prot_Ecto-sp13_S_contig5921.16454.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5921.16454.1
Unique Nameprot_Ecto-sp13_S_contig5921.16454.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length75
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5921.16454.1 vs. uniprot
Match: D7FPQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ6_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 1.290e-29
Identity = 58/74 (78.38%), Postives = 61/74 (82.43%), Query Frame = 0 
Query:    1 MNRLKRAFWVEGVAGAARKAEEINRSQEPCWSIVRFLPPLPDFVFAFKRVKRPRDPPRKQETLQPAE-HDGAVI 73
            MNRLKRAF  +GVAGA RKAEEI+RSQEP W IVR LP LPDFVFAFK VKRPRD PRK ETLQPA   DGAV+
Sbjct:   50 MNRLKRAFRDKGVAGAGRKAEEIDRSQEPYWKIVRVLPALPDFVFAFKLVKRPRDLPRKLETLQPAVLFDGAVM 123
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BLAST of mRNA_Ecto-sp13_S_contig5921.16454.1 vs. uniprot
Match: A0A6H5JPN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN6_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 5.680e-25
Identity = 51/66 (77.27%), Postives = 53/66 (80.30%), Query Frame = 0 
Query:    1 MNRLKRAFWVEGVAGAARKAEEINRSQEPCWSIVRFLPPLPDFVFAFKRVKRPRDPPRKQETLQPA 66
            MNR K AFWVEGV GAA KAE +NRSQE  W+IVR LPPLPDFVFAFK  KRPRD  RK ETLQPA
Sbjct:   90 MNRSKHAFWVEGVKGAACKAE-VNRSQESYWNIVRRLPPLPDFVFAFKCAKRPRDSSRKVETLQPA 154
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5921.16454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPQ6_ECTSI1.290e-2978.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPN6_9PHAE5.680e-2577.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5921contigEcto-sp13_S_contig5921:6479..6703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5921.16454.1mRNA_Ecto-sp13_S_contig5921.16454.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5921 6479..6828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5921.16454.1 ID=prot_Ecto-sp13_S_contig5921.16454.1|Name=mRNA_Ecto-sp13_S_contig5921.16454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp
MNRLKRAFWVEGVAGAARKAEEINRSQEPCWSIVRFLPPLPDFVFAFKRV
KRPRDPPRKQETLQPAEHDGAVID*
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