mRNA_Ecto-sp13_S_contig5918.16450.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5918.16450.1
Unique NamemRNA_Ecto-sp13_S_contig5918.16450.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A6H5L567_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L567_9PHAE)

HSP 1 Score: 840 bits (2170), Expect = 8.680e-303
Identity = 446/476 (93.70%), Postives = 453/476 (95.17%), Query Frame = 1 
Query:    1 MPADGSYTMRAQPRRRKDVKDEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAGVDVKHEIPPTAGWAKKRRLAGEWDGTAGENESESGAVVGVAAGPTRVVKMEAAAGPTAVSGGGDGGENAAAAVRVKPELSEEPMYQFSMGTDGNPTAGAGDGDGLIIGGGALCRDSSFLRDLDNMSVGSMGGGGSLGPLELIDVASSEDGEKSRAVGSIGVDAMNESLFDLDFDAEITSMPGSDLASNDGQRQQQQPSESETAEIKSSSANPAASATSXPAAPVSGVAPASAPGVVNTLANGGRAGVAEPPEIALPLASAAIGAFMVHYATAQAVKEPASAVAAVALDKSRHALERTASLH 1428
            MPADGSYTMRAQPRRRKDVKDEPIFLRKTYEMINTCEDVHAAWT+AGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITV+GQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSA GAGVDVKHEIPPTAGWAKKRRLAGEWDG AG NESESGAVVGVAAGP RV KMEA AGPTAV G G+GGEN A AVRVKPELSE P+YQFSMGT G+PTAGAGD DGLIIGGGALCRDSSFLRDLDNMSVGSMGGGGSLGPLELIDVASSEDGEK RAVGS G DA+NES FDLDFDAEITSMPGSDLAS DGQRQQQQPSESETA I+SSSANPAASATS PAAPVS VAPAS PGVVNTLANG RAGVAEPPEIALPLASAAIGAFMVHYATAQAVKEPASAVAAVALDKSRHALERTASLH
Sbjct:    1 MPADGSYTMRAQPRRRKDVKDEPIFLRKTYEMINTCEDVHAAWTAAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVDGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSASGAGVDVKHEIPPTAGWAKKRRLAGEWDGMAGANESESGAVVGVAAGPPRV-KMEATAGPTAVCGSGEGGENDAVAVRVKPELSEGPVYQFSMGTGGDPTAGAGDCDGLIIGGGALCRDSSFLRDLDNMSVGSMGGGGSLGPLELIDVASSEDGEKPRAVGSTGEDAINESFFDLDFDAEITSMPGSDLASKDGQRQQQQPSESETAAIESSSANPAASATSTPAAPVSDVAPASVPGVVNTLANGRRAGVAEPPEIALPLASAAIGAFMVHYATAQAVKEPASAVAAVALDKSRHALERTASLH 475
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A835YK43_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK43_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.770e-59
Identity = 109/176 (61.93%), Postives = 134/176 (76.14%), Query Frame = 1 
Query:    7 ADGSYTMRAQPRRRKDVK---DEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDSK----WWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSA 513
            A G YTMRAQPRRRK+     DEP+FLRKTY+MIN+C+   A W++ GDTFVIKDPD FA EVIP FFKH+KFSSFVRQLNFYGFRKVK+   ++G+D+     WWEFKHDLF R  P+L++EI+RATHY V P + EVD LR+EV +L  +++ MD RI ALS +VD L  + SA
Sbjct:    4 ASGEYTMRAQPRRRKESASRGDEPVFLRKTYDMINSCDQTLAGWSAKGDTFVIKDPDRFAAEVIPTFFKHSKFSSFVRQLNFYGFRKVKA---LDGRDAAAAAGWWEFKHDLFTRATPHLIAEIKRATHY-VAPPEAEVDALRTEVTTLTERMLAMDARIAALSALVDELRAQPSA 175
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A836CRK9_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK9_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.950e-58
Identity = 110/187 (58.82%), Postives = 139/187 (74.33%), Query Frame = 1 
