mRNA_Ecto-sp13_S_contig5923.16456.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5923.16456.1
Unique NamemRNA_Ecto-sp13_S_contig5923.16456.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5923.16456.1 vs. uniprot
Match: D7FJC9_ECTSI (6PF2K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC9_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.040e-59
Identity = 136/172 (79.07%), Postives = 140/172 (81.40%), Query Frame = 1 
Query:  340 MNERNLFRMTDSLADRTFSFAPAETPPVSPSXXXXXXXXXXXXXXRIFEKKVRSVSDSFGPQ--PXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKKAISQRQFFRPVSMSSSVFKESPIPDILRRRLAGQVRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM 849
            M+E NLFRMTDSLADRTFSFAPAETPP+SPSXXXXXXXXXXXXXX  FE+KVRSVSDSFGPQ       XXX                     GPKKAISQRQFFRPVSMSSSVF ESPIPDILRRRLAG+VRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM
Sbjct:    1 MSEPNLFRMTDSLADRTFSFAPAETPPLSPSXXXXXXXXXXXXXXG-FERKVRSVSDSFGPQLSAGKGSXXXSYRGGDGGDGDPAAAVQMPLPGPKKAISQRQFFRPVSMSSSVFNESPIPDILRRRLAGEVRHGLSQAEFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5923.16456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJC9_ECTSI8.040e-5979.076PF2K domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5923contigEcto-sp13_S_contig5923:10..3819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score208.0
Seed ortholog evalue5.8e-51
Seed eggNOG ortholog2880.D7FJC9
Preferred namePFKFB3
Model size849
KEGG rclassRC00152
KEGG koko:K01103,ko:K19028,ko:K19029,ko:K19030
KEGG ReactionR02731
KEGG Pathwayko00051,ko04066,ko04152,ko04919,ko04922,map00051,map04066,map04152,map04919,map04922
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0003873,GO:0004331,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006003,GO:0006006,GO:0006007,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010562,GO:0010563,GO:0010646,GO:0010647,GO:0010675,GO:0010676,GO:0010677,GO:0010817,GO:0010906,GO:0014070,GO:0014074,GO:0016051,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019203,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023056,GO:0030554,GO:0030808,GO:0030809,GO:0030810,GO:0030811,GO:0030812,GO:0030813,GO:0031099,GO:0031100,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031667,GO:0031960,GO:0031974,GO:0031981,GO:0032024,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032868,GO:0032879,GO:0032880,GO:0032991,GO:0033131,GO:0033133,GO:0033674,GO:0033762,GO:0033993,GO:0034284,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042594,GO:0042802,GO:0042866,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0043467,GO:0043470,GO:0043540,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045820,GO:0045821,GO:0045912,GO:0045913,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045980,GO:0045981,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046683,GO:0046700,GO:0046835,GO:0046883,GO:0046887,GO:0046939,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0050308,GO:0050708,GO:0050714,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051194,GO:0051195,GO:0051196,GO:0051197,GO:0051198,GO:0051222,GO:0051223,GO:0051338,GO:0051347,GO:0051384,GO:0051591,GO:0055086,GO:0060322,GO:0061695,GO:0062012,GO:0062013,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070095,GO:0070201,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0090407,GO:0097159,GO:0097367,GO:1900371,GO:1900372,GO:1900373,GO:1900542,GO:1900543,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1903299,GO:1903301,GO:1903530,GO:1903532,GO:1903578,GO:1903579,GO:1903580,GO:1904951,GO:1990234,GO:2001169,GO:2001170,GO:2001171
Exons4
EggNOG free text desc.6phosphofructo2kinase
EggNOG OGsCOG0406@1,KOG0234@2759
EC2.7.1.105,3.1.3.46
Cds size849
COG Functional cat.G
BiGG ReactioniMM904.YJL155C,iND750.YJL155C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463823.1747687-CDS-Ecto-sp13_S_contig5923:9..1721681463823.1747687-CDS-Ecto-sp13_S_contig5923:9..172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5923 10..172 -
1681463823.1866052-CDS-Ecto-sp13_S_contig5923:710..10711681463823.1866052-CDS-Ecto-sp13_S_contig5923:710..1071Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5923 711..1071 -
1681463823.1953235-CDS-Ecto-sp13_S_contig5923:1829..19621681463823.1953235-CDS-Ecto-sp13_S_contig5923:1829..1962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5923 1830..1962 -
1681463823.2040358-CDS-Ecto-sp13_S_contig5923:3627..38191681463823.2040358-CDS-Ecto-sp13_S_contig5923:3627..3819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5923 3628..3819 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5923.16456.1prot_Ecto-sp13_S_contig5923.16456.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5923 10..3819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5923.16456.1

>prot_Ecto-sp13_S_contig5923.16456.1 ID=prot_Ecto-sp13_S_contig5923.16456.1|Name=mRNA_Ecto-sp13_S_contig5923.16456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
QSLSLFGTLHFLVSLLPVIFYTGGRDVLRMENDDTFAPRPGTKSTWTHVK
VCGTKASYFRKQRREWHTADSSGNETGDAVAADAAGAVHDPYGEESGSST
HGCLGGTDASNSSMNERNLFRMTDSLADRTFSFAPAETPPVSPSPAGRGG
GGGGGGSGRIFEKKVRSVSDSFGPQPSAGKGSGGGSFEGGGDGDASAAVQ
MPLPGPKKAISQRQFFRPVSMSSSVFKESPIPDILRRRLAGQVRHGLSQA
EFAVRRDGKLLLATVGLPARGKTYIAQSIKRHM
