mRNA_Ecto-sp13_S_contig5907.16433.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig5907.16433.1
Unique NamemRNA_Ecto-sp13_S_contig5907.16433.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Match: D7G366_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G366_ECTSI)

HSP 1 Score: 657 bits (1696), Expect = 1.730e-233
Identity = 365/557 (65.53%), Postives = 381/557 (68.40%), Query Frame = 1 
Query:    1 LASTMDGFTRTGRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGHTPAVEEGYLRRKEVQRLICSQCMFVAGFLLPMFKQMTGIDKKSKRMAVGGPLIGIIGAGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGDAVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSSLGKARSEHTVPLSQRDSLTTTGNHDLDTRDSPHSLQEPENDRKSPSVIASRGAQPCQGEEPNAPPDNRLEAEQEDVGTSPHLGDETVQPICDTPAGQKGVSHEKVRGCPISRDDADRMRAH*AADASFVQIYGITNSSWTSYDKSSIQHTHLPPNPLHPNLQMKEDGDKTDGERWTPQSNWPPPDLVLIEDAYEEMLRAPYGDAVRESGYQSGL 1671
            +ASTMDGFTRT RCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCG TPAVEEGYLRRKEVQRLICSQC+FVAGFL PMFKQM GIDKKSKRMAVGGPLIGI+GAGGQLGSAI  TFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDV+ETMGN+GL A GPTSRVGQAE SNGIKDQ DGDA+K  SDDWGC D+ATWRAVHERA+ HF P ARAVGKII+TIESFYVEQGLEPVQA QACRD LLPSVEPAALGTRS QRANLP+TLSS                                                                                                            P+                                           P+PLHPNLQMKEDGDK   ERWTP+S WPPPDLVL+ED YE+MLR PYGDAVRESGYQSGL
Sbjct:    1 MASTMDGFTRTWRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGQTPAVEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAVGKIIETIESFYVEQGLEPVQARQACRDWLLPSVEPAALGTRSHQRANLPRTLSS------------------------------------------------------------------------------------------------------------PVQ------------------------------------------PHPLHPNLQMKEDGDKPGCERWTPRSYWPPPDLVLMEDVYEQMLRVPYGDAVRESGYQSGL 407
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Match: D7G368_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G368_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 2.380e-157
Identity = 239/270 (88.52%), Postives = 250/270 (92.59%), Query Frame = 1 
Query:  235 MFKQMTGIDKKSKRMAVGGPLIGIIGAGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGDAVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSSLGKAR 1044
            MFKQM GIDKKSKRMAVGGPLIGI+GAGGQLGSAI  TFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMS LAGISEGSLKRVLGTENLIQARVDIARLDV+ETMGN+GL A GPTSRVGQAE SNGIKDQ DGDA+K  SDDWGC D+ATWRAVHERA+ HF P ARA+GKII+TIESFYVEQGLEPVQA QACRDRLLPSVEPA LGTRS QRANLP+TLSS  + R
Sbjct:    1 MFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSNLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAIGKIIETIESFYVEQGLEPVQARQACRDRLLPSVEPAVLGTRSHQRANLPRTLSSPDEGR 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5907.16433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G366_ECTSI1.730e-23365.53F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
D7G368_ECTSI2.380e-15788.52F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5907contigEcto-sp13_S_contig5907:1370..7102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1671
Hectar predicted targeting categoryother localisation
Exons11
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-03_004700.1
Cds size1383
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5907.16433.1prot_Ecto-sp13_S_contig5907.16433.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig5907 2406..7090 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463821.1889222-UTR-Ecto-sp13_S_contig5907:1369..14261681463821.1889222-UTR-Ecto-sp13_S_contig5907:1369..1426Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5907 1370..1426 -
1681463821.2002866-UTR-Ecto-sp13_S_contig5907:1923..20541681463821.2002866-UTR-Ecto-sp13_S_contig5907:1923..2054Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5907 1924..2054 -
1681463821.2118096-UTR-Ecto-sp13_S_contig5907:2116..21641681463821.2118096-UTR-Ecto-sp13_S_contig5907:2116..2164Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5907 2117..2164 -
1681463821.2230048-UTR-Ecto-sp13_S_contig5907:2365..24051681463821.2230048-UTR-Ecto-sp13_S_contig5907:2365..2405Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5907 2366..2405 -
1681463821.346211-UTR-Ecto-sp13_S_contig5907:7090..71021681463821.346211-UTR-Ecto-sp13_S_contig5907:7090..7102Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig5907 7091..7102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463821.234454-CDS-Ecto-sp13_S_contig5907:2405..28911681463821.234454-CDS-Ecto-sp13_S_contig5907:2405..2891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 2406..2891 -
1681463821.2611322-CDS-Ecto-sp13_S_contig5907:3168..34051681463821.2611322-CDS-Ecto-sp13_S_contig5907:3168..3405Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 3169..3405 -
1681463821.2756224-CDS-Ecto-sp13_S_contig5907:3780..39211681463821.2756224-CDS-Ecto-sp13_S_contig5907:3780..3921Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 3781..3921 -
1681463821.2847269-CDS-Ecto-sp13_S_contig5907:4575..46831681463821.2847269-CDS-Ecto-sp13_S_contig5907:4575..4683Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 4576..4683 -
1681463821.295457-CDS-Ecto-sp13_S_contig5907:5262..53561681463821.295457-CDS-Ecto-sp13_S_contig5907:5262..5356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 5263..5356 -
1681463821.3066154-CDS-Ecto-sp13_S_contig5907:5718..58611681463821.3066154-CDS-Ecto-sp13_S_contig5907:5718..5861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 5719..5861 -
1681463821.3162963-CDS-Ecto-sp13_S_contig5907:6308..64161681463821.3162963-CDS-Ecto-sp13_S_contig5907:6308..6416Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 6309..6416 -
1681463821.3300495-CDS-Ecto-sp13_S_contig5907:7024..70901681463821.3300495-CDS-Ecto-sp13_S_contig5907:7024..7090Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig5907 7025..7090 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig5907.16433.1

>prot_Ecto-sp13_S_contig5907.16433.1 ID=prot_Ecto-sp13_S_contig5907.16433.1|Name=mRNA_Ecto-sp13_S_contig5907.16433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp
MDGFTRTGRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGHTPAVEEG
YLRRKEVQRLICSQCMFVAGFLLPMFKQMTGIDKKSKRMAVGGPLIGIIG
AGGQLGSAIAHTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLL
VRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLG
TENLIQARVDIARLDVIETMGNRGLRADGPTSRVGQAECSNGIKDQYDGD
AVKEYSDDWGCNDVATWRAVHERAACHFIPHARAVGKIIDTIESFYVEQG
LEPVQAHQACRDRLLPSVEPAALGTRSQQRANLPQTLSSLGKARSEHTVP
LSQRDSLTTTGNHDLDTRDSPHSLQEPENDRKSPSVIASRGAQPCQGEEP
NAPPDNRLEAEQEDVGTSPHLGDETVQPICDTPAGQKGVSHEKVRGCPIS
RDDADRMRAH*
back to top

mRNA from alignment at Ecto-sp13_S_contig5907:1370..7102-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig5907.16433.1 ID=mRNA_Ecto-sp13_S_contig5907.16433.1|Name=mRNA_Ecto-sp13_S_contig5907.16433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5733bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5907:1370..7102- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGCGAGTACCATGGATGGGTTCACACGTACGGGGAGATGCATGGATCG
CTTGAACGTGGAAGACGAACTCGTTCAGGTGTGTCAAGGTGCCCGTATGC
CGGTGTCGCGTAGATACCTACATTGATGTGGCAGGTTATCCACCGCAGCA
AAGCACCGGGGGGAATGCTCATATTCAGGCAGGCTATGTTGAGTTTCCCA
TAGAAGCAGTCTTCCTATCCATGTTGGGCACCAAACCGTGCGCGGTAGTC
CGCATTTTCGCGCTACATCGATTGGCCTGCATCCACTTGGGGGAATTCTG