Query:    1 MPADGSYTMRAQPRRRKDVK-DEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQD---------SKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSA---GGA 522
            MP  G YTMRAQPRRRK+ + DEP+FLRKTYEMINTC+   A+W++ GDTF+IK P+ FA EVIP FFKH+KF+SFVRQLNFYGFRKVKS + +  ++         S+WWEFKHDLF RD P+LLS IRRATHY   PEK EVD L+ EV +L+ ++V MD RI +L+ + + + E+ +A   GGA
Sbjct:    1 MPTMGDYTMRAQPRRRKEQQGDEPVFLRKTYEMINTCDTSLASWSARGDTFIIKSPERFAAEVIPTFFKHSKFASFVRQLNFYGFRKVKSALPLGARERSAAADADTSQWWEFKHDLFARDAPHLLSAIRRATHYVAPPEK-EVDALKGEVSTLQARIVTMDERISSLTTLPEPVYEDGAAFVGGGA 186
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: D8LTY4_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY4_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 6.270e-56
Identity = 103/180 (57.22%), Postives = 129/180 (71.67%), Query Frame = 1 
Query:    1 MPADGSYTMRAQPRRRKDVK-DEPIFLRKTYEMINTCEDVH----AAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAG 525
            MP  G YT RAQPRRR ++   EPIFLRKT+EM++ C        A W+  G+TF++K PD F++ VIP+FFKH+KFSSFVRQLNFYGFRKVKSN +  G +SKWWEFKHDLF RDK +LL+++RRATHYGV  +KQEV+ LRSEV  LR  +  M  +I  L+ +V+ L  E   G  G
Sbjct:    1 MPTCGEYTTRAQPRRRAEMAAQEPIFLRKTFEMVSACSKSDGENLACWSPTGETFIVKHPDAFSSVVIPKFFKHSKFSSFVRQLNFYGFRKVKSNASGAGVNSKWWEFKHDLFHRDKSHLLADMRRATHYGVAADKQEVEHLRSEVTRLRSHIDAMGDKIGQLTSLVESLSVEGHTGSGG 180
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A6H5JT33_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT33_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.590e-54
Identity = 116/232 (50.00%), Postives = 147/232 (63.36%), Query Frame = 1 
Query:    1 MPADGSYTMRAQPRRRKDVK-DEPIFLRKTYEMINTCEDVH----AAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAG----------VDVKHE---IPPTAG------WAKKRRLAGEWDGTAGENESE 624
            MP  G YT RAQPRRR ++   EPIFLRKT+EM++ C        A W+  G+TF++K PD F++ VIP+FFKH+KFSSFVRQLNFYGFRKVKS  +  G +SKWWEFKHDLF RDK +LL+++RRATHYGV  +KQEV+ LRSEV  LR  + DM  +I  L+ +V+ L  E  AG  G          + V H     PP  G       A   RL+  +D  AG+ E +
Sbjct:    1 MPTCGEYTTRAQPRRRAEMAAQEPIFLRKTFEMVSACSKSDGENLACWSPTGETFIVKHPDAFSSVVIPKFFKHSKFSSFVRQLNFYGFRKVKSKASGAGVNSKWWEFKHDLFHRDKSHLLADMRRATHYGVAADKQEVEQLRSEVTRLRSHIHDMGDKIGQLTSLVESLSVEGHAGSGGDTTVEGPAGQLAVSHRRGPTPPPGGDELCGVRAGLGRLSFGFDAAAGDQEGD 232
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.590e-44
Identity = 94/207 (45.41%), Postives = 133/207 (64.25%), Query Frame = 1 
Query:   22 TMRAQPRR-RKDVKDEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN-ITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQE--VDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAGVDVKHEIPPTAGWAKKRRLAGEWDGTAGENESESG 630
            ++RA PRR RKD  + P+FL+KTY+MI++C    A W+ AGDTF++KD + FAN ++PRFFKH  F SFVRQLNFYGFRK++++   +  + S WWEF+H+ FLR KP LL+ I+RA HY   P  Q   V+DL+SEV  LR ++ DM   I+ L+ +VD L+ ER+      + + E    A  A+ R  A   + +AG   +  G
