prot_Ecto-sp13_S_contig5923.16456.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5923.16456.1
Unique Nameprot_Ecto-sp13_S_contig5923.16456.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length283
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5923.16456.1 vs. uniprot
Match: D7FJC9_ECTSI (6PF2K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC9_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.040e-59
Identity = 136/172 (79.07%), Postives = 140/172 (81.40%), Query Frame = 0 
Query:  114 MNERNLFRMTDSLADRTFSFAPAETPPVSPSXXXXXXXXXXXXXXRIFEKKVRSVSDSFGPQ--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKKAISQRQFFRPVSMSSSVFKESPIPDILRRRLAGQVRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM 283
            M+E NLFRMTDSLADRTFSFAPAETPP+SPSXXXXXXXXXXXXXX  FE+KVRSVSDSFGPQ       XXX                     GPKKAISQRQFFRPVSMSSSVF ESPIPDILRRRLAG+VRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM
Sbjct:    1 MSEPNLFRMTDSLADRTFSFAPAETPPLSPSXXXXXXXXXXXXXXG-FERKVRSVSDSFGPQLSAGKGSXXXSYRGGDGGDGDPAAAVQMPLPGPKKAISQRQFFRPVSMSSSVFNESPIPDILRRRLAGEVRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5923.16456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJC9_ECTSI8.040e-5979.076PF2K domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.641

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5923contigEcto-sp13_S_contig5923:10..3819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5923.16456.1mRNA_Ecto-sp13_S_contig5923.16456.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5923 10..3819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5923.16456.1 ID=prot_Ecto-sp13_S_contig5923.16456.1|Name=mRNA_Ecto-sp13_S_contig5923.16456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
QSLSLFGTLHFLVSLLPVIFYTGGRDVLRMENDDTFAPRPGTKSTWTHVK
VCGTKASYFRKQRREWHTADSSGNETGDAVAADAAGAVHDPYGEESGSST
HGCLGGTDASNSSMNERNLFRMTDSLADRTFSFAPAETPPVSPSPAGRGG
GGGGGGSGRIFEKKVRSVSDSFGPQPSAGKGSGGGSFEGGGDGDASAAVQ
MPLPGPKKAISQRQFFRPVSMSSSVFKESPIPDILRRRLAGQVRHGLSQA
EFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM
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