TCGAACTGCTTGAGGGTGAACGTAATTTACTCTACAACATTCCTTTGGAA
GTCATTGTCGATGTTTAAACCAGAGAGTGACTCCTTCCTTTCTGCTGAGC
AACGTGTTTCGCATCGCATTTGCGCATTAATCAAAATAGTTATAATAGTT
TCGATGAAACGTGTCTTTCCAGGTCCGCTGTGTGTAGAAACATGTAGAGC
GAAGGTCATTCACCGGGTGTGTCTCCTCGATAGCCAGGGTTGGTCGATGC
AGATGTCAATAAAGTATAGATGAAGGGGTCGACATAGTTTGATTTTGATC
ATGAAGCACCGCCCCCTTCAAGGGTCGATTTATGGGCTAAAACCGCACCT
GCCCTAACCACCAATCGCGCCGTTGTTGTCACCCAGGACCTTACCGATCC
CAACTTCGTTTTGAGAAATGTCGACCTGGCGTTTTCCTGCTGTGGCCATA
CCCCTGCAGTTGAGGAGGGCTACCTCCGACGGAAGGAAGTGCAGGTGGCC
ACGCTTCCTCGGATGAATAACCTTATATGTAGCGATTCTTGCAACAACAT
CTCCACGAGTCACACGAACTTCGTCCTCAAGCCGCATAAGCACACCTGCC
GCTGACTCAAAAACACGACTTCATTATAACTTCCGTCCAAAGGCCAGCTT
GGACCGCCGGTGAAAACCTGACATACGCCGTTCGCCGCTCTCGCGGTGTT
TGTTCCATGTCTCGGCCAAAGCTCGGGTATTTACCTCTATGCCGCACGGT
GGACAATCAAGTTCAATTTCTTTCTTTCAACATCCCGAGACTGTTGTTTC
CTTACGGTGTGACGGTCGCGGCGCTATGCGCAATCCATCATGTGTACGAA
AATGATGACGCATATGCCGCATCATGACCGAACGAACCGACGTTCGCCCG
ACGCTCGCTTTGCCCGTCATCATCACCCAACGTGTTTTCAGAGGTTGATT
TGTTCGCAGTGCATGTTCGTGGCGGGGTTCCTTCTTCCCATGTTCAAGCA
AATGACTGGTATCGACAAGAAGTCCAAACGGATGGCTGTCGGCGGCCCGC
TGATCGGAATCATCGGTGCGGGTGGCCAACTAGGGTGAGTAAGGCCAACG
TTATGATCGCTACAACGGAAGATTACCCGGTGCAGCACTAATTCAAGACC
AGAATCCAGACAGCCGAAGTAGACATTCTGGAGGAATCTGCAATCGCTAC
TGCCATGGGGCCCGACCGACGGACCGAGGCAAGTTGAACACAACAGTGGT
TCGTGAACCCGAAAATCTGCGTACATATTGAAGGGAGGGAACGGCAGACT
TCCCTTCACATGAAAAATGTGTCTTTGGCCAGTATTCCCCTTATCTTTGG
AAGCAACTGTGTGTACAAGCATTCCGCATCGACCCCCCCGCTGCTCTATT
CCCGAACACTTCCATTGCACCCTCGGACGCGTTAACCCTCGTGAAGATCG
GCCATAGCCCACACATTTCTTGACTACGGCTGGAAGCCTTTCCGTTTGGC
CGTGTCTGGCAGGGGCCAGAAAAAACTCCGCAAGTTTGAGGTGGGTGGTT
GGATGAATGGTGCTACGGAACTAATTGTTTTGTGGGTGCCCTCATTCCTC
GGGATGCACGCGTTGTATGACGGGCCTGTGTTCGCTAGTCGAAGGAGATG
GCGCAACAACAGGCAAGGACTAGCAGCGTGATTTTCATTCCGTGACTTGC
GCAAGGCCATACCCGAGGATGAGTCAAGAATTATTCTTTTTTTGAAATGT
ATTCACGCCATGAAAAGTTGTCGCAAGCTTTTGTTCAAAAGATTGTTGTA
CCAGATGGAGTATTTGCTGGGATAGAGAACCACCCTTGCCCCTATTGAAA
ATCACGTAGGCACGACTCTGTAGCGGGGAGGAATGCCGCACAGCTGTTGG
CACCATGTTTCTACATACGTAGTCCGGCGCAACTCGATGGACCTTTTTGT
GTCAACCTGGGGTCGGTTTCACTCGGTTGAAGCTCGAACATTCGCTTCCC
TGCTGTTTCACCATTCCTTATCCGCAAGAGGCTTCGGAGCCGCTTCCGAA
CGAACGCTATCATTTCAACACACGACCCGCTGTAACCGGCTGTCCAACCG
TCCGCGATTCCTCTGCCAGGCGCTAGGGGTCGGTGTGTTTGAAGACGTGT
CGCTGCTGGTCCGTGCCGTGCGGTTGGTGATAGTGGCCGTTGGACCCCAG
CACGCTAGACAAGTCGGCTCGACGCTCGTGAGTATCGCGTTCCATGATTG
TAGAATTGCCTCGGGATAGGATGAGGTCCCGTTTGTCGGTGTTGCGCCTG
TACGCTGAACTACATATCAAGACCGTTTATGGGGTCACATCTCGTGTTGG
CGGCTGTTTCGTGCAGGGTTTGGGCGCTACGGCTCGTGTGAAAGGGCCTC
CAGACCGATCTTATAGTTTTCGGTTTGCCTCTGCGCCCATGAAAGCGACG
GAAGGTTCTACGAGCGTTGTTCTGGGAGCATTCTTGGAAGTTCGAAGGTG
TTGCAGATTTCGTTCCACTCCACCATTTTTCATGTCGTCACTACATTGCT
TGTCCATTGGTTGTCGTCAATTTTTGCGTCAAAACGTGATTTCATACGAA
ATACCAAACACTAGTTCACCTTCTCTCTCCCAATGTCCCCATACAAGTTT
GGAAAGAAAATCGCAATTCCCGCTTTCCCACAACAAGGCTGGGACTCGAC
GTTCAAAGAGTTCAAGAAACGGCCCAGTCCTTCCCACCAAAACAAAGGAA
GACAGGCAACGCATCAGTAAATCGCAGAAAACATTAACCCACGCGTATTC
TTTCACCTGTGTCACCCTGGCCGGTTAGTCCACACTTACGTCCGGAGTAC
ATGAGATGATAAAACGCAAACGAATACGTAGGGAGATAATGGTACGGCAT
CAGCTTTGGTCATGAGCACCCTGGCGGGCATCAGCGAGGGGAGCCTAAAG
CGAGTCTTGGGAACGGAGAATTTAATTCAGGCTAGGGTGGACATCGCTCG
GCTTGACGTCATCGAAACGATGGTAAGTGGGTGTCCGACGTGGATCTTGT
GAACGCTTCTGGATCGGTGATCAAAAGCACATTAGTACAGCGAGGGATGT
CAGCCACCGTACTGAAAGTTTGATTTGGTGTTAGTGCCGAGAGCAGCCGC
AAGAGTAGCATGCGCTGCACAAGGTGTGTCAACGATGGCACGAGAACGAA
CCGACACACGATTATCATGTATCAGTCACAAGTTCTTTTGAAAAGTTGAC
TGAAACCGAAACTCCTAGTGACTGGCCTGACGCCAAGCATCGCAAACACC
GAACGCCCCTGTGCTGTCTGTTCGTTCATGAGAGGCGATCTCGATCCCCT
CCATTTCTGCTGCCACCACATCCCGTCTGACACAACCGCCACGACAGGGA
AATCGAGGTCTGCGCGCAGACGGCCCAACGTCTAGGGTAGGACAGGCAGA
GTGCTCAAACGGCATCAAGGACCAATATGACGGGGATGCGGTGAAGGAGT
ATTCCGACGACTGGGGATGTAATGACGTCGCAACGTGGCGGGCGGTGCAC
GAGCGCGCAGCGTGTCACTTCATACCTCATGCCCGGGCGGTCGGGAAGAT
TATCGACACGATAGAATCTTTCTACGTCGAGCAGGTGTGCGTGGACGCAT
ATTCCACACAGACCGCCACCGTATGGCTGACTTTTGTCGCGACACGAAGA
TGAGAGCCCAAGCGTATATGTCGCCAGACGATTGGGCATTGTATGTGGAG
TAGGTCGCGGGTCGTTGCACATTCGGCGTCGAAATCCGTTTCCTTCCTGG
TACACGTCATGATAAACGAGGAGGAGAAGAAGCGTTTGTGGTGAACTCCC
GTCCACACATGGCCATGCCGAGATCGTCATCTTCCCCCAACCTGAACCTC
GACGATGGCAGGGGCTCGAACCTGTCCAGGCGCACCAAGCATGCCGAGAT
CGGTTGCTACCTTCCGTCGAACCGGCGGCGCTCGGGACTAGGAGTCAACA
GAGGGCTAACTTGCCGCAAACTCTCTCATCTCTCGGCAAGGCGCGATCTG
AACACACGGTTCCGCTGTCTCAGCGCGATTCCCTCACGACCACGGGCAAC
CACGACCTGGACACGAGGGACAGTCCACATTCTCTGCAAGAACCAGAAAA
TGACCGCAAGTCTCCCAGTGTTATTGCGTCGAGAGGGGCGCAGCCCTGCC
AAGGCGAAGAGCCCAACGCTCCGCCGGACAACCGCCTCGAGGCTGAACAA
GAAGACGTAGGTACATCGCCTCATCTAGGGGACGAAACGGTACAACCCAT
ATGCGACACCCCCGCTGGGCAAAAGGGTGTCAGTCACGAAAAGGTACGAG
GCTGTCCAATCAGTCGGGACGATGCGGATCGAATGAGGGCTCACTAGGCA
GCCGACGCTAGTTTTGTACAAATTTATGGTATAACGAGTTGTGCGTAATC
TGGAGGCATGTTGTAGCAAACGTATCGTTTTCCGGCTCAGCAACGTCCTC
GGGTATGTGTGTGACAGCCGCCGCTGATGTTGTTAGCGTACGGGCGGGAA
TGATGCTGTATCATGCGCATTTTCAGACCCACTCTTCACCTGGTACTAAG
TGTCCGTACCAGCTCTTAACCAGGAGAGAAAAGTGAAGACAGCTCGTGGA
CCTCATACGACAAAAGTAGCATACAGCACACACACCGTACATCGTAGGCC
ACACAGGGAGGAGACTGCATTCGTCCCGCAATCGACCGTAACTGACAGTT
CCACCAAACCCGCTGCACCCAAACCTGCAGATGAAGGAAGACGGAGACAA