Sbjct:   42 SVRAAPRRARKDPNEAPVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFAN-LLPRFFKHKNFRSFVRQLNFYGFRKLRTDGALISDRPSNWWEFRHEKFLRGKPELLTHIKRANHYETAPADQVELVEDLKSEVFQLRERIDDMSSTIEKLTSLVDTLMRERA------EARVEEADVAVTAQDRAAATRAEDSAGRTAAGEG 241
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A7S2BCY3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCY3_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.290e-43
Identity = 92/190 (48.42%), Postives = 127/190 (66.84%), Query Frame = 1 
Query:   22 TMRAQPRR-RKDVKDEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSN-ITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQ-EVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAGVDVKHEIPPTAGWAKKRRL 582
            T RA PRR RKD  + P+FL+KTY+MI+TC    A W+  GDTF++KD + FAN ++PRFFKH  F SFVRQLNFYGFRK++++   +  + + WWEF+HD FLR    LL +I+RA HY   P +Q EV+ L++EV +LR ++ DM   I+ L+ +VD LL ER      +++   +    G AKKRRL
Sbjct:    7 TARAPPRRGRKDPNEAPVFLQKTYQMIDTCPSDIAGWSEEGDTFIVKDMEEFAN-LLPRFFKHRNFRSFVRQLNFYGFRKLRTDGALISERPAHWWEFRHDKFLRGHSRLLVQIKRANHYEPAPSEQGEVEFLKTEVTNLRDRIHDMSQTIEHLTELVDTLLLERQEKADPLEIAG-MEMECGSAKKRRL 194
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A7S1GQW1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW1_CYCTE)

HSP 1 Score: 169 bits (429), Expect = 1.400e-43
Identity = 82/156 (52.56%), Postives = 111/156 (71.15%), Query Frame = 1 
Query:   46 RKDVKDEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKS-----NITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLL 498
            +KD ++ PIFLRKTY MI+TC+   A W+  G TFV+KDP+ FA E+IP+FFKHN FSSFVRQLNFYGFRK+KS     N  +   +SKWW F+H+ F R +P+LL EIR+A     +P+KQEVD L++EV  LR ++ +M   ID L+ +V  ++
Sbjct:   43 KKDAENAPIFLRKTYHMIDTCDTAIATWSEDGTTFVVKDPEKFAAEIIPQFFKHNNFSSFVRQLNFYGFRKIKSDPIKINTAINDIESKWWRFRHEKFQRGRPDLLGEIRKANQTE-SPDKQEVDALKNEVKDLRARMANMATDIDKLTALVKNMM 197
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: A0A7S4K047_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K047_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.940e-42
Identity = 83/151 (54.97%), Postives = 110/151 (72.85%), Query Frame = 1 
Query:   61 DEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKS-----NITVEGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLL 498
            D PIFLRKTY MI+TC+   A+W+  GDTFV+KD + FA+++IP+FFKHN FSSFVRQLNFYGFRK+KS     N  +E  D+K W F+HD FLR +P+LL EIR+A+     PEK+EVD L+ EV  LR Q+  M G I+ L+ +V+ ++
Sbjct:   50 DCPIFLRKTYHMIDTCDPAIASWSEEGDTFVVKDTEKFASDIIPQFFKHNNFSSFVRQLNFYGFRKIKSDAIKLNPVLEELDAKHWRFRHDKFLRGRPDLLKEIRKASQ--TNPEKEEVDTLKKEVKDLRSQLSHMSGDINRLTSLVENMM 198