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mRNA from alignment at Ecto-sp13_S_contig5923:10..3819-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5923.16456.1 ID=mRNA_Ecto-sp13_S_contig5923.16456.1|Name=mRNA_Ecto-sp13_S_contig5923.16456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5923:10..3819- (Ectocarpus species13 EcNAP12_S_4_19m)
CAATCGCTTTCCCTCTTCGGCACTCTCCACTTCTTAGTCTCTCTGCTTCC
AGTGATATTCTACACAGGAGGGCGAGACGTGCTTCGCATGGAGAATGACG
ACACGTTTGCACCACGGCCGGGGACCAAGAGCACGTGGACGCATGTGAAA
GTCTGCGGCACGAAGGCGAGTTATTTCAGAAAACAGCGGCGTGTTTCTTT
GACCTTGTAGCGCAGAAGCACAGCAGTATAGAGGCATAGCGATCAACTGG
CATAGTTATGTGCAAGCACGCCAGCAGCACCCGCGGTCAAGGCTGCTCGT
CTATTGCGATGGGAGCAGAGATGCGCTTTGGTAGCGGTAGCGGTATAACG
GCAGCAAATCGATCTATCAACTTTTAACATTTGCTCCCCACGGCGGCGAT
CGTTAGATCGCTCTACATACGTCCCACAGCATCAACAAACCGGGGCGTTG
TCGTGTTTTTCGTCACCTCTGAACCAGCCCTACGAGACTTCCGAGAATCG
GCGAACCTCCCACTCCCACTCGACAGGAGCTGCACTTGCAGTTCTAGCCC
TGGTATAAAAGAACGACTGGCCCAGTAGTCACCGTTCGACAGAGTCTGAT
GATATGTGATATCAAGGAATGCTACAAACCGCTCCTGAGCAGAGGGCGAA
CTGGCTTTTATGCATCCCACAGCAGCAGAAACGTGATGCGGTGACGTTGC
ACCCCTTGTTCGAGCAGCACTGTGTCCGTGCGTTTAAAAGCCGGCAATTA
GAATGAAATATCGTCTGTTGGCATGCGAATATATGCACCGCCTATGCATA
CGAAAGACAAGGAAGGATGAGTTCGATGTGCTGTCTGGGCTCGTCTGTTT
GGCTGGCATGCCGCCATGACGCCGTGACCTTGCGGCAGCGTAAGCCAACC
TCAAAAACTCGATCTAAATTCGAAGGCCCGCGTGCATGGGCATCGCGGGC
CATATGCGTGCAACGACAACTATTCACCATCCTCGGTACTGCTGTAGCGG
TATATTCTTCGGTGCGGCAGGGACATTAAAAACTAGGTTGCTCACCCCAG
ACTGCTGTAGCGCTATATTCTTCGCGGCGGTGGGGGGATCAGGGACCAAG
TTACCCACCCTGATTCCGATACCTACGATGCACGGAGCACCCACACCTGT
GATCTTTACTATATGAAGTACTCAAGTACTTAGTGCCAAACATGAGTGTA
ACAACCGTCGTCCACAATATCTTCTACCCTACGGCCTCGCCTCTTTAACT
GAAGAGTTCCGATCCGGGGTCACACGAAATATATCCTCTGGGTTGTTGGG
TAGCTTAATTACTCGAGCCCGAGAACGCGTGTCGTGTGCATAATTCCCAA
ACCGAGTTGGTTTTGGAGCGATGAAGCTTCGATATCACAACTACTGCTTC
TGCGCTCACACCTGTACAGCAAATCAGGTGTAGTTGGCTTTGACACCGTC
CAACAGCTTGGAGTGGAGATGCGTTTGTGTAGTGGTCAATGCCGACGCGT
TCGACACTCAAGGCAAGCAAGAATAAGTGAGCACCCCTTCGCCTGCTTAG
TTGGCAACACCCCGAAGTGGATGGTCCCTATCCGACCTTGGTTTACGGCG
CGAGGAGTCTACGGCGATGTTGCTTGCCCCCTCAGCAAACTGTGCGTGGT
AGTTAGAACGACCCCCTTTCACCTTCGGCCTTTCCGCAATTGATACGTGG
CGCTCTCACGCCCGTTTTCATCTCACCAAGCTAGCGGAAGGGGACAAATT
TCCCATCCAACCTGAGTCTTCTTCTATGGAACGCCATTCACGAGTAATAT
ATAGCCTCCCATACATGTCTGCGATCACGAAATCGCCGCAACCGCCGATA
CCCGCAGGAATGGCACACGGCCGACTCTTCGGGCAACGAGACCGGGGATG
CTGTTGCCGCTGATGCTGCCGGGGCGGTTCATGATCCGTACGGGGAGGAA
TCCGGATCGTCTACTCACGGATGCCTGGGCGGAACCGACGGTACGGTGCG
GAATCCGATATTAACCCGTTCCGCAAGGTTGTGTGATTTTGTGATGCCTG
CCCATGCGACCGCAACCCTTGCGGAATGGTGAACGTGGCGGGGTCCCCAC
CACTGCGTAAATAAACGTCTGCCGTTTGTGGACCGATCGCCAGGAAGTAA
AATTCGCATTTGGTGTGTTCTTTGCATGAGATAAGCGTCCGTGAGAGACG
GCGAATAAGGCCCAGAAGCAACAAACGCCACGGAACTGCCGACGACGGTC
TCACTCCCCCCCCCCGCATAGCTGCACAGCCATACCTGCGACGATGGCTT
TTGTCGTAGCGGAACAAGTGGACGCGAAAGCGGCCTGCTGCCTTCCCCCC
CCGGCCTCCCTCGTTCTTGTTTAACGACGCACCGACTTGATAGCGGGGTT
