prot_Ecto-sp13_S_contig5911.16439.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5911.16439.1
Unique Nameprot_Ecto-sp13_S_contig5911.16439.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5911.16439.1 vs. uniprot
Match: D7FXB9_ECTSI (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 6.770e-27
Identity = 49/52 (94.23%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 HDVIGSPVQVEGRSMQPAINPHLGPESQQGGGLDVVWQDKLSISRHIYERGS 52
            HDVIGSPVQVEGRSMQPAINPHLGPESQQG  LDVVWQDK SISRHIYERGS
Sbjct:   24 HDVIGSPVQVEGRSMQPAINPHLGPESQQGESLDVVWQDKRSISRHIYERGS 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5911.16439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXB9_ECTSI6.770e-2794.23Mitochondrial inner membrane protease subunit 2 n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5911contigEcto-sp13_S_contig5911:345..1217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5911.16439.1mRNA_Ecto-sp13_S_contig5911.16439.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5911 345..1217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5911.16439.1 ID=prot_Ecto-sp13_S_contig5911.16439.1|Name=mRNA_Ecto-sp13_S_contig5911.16439.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
HDVIGSPVQVEGRSMQPAINPHLGPESQQGGGLDVVWQDKLSISRHIYER
GS
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