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BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Match: W7U925_9STRA (Winged helix-turn-helix transcription repressor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U925_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.900e-42
Identity = 86/179 (48.04%), Postives = 116/179 (64.80%), Query Frame = 1 
Query:   58 KDEPIFLRKTYEMINTCEDVHAAWTSAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITV-------------------EGQDSKWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEERSAGGAGVDVK 537
            +D+P+FLRKTY+M+ +C    AAW+  GD+F+IKDPD+FA  VIP++F HN FSSFVRQLNFYGFRKVK ++ V                       +KWWEF+HD F+R KP LL++IRRATH G + E QEV  L++EVG L+ ++ +M   ID L+ +V  L+  +  G  G D K
Sbjct:   78 RDQPLFLRKTYQMLESCSPSIAAWSGKGDSFLIKDPDSFAQTVIPQYFSHNNFSSFVRQLNFYGFRKVKQDVRVLQGGSNAXXXXXXXXXXXXXXXXAKWWEFRHDKFIRGKPQLLAQIRRATH-GASNE-QEVSHLKTEVGQLKDRIQEMSSDIDRLTSLVQGLMVAKM-GSEGADPK 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5918.16450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L567_9PHAE8.680e-30393.70HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YK43_9STRA2.770e-5961.93HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A836CRK9_9STRA2.950e-5858.82HSF-type DNA-binding-domain-containing protein n=1... [more]
D8LTY4_ECTSI6.270e-5657.22Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5JT33_9PHAE1.590e-5450.00HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S2WDE9_9STRA2.590e-4445.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BCY3_9STRA1.290e-4348.42Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1GQW1_CYCTE1.400e-4352.56Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S4K047_9STRA1.940e-4254.97Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
W7U925_9STRA4.900e-4248.04Winged helix-turn-helix transcription repressor n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5918contigEcto-sp13_S_contig5918:910..4453 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score145.6
Seed ortholog evalue6e-32
Seed eggNOG ortholog2850.Phatr45112
Preferred nameHSF4
Model size1982
KEGG koko:K09414,ko:K09415,ko:K09416,ko:K09417,ko:K09419
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000165,GO:0000228,GO:0000280,GO:0000302,GO:0000775,GO:0000776,GO:0000785,GO:0000790,GO:0000791,GO:0000792,GO:0000922,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001078,GO:0001101,GO:0001161,GO:0001162,GO:0001227,GO:0001228,GO:0001654,GO:0001701,GO:0001817,GO:0001818,GO:0001890,GO:0001892,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0002376,GO:0002673,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003712,GO:0003713,GO:0003714,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006282,GO:0006325,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006468,GO:0006482,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006986,GO:0006996,GO:0007049,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007292,GO:0007346,GO:0007423,GO:0007565,GO:0007568,GO:0007600,GO:0007601,GO:0008150,GO:0008152,GO:0008214,GO:0008284,GO:0008285,GO:0008340,GO:0009058,GO:0009059,GO:0009266,GO:0009299,GO:0009314,GO:0009408,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010656,GO:0010660,GO:0010662,GO:0010664,GO:0010665,GO:0010667,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0014070,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016569,GO:0016570,GO:0016577,GO:0016604,GO:0016605,GO:0016607,GO:0017085,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030162,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031440,GO:0031442,GO:0031490,GO:0031620,GO:0031647,GO:0031650,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032355,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032680,GO:0032720,GO:0032774,GO:0032870,GO:0032991,GO:0033169,GO:0033554,GO:0033574,GO:0033993,GO:0034599,GO:0034605,GO:0034614,GO:0034620,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035690,GO:0035770,GO:0035966,GO:0035967,GO:0036003,GO:0036211,GO:0040008,GO:0040014,GO:0040018,GO:0040024,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042509,GO:0042531,GO:0042542,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0043009,GO:0043010,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043280,GO:0043281,GO:0043388,GO:0043393,GO:0043412,GO:0043434,GO:0043497,GO:0043565,GO:0043618,GO:0043620,GO:0043621,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044213,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044706,GO:0045087,GO:0045120,GO:0045595,GO:0045597,GO:0045738,GO:0045787,GO:0045862,GO:0045892,GO:0045893,GO:0045927,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046425,GO:0046427,GO:0046483,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046982,GO:0046983,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050727,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050821,GO:0050829,GO:0050832,GO:0050877,GO:0050896,GO:0050953,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051879,GO:0052547,GO:0052548,GO:0060136,GO:0060255,GO:0060548,GO:0061408,GO:0061458,GO:0061770,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070206,GO:0070207,GO:0070301,GO:0070887,GO:0070988,GO:0071214,GO:0071229,GO:0071230,GO:0071236,GO:0071241,GO:0071243,GO:0071248,GO:0071276,GO:0071280,GO:0071310,GO:0071375,GO:0071392,GO:0071396,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0072686,GO:0072737,GO:0072738,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090083,GO:0090084,GO:0090261,GO:0090304,GO:0097159,GO:0097165,GO:0097237,GO:0097327,GO:0097431,GO:0097659,GO:0097677,GO:0098542,GO:0098687,GO:0098847,GO:0104004,GO:0140013,GO:0140110,GO:1900034,GO:1900117,GO:1900119,GO:1900363,GO:1900365,GO:1901214,GO:1901215,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902074,GO:1902075,GO:1902510,GO:1902512,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902749,GO:1902751,GO:1902806,GO:1902808,GO:1903046,GO:1903311,GO:1903313,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903624,GO:1903626,GO:1903935,GO:1903936,GO:1904385,GO:1904526,GO:1904528,GO:1904892,GO:1904894,GO:1990776,GO:1990837,GO:1990841,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033,GO:2001056,GO:2001141
Exons3
EggNOG free text desc.heat shock factor
EggNOG OGs2XCJ0@2836,COG5169@1,KOG0627@2759
Ec32 ortholog descriptionHeat Shock transcription factor
Ec32 orthologEc-01_002650.1
Cds size1431
COG Functional cat.K
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463822.819852-UTR-Ecto-sp13_S_contig5918:909..14601681463822.819852-UTR-Ecto-sp13_S_contig5918:909..1460Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5918 910..1460 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463822.861167-CDS-Ecto-sp13_S_contig5918:1460..25791681463822.861167-CDS-Ecto-sp13_S_contig5918:1460..2579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5918 1461..2579 -
1681463822.8729322-CDS-Ecto-sp13_S_contig5918:3517..36241681463822.8729322-CDS-Ecto-sp13_S_contig5918:3517..3624Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5918 3518..3624 -
1681463822.8820705-CDS-Ecto-sp13_S_contig5918:4248..44531681463822.8820705-CDS-Ecto-sp13_S_contig5918:4248..4453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5918 4249..4453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5918.16450.1prot_Ecto-sp13_S_contig5918.16450.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5918 1461..4453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5918.16450.1

>prot_Ecto-sp13_S_contig5918.16450.1 ID=prot_Ecto-sp13_S_contig5918.16450.1|Name=mRNA_Ecto-sp13_S_contig5918.16450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=477bp
MPADGSYTMRAQPRRRKDVKDEPIFLRKTYEMINTCEDVHAAWTSAGDTF
VIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDSKW
WEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVD
MDGRIDALSRMVDRLLEERSAGGAGVDVKHEIPPTAGWAKKRRLAGEWDG
TAGENESESGAVVGVAAGPTRVVKMEAAAGPTAVSGGGDGGENAAAAVRV
KPELSEEPMYQFSMGTDGNPTAGAGDGDGLIIGGGALCRDSSFLRDLDNM
SVGSMGGGGSLGPLELIDVASSEDGEKSRAVGSIGVDAMNESLFDLDFDA
EITSMPGSDLASNDGQRQQQQPSESETAEIKSSSANPAASATSTPAAPVS
GVAPASAPGVVNTLANGGRAGVAEPPEIALPLASAAIGAFMVHYATAQAV
KEPASAVAAVALDKSRHALERTASLH*
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mRNA from alignment at Ecto-sp13_S_contig5918:910..4453-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5918.16450.1 ID=mRNA_Ecto-sp13_S_contig5918.16450.1|Name=mRNA_Ecto-sp13_S_contig5918.16450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3544bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5918:910..4453- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGCTGACGGATCCTATACCATGCGGGCGCAGCCCCGGCGACGGAA
GGACGTCAAGGATGAGCCCATTTTCCTTCGCAAGACGTATGAGATGATCA
ACACCTGCGAGGACGTTCACGCGGCCTGGACTTCTGCGGGCGACACCTTC
GTGATCAAAGACCCAGACACGTTCGCCAATGAGGTCATCCCACGGTTCTT
CAAACGTAAGCAATTCTTGTGTGTCGATTCGCGTTGCTACAGCAGGTAGC
GGCTTGTGTGCACGGGGATAGAGTGCGCGTAGTGTTACGTCCCTGCTGCC
ACTGGCTACGTGTTGCCTGCTGCTCCTGCTGCTGCTGCCTCCCTTCCAGC
TGCGGGCGGGCCTTTCTCCACATTTTCCCCACTTGCCACGCTACTTCCCG
TTGAAAAACACACGGCGAAATAACGCAGAATCTAGCCGTCTTCGGATCGT
GCCCCGCTACGTGCTGACCAGGTTTACAGGCACGCGCAGAAAAGTCAGCT
GTCTAGTTAGTCCGACGGCCGATGTATGCACGCGTGCACTGTCATCTCAA
ATTCTAATGTAGTGTCCGGCAGGTTTGTTTATTTCGGATCGAGATCGTCT
GGCACGAAGTAAGATTCGATTCGTATGCCCTTCTGTAAATGCATTGCCAC
ATTCCCACATGAGGCGCCACCTGGCGCGCAGTTATTTTTTTCTGTTGCAC
TCATATTTTTCTGTCCCGCACAGTCAGTACACAGCAGTGCGGCGTTTCAT
CGGGAAGAAACCGAAGCACTGACGCAATAACAACCGAACTGGTCTGCTTT
CGGTTGCTCCTCTGCATGTGTCCATGCAGACAACAAGTTCAGCTCCTTCG
TCAGGCAGCTCAACTTTTACGGCTTCCGCAAGGTCAAATCCAACATTACT
GTGGAGGGGCAGGACAGCAAGTGGTGGGAGTTCAAGGTGCGTGAGTCATC
AGCGTAGAGGAAGAGGATGGTGTGTGTGATCCCACAGCCATAGAGCAGCA
TCTCACCACACATAAGATGCTAATCTCTGTAAACGAGGGCGGTGCATATC
GTGTGTGGCATCAAGACGAGTTAGAAGTAGGAGTAGGAGAGTGAGATTCA
CAAGTTAATGAACAACCATCTACTGAACGATTTCAGCACAGCAGTACTTG
GACGGGTAGAAACTTCGCTGTGTATCTCGGTTATCGTACATATCGATGCA
CGTATGCACACAAAATGCATATGCCGTCCAAGTGTCTTCCCGCATCCCCC
CTATTTCCGTCTCCCTCTTGTTTTTATTTTTTATTTTCTTGATATCACTC
AACAAATCCATCTCTATCGAAATAAGTTTTGCGTTCACGGATGTGCTGAA
GCTGGTGGCTACTACATACTGTTTTTATCCAACGTCGCAGACAGGAGCAA
GCAGTGACACGAAACTGCTGCGGTTTATGAGAAAAACATACTGCTGCTCC
CCTTGAAGATATTCCACAGCAGTCGCAGGGCATGGTGTGTCAAATTTTTG
ACCAGCGAGTGGGCAGAAAATGGACTGGATATGGGCTTATTTAGGGTATA
TTTTAACCTCGACACTGGATTGTTTTTCACATGTAGCGCCAACATTTATC
CCCTCGCCACGGGGAAGATCGTGTGTCTTGAATCACGCCGTGTCTTGGAA
GTGTGTAATGTGCAGTGTGCAGTGTGTCGGAACTGTTGCTGCGTTTTGAT
CAAGATAGCTCATGGGAACCATCCGTCGAAGACTCCAGTGCCCGCCGTAA
CGCACTGCTGCTGTGGCCGCATACACGCACCACGTAGTAAAGCTCGTTCA
CGTCGAACCCTAAGACCTTTCCTTACGCTTGCACGCCCCTGTCCTAAATC
CATCGTGCTGCTGAAAATCCACAGCACGACTTGTTCCTTCGCGACAAGCC
CAATCTCCTGTCAGAGATACGCCGCGCCACCCACTACGGCGTCACGCCGG
AAAAGCAAGAGGTGGATGACCTTCGATCGGAGGTGGGGAGCTTGCGGCTG
CAGGTCGTCGACATGGACGGCCGCATCGACGCGCTCTCGCGCATGGTGGA
CCGCCTCCTGGAGGAGCGCTCGGCGGGCGGCGCGGGCGTTGACGTGAAGC
ACGAGATCCCGCCTACCGCAGGCTGGGCAAAGAAGCGCCGCCTGGCAGGG
GAGTGGGACGGGACGGCAGGCGAAAACGAGTCCGAGAGCGGCGCTGTTGT
TGGGGTCGCCGCGGGACCTACTCGCGTCGTCAAGATGGAGGCGGCCGCAG
GGCCGACGGCCGTGAGCGGCGGCGGCGATGGCGGGGAGAATGCCGCCGCT
GCTGTGCGGGTCAAACCTGAGCTGTCGGAGGAACCGATGTACCAGTTTTC
TATGGGAACGGACGGTAATCCCACGGCTGGCGCGGGTGACGGTGACGGGC
TCATCATCGGCGGCGGGGCTCTCTGCCGCGACTCTTCGTTCTTGCGGGAC
CTCGACAACATGAGTGTCGGTTCGATGGGCGGCGGTGGGTCCCTGGGCCC
CCTTGAACTTATCGACGTGGCGTCCAGCGAGGACGGCGAAAAGTCTCGCG
CCGTTGGCAGCATTGGCGTGGATGCCATGAACGAGAGCTTGTTCGACCTC
GACTTCGACGCCGAAATCACTTCCATGCCTGGCTCTGACCTCGCCTCGAA
CGACGGCCAGCGGCAGCAACAGCAGCCATCCGAGAGCGAGACAGCGGAGA
TCAAGTCTTCCTCCGCGAATCCTGCGGCTTCTGCAACGTCGACCCCGGCA
GCGCCAGTATCAGGCGTGGCCCCGGCCTCGGCTCCGGGTGTCGTGAACAC
CCTCGCGAACGGCGGGCGCGCGGGTGTGGCGGAGCCTCCTGAGATCGCTC
TCCCTCTGGCCAGCGCCGCGATCGGGGCGTTCATGGTGCACTACGCGACG
GCGCAAGCTGTGAAGGAGCCGGCGAGCGCGGTGGCGGCCGTCGCTTTGGA
CAAGTCGAGGCATGCGCTCGAGCGGACCGCTTCACTTCATTGATCAGCAG
CGGGGGAGGAACGGGGGAGGGGCTCTGATACCGTGGTGCCTGTTTTATGT
CTTTGTTGTTGAGTTAGACGTCGTGTCGGGTGGGAGAGAACCCACGGTTG
CGTGTCTGTTCTGGTCGTGAAGAATGGGACGATCAGGAGGTATGTACGTG
CGCGGCTCTGTTGGTGTACAAAAGCGGGGGAGGGTGTACCTCGGCTGATG
GAGGGGTTAACGCGTCCCTTGTTGCTGCAAGTGGGAGGCATCGATGGAGA
TCTGGGAAGCTGTTTCTCAACCCGTTTGGCTGTTAATTTTTTTTTTGTAT
CAAGGGCCGGACGGACGCAAGGATTTTTGACATAAGAGGGCGTCTCGACG
TTTTCTGTTCAGATGCTAGGCTTGCGTAAGTTTGTTTTAGCATTCCCGTG
TTGAAGTTTTGCCGTGTTTCGGGTTTCCTGCAACCTTGAGTGAAGGCAAG
CAAGCACGTATGCATGCGTTAATTGTACAAATGTGCTCCAGTTTTTTCTA
CTTCGTACTTCGAAGAAAAGTATAATTTTTCTTTTTTTCACGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5918:910..4453-

>mRNA_Ecto-sp13_S_contig5918.16450.1 ID=mRNA_Ecto-sp13_S_contig5918.16450.1|Name=mRNA_Ecto-sp13_S_contig5918.16450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1431bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5918:910..4453- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGCTGACGGATCCTATACCATGCGGGCGCAGCCCCGGCGACGGAA
GGACGTCAAGGATGAGCCCATTTTCCTTCGCAAGACGTATGAGATGATCA
ACACCTGCGAGGACGTTCACGCGGCCTGGACTTCTGCGGGCGACACCTTC
GTGATCAAAGACCCAGACACGTTCGCCAATGAGGTCATCCCACGGTTCTT
CAAACACAACAAGTTCAGCTCCTTCGTCAGGCAGCTCAACTTTTACGGCT
TCCGCAAGGTCAAATCCAACATTACTGTGGAGGGGCAGGACAGCAAGTGG
TGGGAGTTCAAGCACGACTTGTTCCTTCGCGACAAGCCCAATCTCCTGTC
AGAGATACGCCGCGCCACCCACTACGGCGTCACGCCGGAAAAGCAAGAGG
TGGATGACCTTCGATCGGAGGTGGGGAGCTTGCGGCTGCAGGTCGTCGAC
ATGGACGGCCGCATCGACGCGCTCTCGCGCATGGTGGACCGCCTCCTGGA
GGAGCGCTCGGCGGGCGGCGCGGGCGTTGACGTGAAGCACGAGATCCCGC
CTACCGCAGGCTGGGCAAAGAAGCGCCGCCTGGCAGGGGAGTGGGACGGG
ACGGCAGGCGAAAACGAGTCCGAGAGCGGCGCTGTTGTTGGGGTCGCCGC
GGGACCTACTCGCGTCGTCAAGATGGAGGCGGCCGCAGGGCCGACGGCCG
TGAGCGGCGGCGGCGATGGCGGGGAGAATGCCGCCGCTGCTGTGCGGGTC
AAACCTGAGCTGTCGGAGGAACCGATGTACCAGTTTTCTATGGGAACGGA
CGGTAATCCCACGGCTGGCGCGGGTGACGGTGACGGGCTCATCATCGGCG
GCGGGGCTCTCTGCCGCGACTCTTCGTTCTTGCGGGACCTCGACAACATG
AGTGTCGGTTCGATGGGCGGCGGTGGGTCCCTGGGCCCCCTTGAACTTAT
CGACGTGGCGTCCAGCGAGGACGGCGAAAAGTCTCGCGCCGTTGGCAGCA
TTGGCGTGGATGCCATGAACGAGAGCTTGTTCGACCTCGACTTCGACGCC
GAAATCACTTCCATGCCTGGCTCTGACCTCGCCTCGAACGACGGCCAGCG
GCAGCAACAGCAGCCATCCGAGAGCGAGACAGCGGAGATCAAGTCTTCCT
CCGCGAATCCTGCGGCTTCTGCAACGTCGACCCCGGCAGCGCCAGTATCA
GGCGTGGCCCCGGCCTCGGCTCCGGGTGTCGTGAACACCCTCGCGAACGG
CGGGCGCGCGGGTGTGGCGGAGCCTCCTGAGATCGCTCTCCCTCTGGCCA
GCGCCGCGATCGGGGCGTTCATGGTGCACTACGCGACGGCGCAAGCTGTG
AAGGAGCCGGCGAGCGCGGTGGCGGCCGTCGCTTTGGACAAGTCGAGGCA
TGCGCTCGAGCGGACCGCTTCACTTCATTGA
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