prot_Ecto-sp13_S_contig5905.16430.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5905.16430.1
Unique Nameprot_Ecto-sp13_S_contig5905.16430.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5905.16430.1 vs. uniprot
Match: A0A6H5KDB8_9PHAE (Myosin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB8_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.790e-18
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 0 
Query:    1 MRQKIAYGELRDLRIKAKDVGNLKEDNDRLKAEILELRQAAAA-SKATAPASDKQVSSXXXX---------SGEEVDSLRREVVSLRAR 79
            MRQKIAYGELR LRIKAKDVGNLK +N+RLKAEIL LRQAAAA S    PASD+QV +             +G+EVDSLRREVV+LRAR
Sbjct:  912 MRQKIAYGELRGLRIKAKDVGNLKGENERLKAEILALRQAAAAASXXXXPASDEQVRAKDLVIICQVSSSSNGKEVDSLRREVVTLRAR 1000
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5905.16430.1 vs. uniprot
Match: D8LTS1_ECTSI (Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS1_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.120e-14
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:    2 RQKIAYGELRDLRIKAKDVGNLKEDNDRLKAEILELRQAAAASKATAPASDKQVSSXXXXSGEEVDSLRREVVSLRAR 79
            RQKIAYGELRDLRIKAKDVGNLK DN+RLKAEIL LR+AA  S A A A D++++S      +E DSLR EV  L+A+
Sbjct:  946 RQKIAYGELRDLRIKAKDVGNLKGDNERLKAEILVLREAA--SNAAAAAGDERLTSAM----KEADSLREEVEKLKAK 1017
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5905.16430.1 vs. uniprot
Match: A0A6H5KVF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.510e-13
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0 
Query:    1 MRQKIAYGELRDLRIKAKDVGNLKEDNDRLKAEILELRQAAAASKATAPASDKQVSSXXXXSGEEVDSLR 70
            MRQKIAYGELRDLR+KAKDVGNLK DN+RLKAEIL LRQAA  S A A A D++++S      +E DSLR
Sbjct:  146 MRQKIAYGELRDLRMKAKDVGNLKVDNERLKAEILVLRQAA--SNAAAAAGDERLTSAM----KEADSLR 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5905.16430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KDB8_9PHAE1.790e-1867.42Myosin motor domain-containing protein n=2 Tax=Ect... [more]
D8LTS1_ECTSI1.120e-1465.38Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5KVF9_9PHAE2.510e-1368.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5905contigEcto-sp13_S_contig5905:7396..7960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5905.16430.1mRNA_Ecto-sp13_S_contig5905.16430.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5905 7396..7960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5905.16430.1 ID=prot_Ecto-sp13_S_contig5905.16430.1|Name=mRNA_Ecto-sp13_S_contig5905.16430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MRQKIAYGELRDLRIKAKDVGNLKEDNDRLKAEILELRQAAAASKATAPA
SDKQVSSSSSSSGEEVDSLRREVVSLRAR
back to top