKNAGVARELRELLEENDQEIPAWLNQMSHYGG 468
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: W7TYZ7_9STRA (RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYZ7_9STRA) HSP 1 Score: 619 bits (1595), Expect = 1.090e-213 Identity = 316/448 (70.54%), Postives = 371/448 (82.81%), Query Frame = 1
Query: 466 VNAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGR---RKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGG 1800
VN++GFHG++ D RLE+QLF + GINFD+YDDIPVETSGE PEPI SF DM+G LM LC Y+KPTPVQKYS+PIG+++RDLMACAQTGSGKTAGFLFPT++S+LR+G P+ P GR RK YP+ALVLAPTRELASQI+DEA++FCY TG+ PVVIYGGA+VR+Q RELERGCDLLVATPGRLVDL+ER RISL I+FL+LDEADRMLDMGFEPQIRRIVE+E M +RQTFMFSATFPR+IQ+LAADFM DYIFLAVGRVGSASKDV Q +EYV+ + K L+ L+ + +GL+L+F E KR+ADYLE L QG+P +SIHGDKTQRERE+AL FKTG P+LVATDVAARGLDI+NVTQVINYDLP NIDDYVHRIGR XXXXXXX ALS MNEKN+N+AREL+++L EN + P++L MA GG
Sbjct: 157 VNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPT--DRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTXXXXXXXHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGG 602
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A7S4JC38_9STRA (RNA helicase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JC38_9STRA) HSP 1 Score: 613 bits (1582), Expect = 2.250e-213 Identity = 299/444 (67.34%), Postives = 358/444 (80.63%), Query Frame = 1
Query: 475 KGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMAMYGGGG 1806
+GFHG+M D RLE+QLFNT GINFD YD+IPVETSG P+PID + D +GEDLMR T LCGY+KPTPVQKYS+PIG + RD+MACAQTGSGKTAGFLFP ++++L+ GG + P+ ++ YP AL+LAPTRELASQI++EARRF Y TGIA VVIYGGADVR Q R++ERGCDLLVATPGRLVDL+ERGRIS+ C++FLVLDEADRMLDMGFEPQIRRIVE+E M G+RQT MFSATFP++IQ+LA DFM +YIF+ VGRVGSASKDVTQTVEYV+ N K L+R L +E GL+L+F ETKR+ADYLE L +G+PA SIHGDK+QRERE+AL FK G TP+++ TDVA+RGLDI NVTQV+N+DLP++IDDYVHRIGR ALSF+NE+N +AR+L +ML EN QE P WL M YGGGG
Sbjct: 52 RGFHGDMRPDPRLERQLFNTEGRQKTGINFDNYDNIPVETSGAECPDPIDDYTSDTIGEDLMRNTQLCGYSKPTPVQKYSVPIGTAGRDMMACAQTGSGKTAGFLFPVIMTMLQNGGSEPPDSRGKRGYPEALLLAPTRELASQIHEEARRFTYCTGIATVVIYGGADVREQLRQIERGCDLLVATPGRLVDLIERGRISMECVKFLVLDEADRMLDMGFEPQIRRIVEQEGMPYDGDRQTMMFSATFPQQIQRLAGDFMREYIFITVGRVGSASKDVTQTVEYVENNDKVETLMRFLLTIE-DGLILIFVETKRSADYLEDVLCGKGFPACSIHGDKSQREREEALSSFKHGRTPVMIGTDVASRGLDIPNVTQVVNFDLPSSIDDYVHRIGRTGRAGNTGAALSFINERNSGIARDLRDMLQENDQEVPNWLNQMGSYGGGG 494
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Match: A0A7S1TZT5_9STRA (RNA helicase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZT5_9STRA) HSP 1 Score: 610 bits (1574), Expect = 7.450e-213 Identity = 315/450 (70.00%), Postives = 369/450 (82.00%), Query Frame = 1
Query: 469 NAKGFHGNMNEDLRLEKQLFNTTEHASQGINFDRYDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRR--KSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLSCIQFLVLDEADRMLDMGFEPQIRRIVEEEDMTRVGERQTFMFSATFPREIQQLAADFMTDYIFLAVGRVGSASKDVTQTVEYVDQNQKFPMLLRTLNNLEATGLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQVINYDLPTNIDDYVHRIGRXXXXXXXXXALSFMNEKNRNVARELYEMLGENQQECPQWLASMA--MYGGGG 1806
N +GFHG++ ED RLE QLF + + GINFD+YDDIPVE SG+N PE I+ F + +GEDLMR T L Y KPTPVQKYSIPIG + RDLMACAQTGSGKTAGFLFP + S+++ G P+ P G R K PVAL+L+PTREL SQIY+EA+RFCYRTGI PVVIYGG+D ++Q + +RGCDLLVATPGRLVD++ERGR+SL+ +FLVLDEADRMLDMGFEPQIRRIVEEEDM ERQTFMFSATFPREIQQLA DFM DYIFL VGRVGSASKDVTQ VE+V+ K +L+ L+ + A GL+LVF ETKR+AD +E+ L G+PA+SIHGD++QRERE AL+ FK+G TPILVATDVAARGLDIN VTQVINYD+P NIDDYVHRIGRXXXXXXXXXALSFMN++NRN+ARE+Y++L EN QE PQWL SMA +GG G
Sbjct: 27 NERGFHGSLKEDPRLEAQLFQKADQQTAGINFDKYDDIPVEVSGDNAPEHIEVFTAEAIGEDLMRNTQLANYRKPTPVQKYSIPIGQAGRDLMACAQTGSGKTAGFLFPVISSMMKNGVPEGPPPGGRRYKPSPVALILSPTRELTSQIYEEAKRFCYRTGIRPVVIYGGSDFKAQTSDCDRGCDLLVATPGRLVDMIERGRMSLAACRFLVLDEADRMLDMGFEPQIRRIVEEEDMPHCAERQTFMFSATFPREIQQLAGDFMQDYIFLTVGRVGSASKDVTQKVEWVESRDKDRVLIDFLHTI-ADGLILVFVETKRSADEIEHYLCQSGFPATSIHGDRSQREREYALKTFKSGETPILVATDVAARGLDINGVTQVINYDMPNNIDDYVHRIGRXXXXXXXXXALSFMNDRNRNIAREVYDLLSENDQEVPQWLQSMAGSAFGGRG 475 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5927.16462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5927.16462.1 >prot_Ecto-sp13_S_contig5927.16462.1 ID=prot_Ecto-sp13_S_contig5927.16462.1|Name=mRNA_Ecto-sp13_S_contig5927.16462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp GSKYVPPHLRGGGGEEGPSPAAVQPAGIPGGPGGPVPVQGAPQPTGAWAPback to top mRNA from alignment at Ecto-sp13_S_contig5927:1144..8699+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5927.16462.1 ID=mRNA_Ecto-sp13_S_contig5927.16462.1|Name=mRNA_Ecto-sp13_S_contig5927.16462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7556bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5927:1144..8699+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5927:1144..8699+ >mRNA_Ecto-sp13_S_contig5927.16462.1 ID=mRNA_Ecto-sp13_S_contig5927.16462.1|Name=mRNA_Ecto-sp13_S_contig5927.16462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5927:1144..8699+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |