prot_Ecto-sp13_S_contig5907.16433.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5907.16433.1
Unique Nameprot_Ecto-sp13_S_contig5907.16433.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length461
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Match: D7G366_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G366_ECTSI)

HSP 1 Score: 605 bits (1559), Expect = 3.130e-214
Identity = 310/339 (91.45%), Postives = 320/339 (94.40%), Query Frame = 0 
Query:    1 MDGFTRTGRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGHTPAVEEGYLRRKEVQRLICSQCMFVAGFLLPMFKQMTGIDKKSKRMAVGGPLIGIIGAGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGDAVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSS 339
            MDGFTRT RCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCG TPAVEEGYLRRKEVQRLICSQC+FVAGFL PMFKQM GIDKKSKRMAVGGPLIGI+GAGGQLGSAI  TFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDV+ETMGN+GL A GPTSRVGQAE SNGIKDQ DGDA+K  SDDWGC D+ATWRAVHERA+ HF P ARAVGKII+TIESFYVEQGLEPVQA QACRD LLPSVEPAALGTRS QRANLP+TLSS
Sbjct:    5 MDGFTRTWRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGQTPAVEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAVGKIIETIESFYVEQGLEPVQARQACRDWLLPSVEPAALGTRSHQRANLPRTLSS 343
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Match: D7G368_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G368_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 8.120e-159
Identity = 239/270 (88.52%), Postives = 250/270 (92.59%), Query Frame = 0 
Query:   75 MFKQMTGIDKKSKRMAVGGPLIGIIGAGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGDAVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSSLGKAR 344
            MFKQM GIDKKSKRMAVGGPLIGI+GAGGQLGSAI  TFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMS LAGISEGSLKRVLGTENLIQARVDIARLDV+ETMGN+GL A GPTSRVGQAE SNGIKDQ DGDA+K  SDDWGC D+ATWRAVHERA+ HF P ARA+GKII+TIESFYVEQGLEPVQA QACRDRLLPSVEPA LGTRS QRANLP+TLSS  + R
Sbjct:    1 MFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSNLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAIGKIIETIESFYVEQGLEPVQARQACRDRLLPSVEPAVLGTRSHQRANLPRTLSSPDEGR 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G366_ECTSI3.130e-21491.45F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
D7G368_ECTSI8.120e-15988.52F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028939Pyrroline-5-carboxylate reductase, catalytic, N-terminalPFAMPF03807F420_oxidoredcoord: 96..189
e-value: 2.3E-9
score: 37.7
NoneNo IPR availableGENE3D3.40.50.720coord: 95..226
e-value: 1.9E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR11645PYRROLINE-5-CARBOXYLATE REDUCTASEcoord: 96..211
NoneNo IPR availablePANTHERPTHR11645:SF58NADP-DEPENDENT OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 1coord: 96..211
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 96..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5907contigEcto-sp13_S_contig5907:2406..7090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5907.16433.1mRNA_Ecto-sp13_S_contig5907.16433.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5907 1370..7102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5907.16433.1 ID=prot_Ecto-sp13_S_contig5907.16433.1|Name=mRNA_Ecto-sp13_S_contig5907.16433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp
MDGFTRTGRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGHTPAVEEG
YLRRKEVQRLICSQCMFVAGFLLPMFKQMTGIDKKSKRMAVGGPLIGIIG
AGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLL
VRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLG
TENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGD
AVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQG
LEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSSLGKARSEHTVP
LSQRDSLTTTGNHDLDTRDSPHSLQEPENDRKSPSVIASRGAQPCQGEEP
NAPPDNRLEAEQEDVGTSPHLGDETVQPICDTPAGQKGVSHEKVRGCPIS
RDDADRMRAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028939P5C_Rdtase_cat_N
IPR036291NAD(P)-bd_dom_sf