GAACAGATAAGAACACGAAGAGTCAGTCCTCCATCCCCGTCACTTCGTAC
ACACGCGGAAGAAAACCGTGAAGTTGCGGGGCGTTGGTATATAAAGGTGG
CGAGATCCCGCCTGCTCGACAACAGATCAAGTCAACACACGTTTCCCGAT
CCGATGTCCTCTCTTACCTTCGTTCCCACTCCGCCCTTTCCCCTGCTCGA
CGACGTCGTAAACCGTCCCGCTGTGTTCATCACCCTCACCATCACTATCA
TCAACGTCGCCACCACGACCATCACCATCATCGACAACGACACCATCGCA
AACAACGGCACGGCCGTCATCAACACCAACGAACAAACAACCAACCAGCG
TCGAACAGCAGCATGAACGAGCGGAACCTCTTCCGGATGACCGACTCCCT
CGCGGACAGGACCTTCTCCTTCGCGCCGGCGGAGACCCCTCCCGTCTCGC
CTTCCCCCGCGGGCAGGGGCGGCGGCGGCGGCGGCGGCGGCTCCGGCCGC
ATCTTCGAGAAAAAGGTTAGGTCGGTGTCGGACTCGTTCGGGCCGCAGCC
TTCAGCGGGGAAGGGGTCAGGAGGAGGAAGTTTTGAAGGCGGCGGCGACG
GGGATGCGTCGGCGGCGGTACAGATGCCGCTGCCTGGGCCCAAGAAGGCC
ATCAGCCAGAGGCAGTTCTTCCGGCCCGTTTCGATGTCGTCGTCGGTGTT
CAAAGAGAGGTGATGGCACTGCTCTATGAGGAATGTGGCGGGCGTAGATA
TGTGCACACGCTTGTTGTTGTTGTCTCCACATTTAAACACCGTTCCGTTC
TCTATACTTGTACCCAGCACCTTCTGCTGTCCGTAACTGTCAAAAACTTG
ACGCGGTGGATTCCCGTGGTCACAGGCGTACGGCAGTTTTTTTTTGCTCA
CGTGGCTATCTCGTCGCTTTTGCCTCTCGAACCGGTCGCAGTCGATGCCA
CTCAATTACACACGCGGACTCGCTTTCCCGTGCAGCTCCTCGGACCCTGG
CCCTCAACGCAAAGAGTGCTGCTGTTGCTGTTGCTGCTGCTGCTGCTTGT
GCTTGCCGTCCTTTCTCCTGCCGCGTGTCTCTTTCTATTCGACTCGGCGG
TATCCTTATTTTTTTTACTCAATAATATTCTGGTCCGGTATGGCGGCCAC
GGATGGTGTTGGCGACAACGACGACGACAACCGCAACGGCGGTTACCGGC
CGGACACGCGCGAAAAACGCACGAAATAAAAAAACGCCTCCAAGCAGCCC
CATTCCAGATATTCTCCGACGGCGGCTGGCGGGGCAGGTGCGGCACGGAC
TCTCGCAGGCCGAGTTCGCGGTGAGGCGGGACGGGAAGCTGTTGCTGGCG
ACGGTGGGGCTGCCCGCCCGAGGGAAGACGTACATCGCGCAGAGCATCAA
GCGGCACATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5923:10..3819-

>mRNA_Ecto-sp13_S_contig5923.16456.1 ID=mRNA_Ecto-sp13_S_contig5923.16456.1|Name=mRNA_Ecto-sp13_S_contig5923.16456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5923:10..3819- (Ectocarpus species13 EcNAP12_S_4_19m)
CAATCGCTTTCCCTCTTCGGCACTCTCCACTTCTTAGTCTCTCTGCTTCC
AGTGATATTCTACACAGGAGGGCGAGACGTGCTTCGCATGGAGAATGACG
ACACGTTTGCACCACGGCCGGGGACCAAGAGCACGTGGACGCATGTGAAA
GTCTGCGGCACGAAGGCGAGTTATTTCAGAAAACAGCGGCGTGAATGGCA
CACGGCCGACTCTTCGGGCAACGAGACCGGGGATGCTGTTGCCGCTGATG
CTGCCGGGGCGGTTCATGATCCGTACGGGGAGGAATCCGGATCGTCTACT
CACGGATGCCTGGGCGGAACCGACGCGTCGAACAGCAGCATGAACGAGCG
GAACCTCTTCCGGATGACCGACTCCCTCGCGGACAGGACCTTCTCCTTCG
CGCCGGCGGAGACCCCTCCCGTCTCGCCTTCCCCCGCGGGCAGGGGCGGC
GGCGGCGGCGGCGGCGGCTCCGGCCGCATCTTCGAGAAAAAGGTTAGGTC
GGTGTCGGACTCGTTCGGGCCGCAGCCTTCAGCGGGGAAGGGGTCAGGAG
GAGGAAGTTTTGAAGGCGGCGGCGACGGGGATGCGTCGGCGGCGGTACAG
ATGCCGCTGCCTGGGCCCAAGAAGGCCATCAGCCAGAGGCAGTTCTTCCG
GCCCGTTTCGATGTCGTCGTCGGTGTTCAAAGAGAGCCCCATTCCAGATA
TTCTCCGACGGCGGCTGGCGGGGCAGGTGCGGCACGGACTCTCGCAGGCC
GAGTTCGCGGTGAGGCGGGACGGGAAGCTGTTGCTGGCGACGGTGGGGCT
GCCCGCCCGAGGGAAGACGTACATCGCGCAGAGCATCAAGCGGCACATG
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