AACAGACGGCGAACGATGGACGCCGCAATCGAATTGGCCACCTCCAGATC
TGGTCCTCATCGAGGATGCCTACGAGGAGGTACAAAACTCGTCAAGAGAC
GACCGCACGATCATGTGTACTCCAGGTTCGATTCCCAGTCGAATATTCAT
GGTAGTTTCGCCTAGAAAGCCGGCAATGCATTACGAAGGCAACACATGCC
TCGTTTTTACCAGATTGTGTCAAAGAGTAGAGAGCGCATCAAACATTGAC
ATTCTACAGCATAGCTGATATATGGCGCGTACGATGGATACCCCGGCAAA
TTAATCAGGCGCTTGAATGATGGCTCCTACCACCACACCAACTTTCATGT
AGGCATTGTCCTATCCGCTAGTGTCTAAGTCGAGATTGACTGAGCATGGA
AGACGCGCCCAATCGTGGAATTCCGGAACAGGCGTGATAAACGCAGGACA
AAGAGCGATGTGCAGATATGACCACTTTTTTCAGCATTTTAGGACAAACC
TTGCACGATGGCCCCGCCCTGAAAAGCCTCACCGACACTTTCCCGACTTT
GCTGACACAATTCCGAACGCTTCCAGATGCTACGTGCCCCATATGGCGAT
GCCGTTCGGGAAAGCGGCTACCAGAGTGGATTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5907:1370..7102-

>mRNA_Ecto-sp13_S_contig5907.16433.1 ID=mRNA_Ecto-sp13_S_contig5907.16433.1|Name=mRNA_Ecto-sp13_S_contig5907.16433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1383bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5907:1370..7102- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGGGTTCACACGTACGGGGAGATGCATGGATCGCTTGAACGTGGA
AGACGAACTCGTTCAGGACCTTACCGATCCCAACTTCGTTTTGAGAAATG
TCGACCTGGCGTTTTCCTGCTGTGGCCATACCCCTGCAGTTGAGGAGGGC
TACCTCCGACGGAAGGAAGTGCAGAGGTTGATTTGTTCGCAGTGCATGTT
CGTGGCGGGGTTCCTTCTTCCCATGTTCAAGCAAATGACTGGTATCGACA
AGAAGTCCAAACGGATGGCTGTCGGCGGCCCGCTGATCGGAATCATCGGT
GCGGGTGGCCAACTAGGATCGGCCATAGCCCACACATTTCTTGACTACGG
CTGGAAGCCTTTCCGTTTGGCCGTGTCTGGCAGGGGCCAGAAAAAACTCC
GCAAGTTTGAGGCGCTAGGGGTCGGTGTGTTTGAAGACGTGTCGCTGCTG
GTCCGTGCCGTGCGGTTGGTGATAGTGGCCGTTGGACCCCAGCACGCTAG
ACAAGTCGGCTCGACGCTCGGAGATAATGGTACGGCATCAGCTTTGGTCA
TGAGCACCCTGGCGGGCATCAGCGAGGGGAGCCTAAAGCGAGTCTTGGGA
ACGGAGAATTTAATTCAGGCTAGGGTGGACATCGCTCGGCTTGACGTCAT
CGAAACGATGGGAAATCGAGGTCTGCGCGCAGACGGCCCAACGTCTAGGG
TAGGACAGGCAGAGTGCTCAAACGGCATCAAGGACCAATATGACGGGGAT
GCGGTGAAGGAGTATTCCGACGACTGGGGATGTAATGACGTCGCAACGTG
GCGGGCGGTGCACGAGCGCGCAGCGTGTCACTTCATACCTCATGCCCGGG
CGGTCGGGAAGATTATCGACACGATAGAATCTTTCTACGTCGAGCAGGGG
CTCGAACCTGTCCAGGCGCACCAAGCATGCCGAGATCGGTTGCTACCTTC
CGTCGAACCGGCGGCGCTCGGGACTAGGAGTCAACAGAGGGCTAACTTGC
CGCAAACTCTCTCATCTCTCGGCAAGGCGCGATCTGAACACACGGTTCCG
CTGTCTCAGCGCGATTCCCTCACGACCACGGGCAACCACGACCTGGACAC
GAGGGACAGTCCACATTCTCTGCAAGAACCAGAAAATGACCGCAAGTCTC
CCAGTGTTATTGCGTCGAGAGGGGCGCAGCCCTGCCAAGGCGAAGAGCCC
AACGCTCCGCCGGACAACCGCCTCGAGGCTGAACAAGAAGACGTAGGTAC
ATCGCCTCATCTAGGGGACGAAACGGTACAACCCATATGCGACACCCCCG
CTGGGCAAAAGGGTGTCAGTCACGAAAAGGTACGAGGCTGTCCAATCAGT
CGGGACGATGCGGATCGAATGAGGGCTCACTAG
back to top